RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 SCGB1A1P11684 91 aa4.56□□□□□ -1.68
GINS3-205ENST00000564814 RPL37AP61513 92 aaKnown RBP4.56□□□□□ -1.68
GINS3-205ENST00000564814 HAMPP81172 84 aa4.56□□□□□ -1.68
GINS3-205ENST00000564814 C1orf137Q5JT78 98 aa4.56□□□□□ -1.68
GINS3-205ENST00000564814 FAM19A1Q7Z5A9 133 aa4.56□□□□□ -1.68
GINS3-205ENST00000564814 SMCR5Q8TEV8 140 aa4.56□□□□□ -1.68
GINS3-205ENST00000564814 SNCGO76070 127 aa4.55□□□□□ -1.68
GINS3-205ENST00000564814 GHRHP01286 108 aa4.55□□□□□ -1.68
GINS3-205ENST00000564814 SMR3BP02814 79 aaPredicted RBP4.55□□□□□ -1.68
GINS3-205ENST00000564814 SPRR1BP22528 89 aa4.55□□□□□ -1.68
GINS3-205ENST00000564814 UBE2AP49459 152 aa4.55□□□□□ -1.68
GINS3-205ENST00000564814 SPINK6Q6UWN8 80 aa4.55□□□□□ -1.68
GINS3-205ENST00000564814 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.55□□□□□ -1.68
GINS3-205ENST00000564814 LINC01600Q96MT4 127 aa4.55□□□□□ -1.68
GINS3-205ENST00000564814 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
GINS3-205ENST00000564814 MYCBP2O75592 4640 aa4.54□□□□□ -1.68
GINS3-205ENST00000564814 IGLV5-48A0A075B6I7 105 aa4.54□□□□□ -1.68
GINS3-205ENST00000564814 hADV29S1A0JD25 119 aa4.54□□□□□ -1.68
GINS3-205ENST00000564814 PRLHP81277 87 aa4.54□□□□□ -1.68
GINS3-205ENST00000564814 C21orf62-AS1Q17RA5 79 aa4.54□□□□□ -1.68
GINS3-205ENST00000564814 Q5VSD8 79 aa4.54□□□□□ -1.68
GINS3-205ENST00000564814 FAM218AQ96MZ4 157 aa4.54□□□□□ -1.68
GINS3-205ENST00000564814 LINC00483Q53H64 154 aa4.53□□□□□ -1.68
GINS3-205ENST00000564814 ZNF706Q9Y5V0 76 aaPredicted RBP4.53□□□□□ -1.68
GINS3-205ENST00000564814 DNAL4O96015 105 aa4.52□□□□□ -1.69
GINS3-205ENST00000564814 LINC01547P58512 204 aaPredicted RBP4.52□□□□□ -1.69
GINS3-205ENST00000564814 CLEC2BQ92478 149 aa4.52□□□□□ -1.69
GINS3-205ENST00000564814 ERC2-IT1O76042 136 aa4.51□□□□□ -1.69
GINS3-205ENST00000564814 Q6ZQY7 126 aa4.51□□□□□ -1.69
GINS3-205ENST00000564814 SPRR4Q96PI1 79 aa4.51□□□□□ -1.69
GINS3-205ENST00000564814 HIGD2AQ9BW72 106 aa4.51□□□□□ -1.69
GINS3-205ENST00000564814 KRTAP1-4P0C5Y4 121 aa4.5□□□□□ -1.69
GINS3-205ENST00000564814 FAM229BQ4G0N7 80 aa4.5□□□□□ -1.69
GINS3-205ENST00000564814 SRRM2Q9UQ35 2752 aaKnown RBP4.5□□□□□ -1.69
GINS3-205ENST00000564814 TEX49A0A1B0GTD5 131 aa4.49□□□□□ -1.69
GINS3-205ENST00000564814 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
GINS3-205ENST00000564814 TMEM256-PLSCR3K7ERE1 68 aa4.49□□□□□ -1.69
GINS3-205ENST00000564814 ACYP1P07311 99 aa4.49□□□□□ -1.69
GINS3-205ENST00000564814 Q8N377 158 aa4.49□□□□□ -1.69
GINS3-205ENST00000564814 ORMDL1Q9P0S3 153 aa4.49□□□□□ -1.69
GINS3-205ENST00000564814 IGLV8-61A0A075B6I0 122 aa4.48□□□□□ -1.69
GINS3-205ENST00000564814 FAM240AA0A1B0GVK7 77 aa4.48□□□□□ -1.69
GINS3-205ENST00000564814 CDIP1Q9H305 208 aa4.48□□□□□ -1.69
GINS3-205ENST00000564814 FAT4Q6V0I7 4981 aa4.48□□□□□ -1.69
GINS3-205ENST00000564814 FLG2Q5D862 2391 aaPredicted RBP4.48□□□□□ -1.69
GINS3-205ENST00000564814 BAALC-AS2P0C853 105 aa4.47□□□□□ -1.69
GINS3-205ENST00000564814 SMIM29Q86T20 159 aa4.47□□□□□ -1.69
GINS3-205ENST00000564814 PKHD1L1Q86WI1 4243 aa4.46□□□□□ -1.7
GINS3-205ENST00000564814 A0A1B0GV72 72 aa4.46□□□□□ -1.7
GINS3-205ENST00000564814 ST20-AS1Q8NBB2 130 aa4.46□□□□□ -1.7
GINS3-205ENST00000564814 FAT3Q8TDW7 4589 aa4.45□□□□□ -1.7
GINS3-205ENST00000564814 OBSCN-AS1Q96MR7 158 aa4.45□□□□□ -1.7
GINS3-205ENST00000564814 JMJD7-PLA2G4BH0Y9G9 81 aa4.44□□□□□ -1.7
GINS3-205ENST00000564814 MT-ATP8P03928 68 aa4.44□□□□□ -1.7
GINS3-205ENST00000564814 LAMTOR3Q9UHA4 124 aa4.44□□□□□ -1.7
GINS3-205ENST00000564814 OXTP01178 125 aa4.43□□□□□ -1.7
GINS3-205ENST00000564814 CRYGAP11844 174 aa4.43□□□□□ -1.7
GINS3-205ENST00000564814 NDUFV3P56181 108 aaKnown RBP4.43□□□□□ -1.7
GINS3-205ENST00000564814 Q6JHZ5 121 aa4.43□□□□□ -1.7
GINS3-205ENST00000564814 GAGE2AQ6NT46 116 aa4.43□□□□□ -1.7
GINS3-205ENST00000564814 Q6Q795 121 aa4.43□□□□□ -1.7
GINS3-205ENST00000564814 SSBP3-AS1Q7Z2R9 100 aa4.43□□□□□ -1.7
GINS3-205ENST00000564814 LRP1Q07954 4544 aaKnown RBP4.42□□□□□ -1.7
GINS3-205ENST00000564814 A0A087X002 238 aa4.42□□□□□ -1.7
GINS3-205ENST00000564814 TRBV7-4A0A0J9YYF1 115 aa4.42□□□□□ -1.7
GINS3-205ENST00000564814 KRTAP13-2Q52LG2 175 aa4.42□□□□□ -1.7
GINS3-205ENST00000564814 Q8NBF4 154 aa4.42□□□□□ -1.7
GINS3-205ENST00000564814 A0A1B0GW54 56 aa4.41□□□□□ -1.7
GINS3-205ENST00000564814 KRTAP29-1A8MX34 341 aaPredicted RBP4.41□□□□□ -1.7
GINS3-205ENST00000564814 F8WEM9 126 aa4.41□□□□□ -1.7
GINS3-205ENST00000564814 PDE6GP18545 87 aa4.41□□□□□ -1.7
GINS3-205ENST00000564814 KRTAP10-8P60410 259 aa4.41□□□□□ -1.7
GINS3-205ENST00000564814 CD164Q04900 197 aa4.41□□□□□ -1.7
GINS3-205ENST00000564814 RPS29P62273 56 aaKnown RBP4.4□□□□□ -1.71
GINS3-205ENST00000564814 LINC00643Q86TS7 51 aa4.4□□□□□ -1.71
GINS3-205ENST00000564814 DEFB105AQ8NG35 78 aa4.4□□□□□ -1.71
GINS3-205ENST00000564814 ANAPC13Q9BS18 74 aa4.4□□□□□ -1.71
GINS3-205ENST00000564814 LOC110117498A0A087WWA1 95 aa4.39□□□□□ -1.71
GINS3-205ENST00000564814 RBM3P98179 157 aaKnown RBP4.39□□□□□ -1.71
GINS3-205ENST00000564814 Q5XG85 94 aa4.39□□□□□ -1.71
GINS3-205ENST00000564814 C3orf22Q8N5N4 141 aa4.39□□□□□ -1.71
GINS3-205ENST00000564814 IMUPQ9GZP8 106 aa4.39□□□□□ -1.71
GINS3-205ENST00000564814 TRBV7-7A0A0K0K1E9 115 aa4.38□□□□□ -1.71
GINS3-205ENST00000564814 MT1HL1P0DM35 61 aa4.38□□□□□ -1.71
GINS3-205ENST00000564814 SPAG11AQ6PDA7 123 aa4.38□□□□□ -1.71
GINS3-205ENST00000564814 ANAPC11Q9NYG5 84 aa4.38□□□□□ -1.71
GINS3-205ENST00000564814 MOBPQ13875 183 aa4.37□□□□□ -1.71
GINS3-205ENST00000564814 IGFL1Q6UW32 110 aa4.37□□□□□ -1.71
GINS3-205ENST00000564814 PRR26Q8N8Z3 221 aa4.37□□□□□ -1.71
GINS3-205ENST00000564814 TYMSOSQ8TAI1 123 aa4.37□□□□□ -1.71
GINS3-205ENST00000564814 DSCR8Q96T75 97 aa4.37□□□□□ -1.71
GINS3-205ENST00000564814 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
GINS3-205ENST00000564814 C14orf132Q9NPU4 83 aa4.37□□□□□ -1.71
GINS3-205ENST00000564814 IGLV9-49A0A0B4J1Y8 123 aa4.36□□□□□ -1.71
GINS3-205ENST00000564814 SPINK1P00995 79 aa4.36□□□□□ -1.71
GINS3-205ENST00000564814 Q6ZQT0 140 aa4.36□□□□□ -1.71
GINS3-205ENST00000564814 CCKP06307 115 aa4.35□□□□□ -1.71
GINS3-205ENST00000564814 C9orf153Q5TBE3 101 aa4.35□□□□□ -1.71
GINS3-205ENST00000564814 A0A1W2PNM2 257 aa4.34□□□□□ -1.71
GINS3-205ENST00000564814 ASB16-AS1Q495Z4 193 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms