RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 S100A12P80511 92 aa4.94□□□□□ -1.62
HDGFL3-204ENST00000563790 ADAMTSL4-AS1Q5T5F5 129 aa4.94□□□□□ -1.62
HDGFL3-204ENST00000563790 SMIM29Q86T20 159 aa4.94□□□□□ -1.62
HDGFL3-204ENST00000563790 MAP1LC3CQ9BXW4 147 aa4.94□□□□□ -1.62
HDGFL3-204ENST00000563790 A0A0G2JQZ4 141 aa4.93□□□□□ -1.62
HDGFL3-204ENST00000563790 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
HDGFL3-204ENST00000563790 H7C2G1 150 aa4.92□□□□□ -1.62
HDGFL3-204ENST00000563790 LEPROTO15243 131 aa4.92□□□□□ -1.62
HDGFL3-204ENST00000563790 SNAPINO95295 136 aa4.92□□□□□ -1.62
HDGFL3-204ENST00000563790 APOC3P02656 99 aa4.92□□□□□ -1.62
HDGFL3-204ENST00000563790 S100A7L2Q5SY68 101 aa4.92□□□□□ -1.62
HDGFL3-204ENST00000563790 SVBPQ8N300 66 aa4.92□□□□□ -1.62
HDGFL3-204ENST00000563790 TRAPPC1Q9Y5R8 145 aa4.92□□□□□ -1.62
HDGFL3-204ENST00000563790 J3QQQ9 107 aa4.91□□□□□ -1.62
HDGFL3-204ENST00000563790 TRIAP1O43715 76 aa4.91□□□□□ -1.62
HDGFL3-204ENST00000563790 Q1RN00 199 aa4.9□□□□□ -1.63
HDGFL3-204ENST00000563790 CHCHD1Q96BP2 118 aaKnown RBP4.9□□□□□ -1.63
HDGFL3-204ENST00000563790 YPEL4Q96NS1 127 aa4.9□□□□□ -1.63
HDGFL3-204ENST00000563790 LITAFQ99732 161 aa4.9□□□□□ -1.63
HDGFL3-204ENST00000563790 LAMTOR3Q9UHA4 124 aa4.9□□□□□ -1.63
HDGFL3-204ENST00000563790 ELOF1P60002 83 aaKnown RBP4.89□□□□□ -1.63
HDGFL3-204ENST00000563790 SLC25A34Q6PIV7 304 aa4.89□□□□□ -1.63
HDGFL3-204ENST00000563790 PRO1933Q9H354 126 aa4.89□□□□□ -1.63
HDGFL3-204ENST00000563790 DHRS4-AS1Q9P1J3 65 aa4.89□□□□□ -1.63
HDGFL3-204ENST00000563790 NMUP48645 174 aa4.88□□□□□ -1.63
HDGFL3-204ENST00000563790 NPC2P61916 151 aa4.88□□□□□ -1.63
HDGFL3-204ENST00000563790 Q75L30 129 aa4.88□□□□□ -1.63
HDGFL3-204ENST00000563790 IGLV5-48A0A075B6I7 105 aa4.87□□□□□ -1.63
HDGFL3-204ENST00000563790 A0A0J9YXY3 114 aa4.87□□□□□ -1.63
HDGFL3-204ENST00000563790 MIEN1Q9BRT3 115 aa4.87□□□□□ -1.63
HDGFL3-204ENST00000563790 MPLKIPQ8TAP9 179 aa4.86□□□□□ -1.63
HDGFL3-204ENST00000563790 TEX49A0A1B0GTD5 131 aa4.85□□□□□ -1.63
HDGFL3-204ENST00000563790 AKR1D1P51857 326 aa4.85□□□□□ -1.63
HDGFL3-204ENST00000563790 Q5VV11 94 aa4.85□□□□□ -1.63
HDGFL3-204ENST00000563790 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.85□□□□□ -1.63
HDGFL3-204ENST00000563790 LINC00308Q8TCZ7 52 aa4.85□□□□□ -1.63
HDGFL3-204ENST00000563790 SPANXCQ9NY87 97 aa4.85□□□□□ -1.63
HDGFL3-204ENST00000563790 PLNP26678 52 aa4.84□□□□□ -1.63
HDGFL3-204ENST00000563790 MT4P47944 62 aa4.84□□□□□ -1.63
HDGFL3-204ENST00000563790 PMCHL2Q9BQD1 86 aa4.84□□□□□ -1.63
HDGFL3-204ENST00000563790 H0Y8G0 127 aa4.83□□□□□ -1.64
HDGFL3-204ENST00000563790 COX7BP24311 80 aa4.83□□□□□ -1.64
HDGFL3-204ENST00000563790 HINT1P49773 126 aaPredicted RBP4.83□□□□□ -1.64
HDGFL3-204ENST00000563790 DEFB105AQ8NG35 78 aa4.83□□□□□ -1.64
HDGFL3-204ENST00000563790 SPANXDQ9BXN6 97 aa4.83□□□□□ -1.64
HDGFL3-204ENST00000563790 DPM2O94777 84 aa4.82□□□□□ -1.64
HDGFL3-204ENST00000563790 TAL2Q16559 108 aa4.82□□□□□ -1.64
HDGFL3-204ENST00000563790 RBM12B-AS1Q9P1G2 102 aa4.82□□□□□ -1.64
HDGFL3-204ENST00000563790 CBY1Q9Y3M2 126 aa4.82□□□□□ -1.64
HDGFL3-204ENST00000563790 TRBV7-6A0A0J9YX20 115 aa4.81□□□□□ -1.64
HDGFL3-204ENST00000563790 E9PLD3 99 aa4.81□□□□□ -1.64
HDGFL3-204ENST00000563790 HSBP1O75506 76 aa4.81□□□□□ -1.64
HDGFL3-204ENST00000563790 TIMM17BO60830 172 aa4.8□□□□□ -1.64
HDGFL3-204ENST00000563790 LEPROTL1O95214 131 aa4.8□□□□□ -1.64
HDGFL3-204ENST00000563790 IGKCP01834 107 aa4.8□□□□□ -1.64
HDGFL3-204ENST00000563790 OR13C6PQ8NH95 151 aa4.8□□□□□ -1.64
HDGFL3-204ENST00000563790 OBSCN-AS1Q96MR7 158 aa4.8□□□□□ -1.64
HDGFL3-204ENST00000563790 SERF1AO75920 110 aa4.79□□□□□ -1.64
HDGFL3-204ENST00000563790 HERVK_113P61574 105 aa4.79□□□□□ -1.64
HDGFL3-204ENST00000563790 TCL1BO95988 128 aa4.78□□□□□ -1.64
HDGFL3-204ENST00000563790 TRGC2P03986 189 aa4.78□□□□□ -1.64
HDGFL3-204ENST00000563790 SLC7A5P1Q8MH63 180 aa4.78□□□□□ -1.64
HDGFL3-204ENST00000563790 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
HDGFL3-204ENST00000563790 KRTAP16-1A8MUX0 517 aa4.77□□□□□ -1.65
HDGFL3-204ENST00000563790 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
HDGFL3-204ENST00000563790 TTTY13Q9BZ97 58 aa4.77□□□□□ -1.65
HDGFL3-204ENST00000563790 MUC5BQ9HC84 5762 aaPredicted RBP4.76□□□□□ -1.65
HDGFL3-204ENST00000563790 A0A1B0GWB2 263 aa4.76□□□□□ -1.65
HDGFL3-204ENST00000563790 A8MUU9 505 aa4.76□□□□□ -1.65
HDGFL3-204ENST00000563790 HSPB8Q9UJY1 196 aa4.76□□□□□ -1.65
HDGFL3-204ENST00000563790 TRBV7-7A0A0K0K1E9 115 aa4.75□□□□□ -1.65
HDGFL3-204ENST00000563790 FABP4P15090 132 aa4.75□□□□□ -1.65
HDGFL3-204ENST00000563790 LINC00518Q8N0U6 118 aa4.75□□□□□ -1.65
HDGFL3-204ENST00000563790 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
HDGFL3-204ENST00000563790 COLCA2A8K830 154 aa4.74□□□□□ -1.65
HDGFL3-204ENST00000563790 PCP2Q8IVA1 136 aa4.74□□□□□ -1.65
HDGFL3-204ENST00000563790 IGFL1Q6UW32 110 aa4.73□□□□□ -1.65
HDGFL3-204ENST00000563790 HRES1P13985 223 aa4.72□□□□□ -1.65
HDGFL3-204ENST00000563790 ZNF815PA8K554 130 aa4.71□□□□□ -1.66
HDGFL3-204ENST00000563790 CLEC2BQ92478 149 aa4.71□□□□□ -1.66
HDGFL3-204ENST00000563790 LINC01545Q5VT33 79 aa4.7□□□□□ -1.66
HDGFL3-204ENST00000563790 Q96NJ1 140 aa4.7□□□□□ -1.66
HDGFL3-204ENST00000563790 SYS1-DBNDD2H3BUS1 97 aa4.69□□□□□ -1.66
HDGFL3-204ENST00000563790 Q6JHZ5 121 aa4.69□□□□□ -1.66
HDGFL3-204ENST00000563790 SMIM11BQ8TCY0 68 aa4.69□□□□□ -1.66
HDGFL3-204ENST00000563790 ZCCHC13Q8WW36 166 aaKnown RBP4.69□□□□□ -1.66
HDGFL3-204ENST00000563790 HIST1H2BKO60814 126 aa4.67□□□□□ -1.66
HDGFL3-204ENST00000563790 HIST1H2BJP06899 126 aa4.67□□□□□ -1.66
HDGFL3-204ENST00000563790 HIST1H2BOP23527 126 aa4.67□□□□□ -1.66
HDGFL3-204ENST00000563790 HIST1H2BBP33778 126 aa4.67□□□□□ -1.66
HDGFL3-204ENST00000563790 HIST1H2BDP58876 126 aa4.67□□□□□ -1.66
HDGFL3-204ENST00000563790 HIST1H2BCP62807 126 aa4.67□□□□□ -1.66
HDGFL3-204ENST00000563790 HIST2H2BEQ16778 126 aa4.67□□□□□ -1.66
HDGFL3-204ENST00000563790 OCIAD2Q56VL3 154 aa4.67□□□□□ -1.66
HDGFL3-204ENST00000563790 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.67□□□□□ -1.66
HDGFL3-204ENST00000563790 LINC00575Q6W349 94 aa4.67□□□□□ -1.66
HDGFL3-204ENST00000563790 HIST1H2BHQ93079 126 aa4.67□□□□□ -1.66
HDGFL3-204ENST00000563790 HIST1H2BNQ99877 126 aa4.67□□□□□ -1.66
HDGFL3-204ENST00000563790 HIST1H2BMQ99879 126 aa4.67□□□□□ -1.66
HDGFL3-204ENST00000563790 IMUPQ9GZP8 106 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms