RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 A0A0U1RRA0 63 aa4.35□□□□□ -1.71
SPG11-224ENST00000561268 CCDC179H3BU77 68 aa4.35□□□□□ -1.71
SPG11-224ENST00000561268 IGLV6-57P01721 117 aa4.35□□□□□ -1.71
SPG11-224ENST00000561268 RPL37AP61513 92 aaKnown RBP4.35□□□□□ -1.71
SPG11-224ENST00000561268 SMIM20Q8N5G0 67 aa4.35□□□□□ -1.71
SPG11-224ENST00000561268 CHCHD10Q8WYQ3 142 aaPredicted RBP4.35□□□□□ -1.71
SPG11-224ENST00000561268 hADV29S1A0JD25 119 aa4.34□□□□□ -1.71
SPG11-224ENST00000561268 NDUFC2-KCTD14E9PQ53 114 aa4.34□□□□□ -1.71
SPG11-224ENST00000561268 ZNF561-AS1K7EIQ3 104 aa4.34□□□□□ -1.71
SPG11-224ENST00000561268 MT1HL1P0DM35 61 aa4.34□□□□□ -1.71
SPG11-224ENST00000561268 XCL1P47992 114 aa4.34□□□□□ -1.71
SPG11-224ENST00000561268 LINC00575Q6W349 94 aa4.34□□□□□ -1.71
SPG11-224ENST00000561268 SERP2Q8N6R1 65 aa4.34□□□□□ -1.71
SPG11-224ENST00000561268 SS18L2Q9UHA2 77 aa4.34□□□□□ -1.71
SPG11-224ENST00000561268 CHTF8P0CG12 524 aa4.33□□□□□ -1.72
SPG11-224ENST00000561268 PFN2P35080 140 aa4.33□□□□□ -1.72
SPG11-224ENST00000561268 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.33□□□□□ -1.72
SPG11-224ENST00000561268 OR13C6PQ8NH95 151 aa4.33□□□□□ -1.72
SPG11-224ENST00000561268 C2orf48Q96LS8 159 aa4.33□□□□□ -1.72
SPG11-224ENST00000561268 TMEM258P61165 79 aa4.32□□□□□ -1.72
SPG11-224ENST00000561268 CXCL6P80162 114 aa4.32□□□□□ -1.72
SPG11-224ENST00000561268 C9orf153Q5TBE3 101 aa4.32□□□□□ -1.72
SPG11-224ENST00000561268 Q6ZRU5 148 aa4.32□□□□□ -1.72
SPG11-224ENST00000561268 UBL5Q9BZL1 73 aa4.32□□□□□ -1.72
SPG11-224ENST00000561268 C14orf132Q9NPU4 83 aa4.32□□□□□ -1.72
SPG11-224ENST00000561268 LINC00846Q9NV44 126 aa4.32□□□□□ -1.72
SPG11-224ENST00000561268 A0A096LNI7 61 aa4.31□□□□□ -1.72
SPG11-224ENST00000561268 RBM3P98179 157 aaKnown RBP4.31□□□□□ -1.72
SPG11-224ENST00000561268 SPAG11BQ08648 103 aa4.31□□□□□ -1.72
SPG11-224ENST00000561268 HIGD2BQ4VC39 106 aa4.31□□□□□ -1.72
SPG11-224ENST00000561268 PKIGQ9Y2B9 76 aa4.31□□□□□ -1.72
SPG11-224ENST00000561268 TNXBP22105 4242 aa4.3□□□□□ -1.72
SPG11-224ENST00000561268 IGKV3OR2-268A0A0C4DH90 116 aa4.3□□□□□ -1.72
SPG11-224ENST00000561268 PRR3P79522 188 aaKnown RBP4.3□□□□□ -1.72
SPG11-224ENST00000561268 Q6ZQT0 140 aa4.3□□□□□ -1.72
SPG11-224ENST00000561268 LOC107984640A0A0U1RRK4 108 aa4.29□□□□□ -1.72
SPG11-224ENST00000561268 NCR3O14931 201 aa4.29□□□□□ -1.72
SPG11-224ENST00000561268 ELOF1P60002 83 aaKnown RBP4.29□□□□□ -1.72
SPG11-224ENST00000561268 C6orf99Q4VX62 202 aa4.29□□□□□ -1.72
SPG11-224ENST00000561268 SERTAD4-AS1Q5TG53 156 aa4.29□□□□□ -1.72
SPG11-224ENST00000561268 LINC00474Q9P2X8 69 aa4.29□□□□□ -1.72
SPG11-224ENST00000561268 HMCN2Q8NDA2 5059 aa4.29□□□□□ -1.72
SPG11-224ENST00000561268 TRBV7-4A0A0J9YYF1 115 aa4.28□□□□□ -1.72
SPG11-224ENST00000561268 J3KT08 172 aa4.28□□□□□ -1.72
SPG11-224ENST00000561268 DIRC1Q969H9 104 aa4.28□□□□□ -1.72
SPG11-224ENST00000561268 DSCR8Q96T75 97 aa4.28□□□□□ -1.72
SPG11-224ENST00000561268 PLA2G2DQ9UNK4 145 aa4.28□□□□□ -1.72
SPG11-224ENST00000561268 TRAV23DV6A0A075B6W5 121 aa4.27□□□□□ -1.73
SPG11-224ENST00000561268 M0R378 163 aa4.27□□□□□ -1.73
SPG11-224ENST00000561268 TLX1NBP0CAT3 122 aa4.27□□□□□ -1.73
SPG11-224ENST00000561268 SYCNQ0VAF6 134 aa4.27□□□□□ -1.73
SPG11-224ENST00000561268 C9orf129Q5T035 196 aaKnown RBP4.27□□□□□ -1.73
SPG11-224ENST00000561268 C7orf33Q8WU49 177 aa4.27□□□□□ -1.73
SPG11-224ENST00000561268 V9GYY9 64 aa4.27□□□□□ -1.73
SPG11-224ENST00000561268 IGKV2-24A0A0C4DH68 120 aa4.26□□□□□ -1.73
SPG11-224ENST00000561268 NDUFC1O43677 76 aa4.26□□□□□ -1.73
SPG11-224ENST00000561268 ZNF73O43830 326 aaPredicted RBP4.26□□□□□ -1.73
SPG11-224ENST00000561268 ERC2-IT1O76042 136 aa4.26□□□□□ -1.73
SPG11-224ENST00000561268 TRAV7A0A075B6U4 112 aa4.25□□□□□ -1.73
SPG11-224ENST00000561268 VPREB1P12018 145 aa4.25□□□□□ -1.73
SPG11-224ENST00000561268 COX7BP24311 80 aa4.25□□□□□ -1.73
SPG11-224ENST00000561268 ATP5EP56381 51 aaPredicted RBP4.25□□□□□ -1.73
SPG11-224ENST00000561268 KLKP1Q107X0 134 aa4.25□□□□□ -1.73
SPG11-224ENST00000561268 UNQ6190/PRO20217Q6UXQ8 127 aa4.25□□□□□ -1.73
SPG11-224ENST00000561268 C6orf48Q9UBA6 75 aa4.25□□□□□ -1.73
SPG11-224ENST00000561268 IGLV5-37A0A075B6J1 123 aa4.24□□□□□ -1.73
SPG11-224ENST00000561268 KCNQ1DNQ9H478 68 aa4.24□□□□□ -1.73
SPG11-224ENST00000561268 A0A1W2PNN7 141 aa4.23□□□□□ -1.73
SPG11-224ENST00000561268 LINC01547P58512 204 aaPredicted RBP4.23□□□□□ -1.73
SPG11-224ENST00000561268 C10orf25Q5T742 122 aa4.23□□□□□ -1.73
SPG11-224ENST00000561268 SPINK6Q6UWN8 80 aa4.23□□□□□ -1.73
SPG11-224ENST00000561268 Q6ZQY7 126 aa4.23□□□□□ -1.73
SPG11-224ENST00000561268 Q6ZRP5 223 aa4.23□□□□□ -1.73
SPG11-224ENST00000561268 Q8NDZ9 215 aa4.23□□□□□ -1.73
SPG11-224ENST00000561268 CAMK2N2Q96S95 79 aa4.23□□□□□ -1.73
SPG11-224ENST00000561268 LAMTOR3Q9UHA4 124 aa4.23□□□□□ -1.73
SPG11-224ENST00000561268 IGLV5-48A0A075B6I7 105 aa4.22□□□□□ -1.73
SPG11-224ENST00000561268 IGKV3D-7A0A0C4DH55 119 aa4.22□□□□□ -1.73
SPG11-224ENST00000561268 H3BS24 57 aa4.22□□□□□ -1.73
SPG11-224ENST00000561268 C9orf116Q5BN46 136 aaPredicted RBP4.22□□□□□ -1.73
SPG11-224ENST00000561268 Q6ZVQ6 151 aa4.22□□□□□ -1.73
SPG11-224ENST00000561268 KRTAP7-1Q8IUC3 87 aa4.22□□□□□ -1.73
SPG11-224ENST00000561268 DHRS4-AS1Q9P1J3 65 aa4.22□□□□□ -1.73
SPG11-224ENST00000561268 KRTAP10-8P60410 259 aa4.21□□□□□ -1.74
SPG11-224ENST00000561268 PRO0628Q9UI54 55 aa4.21□□□□□ -1.74
SPG11-224ENST00000561268 PRYO14603 147 aa4.2□□□□□ -1.74
SPG11-224ENST00000561268 DPH3Q96FX2 82 aa4.2□□□□□ -1.74
SPG11-224ENST00000561268 PSORS1C2Q9UIG4 136 aa4.2□□□□□ -1.74
SPG11-224ENST00000561268 A0A087WVE0 104 aa4.19□□□□□ -1.74
SPG11-224ENST00000561268 SPRR1AP35321 89 aa4.19□□□□□ -1.74
SPG11-224ENST00000561268 REG3GQ6UW15 175 aa4.19□□□□□ -1.74
SPG11-224ENST00000561268 KRTAP11-1Q8IUC1 163 aa4.19□□□□□ -1.74
SPG11-224ENST00000561268 RPL37AP8A6NKH3 93 aa4.18□□□□□ -1.74
SPG11-224ENST00000561268 PHF5AQ7RTV0 110 aaKnown RBP4.18□□□□□ -1.74
SPG11-224ENST00000561268 LRP2P98164 4655 aa4.18□□□□□ -1.74
SPG11-224ENST00000561268 FAM168BA1KXE4 195 aa4.17□□□□□ -1.74
SPG11-224ENST00000561268 KRTAP4-16G5E9R7 235 aaPredicted RBP4.17□□□□□ -1.74
SPG11-224ENST00000561268 KRTAP1-4P0C5Y4 121 aa4.17□□□□□ -1.74
SPG11-224ENST00000561268 FAM19A5Q7Z5A7 132 aaPredicted RBP4.17□□□□□ -1.74
SPG11-224ENST00000561268 NKAPP1Q8N9T2 125 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms