RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 K7EQZ3 153 aa6.28□□□□□ -1.4
LRRC28-216ENST00000559819 MDFIQ99750 246 aa6.28□□□□□ -1.4
LRRC28-216ENST00000559819 A0A1B0GW54 56 aa6.27□□□□□ -1.41
LRRC28-216ENST00000559819 PANO1I0J062 215 aa6.27□□□□□ -1.41
LRRC28-216ENST00000559819 TENM2Q9NT68 2774 aa6.26□□□□□ -1.41
LRRC28-216ENST00000559819 STARD9Q9P2P6 4700 aa6.26□□□□□ -1.41
LRRC28-216ENST00000559819 EPM2AB3EWF7 344 aa6.26□□□□□ -1.41
LRRC28-216ENST00000559819 LRCOL1A6NCL2 159 aa6.26□□□□□ -1.41
LRRC28-216ENST00000559819 UBE2AP49459 152 aa6.26□□□□□ -1.41
LRRC28-216ENST00000559819 V9GYY9 64 aa6.26□□□□□ -1.41
LRRC28-216ENST00000559819 A0A0U1RQV1 116 aa6.25□□□□□ -1.41
LRRC28-216ENST00000559819 C14orf177Q52M58 125 aa6.25□□□□□ -1.41
LRRC28-216ENST00000559819 A0A087WSZ3 146 aa6.25□□□□□ -1.41
LRRC28-216ENST00000559819 C4orf26Q17RF5 130 aa6.25□□□□□ -1.41
LRRC28-216ENST00000559819 Q5XG85 94 aa6.25□□□□□ -1.41
LRRC28-216ENST00000559819 B9D2Q9BPU9 175 aa6.25□□□□□ -1.41
LRRC28-216ENST00000559819 NBDYA0A0U1RRE5 68 aa6.24□□□□□ -1.41
LRRC28-216ENST00000559819 SERP1Q9Y6X1 66 aa6.24□□□□□ -1.41
LRRC28-216ENST00000559819 C9orf163Q8N9P6 203 aa6.24□□□□□ -1.41
LRRC28-216ENST00000559819 SRRM2Q9UQ35 2752 aaKnown RBP6.23□□□□□ -1.41
LRRC28-216ENST00000559819 NDUFC1O43677 76 aa6.23□□□□□ -1.41
LRRC28-216ENST00000559819 IGLV8-61A0A075B6I0 122 aa6.22□□□□□ -1.41
LRRC28-216ENST00000559819 RPL37AP61513 92 aaKnown RBP6.22□□□□□ -1.41
LRRC28-216ENST00000559819 VPS13DQ5THJ4 4388 aa6.22□□□□□ -1.41
LRRC28-216ENST00000559819 Q6ZRN7 208 aaPredicted RBP6.22□□□□□ -1.41
LRRC28-216ENST00000559819 HCG22E2RYF7 251 aa6.2□□□□□ -1.42
LRRC28-216ENST00000559819 HRCT1Q6UXD1 115 aa6.2□□□□□ -1.42
LRRC28-216ENST00000559819 WFDC13Q8IUB5 93 aa6.19□□□□□ -1.42
LRRC28-216ENST00000559819 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-216ENST00000559819 PRKDCP78527 4128 aaKnown RBP6.18□□□□□ -1.42
LRRC28-216ENST00000559819 HECTD4Q9Y4D8 3996 aa6.18□□□□□ -1.42
LRRC28-216ENST00000559819 NUPR2A6NF83 97 aa6.18□□□□□ -1.42
LRRC28-216ENST00000559819 SPRR1BP22528 89 aa6.18□□□□□ -1.42
LRRC28-216ENST00000559819 DNAH2Q9P225 4427 aa6.18□□□□□ -1.42
LRRC28-216ENST00000559819 H0Y9J4 135 aa6.18□□□□□ -1.42
LRRC28-216ENST00000559819 C4orf48Q5BLP8 95 aa6.18□□□□□ -1.42
LRRC28-216ENST00000559819 LCE6AA0A183 80 aa6.17□□□□□ -1.42
LRRC28-216ENST00000559819 LINC00474Q9P2X8 69 aa6.17□□□□□ -1.42
LRRC28-216ENST00000559819 PRO0628Q9UI54 55 aa6.16□□□□□ -1.42
LRRC28-216ENST00000559819 ATP5EP56381 51 aaPredicted RBP6.16□□□□□ -1.42
LRRC28-216ENST00000559819 FAM229BQ4G0N7 80 aa6.16□□□□□ -1.42
LRRC28-216ENST00000559819 FP248Q71RG6 208 aaPredicted RBP6.16□□□□□ -1.42
LRRC28-216ENST00000559819 KRTAP13-1Q8IUC0 172 aa6.16□□□□□ -1.42
LRRC28-216ENST00000559819 KMT2AQ03164 3969 aa6.15□□□□□ -1.42
LRRC28-216ENST00000559819 DNAH17Q9UFH2 4485 aa6.15□□□□□ -1.43
LRRC28-216ENST00000559819 SPACA4Q8TDM5 124 aa6.15□□□□□ -1.43
LRRC28-216ENST00000559819 ZCCHC13Q8WW36 166 aaKnown RBP6.14□□□□□ -1.43
LRRC28-216ENST00000559819 PKIGQ9Y2B9 76 aa6.13□□□□□ -1.43
LRRC28-216ENST00000559819 DNAH8Q96JB1 4490 aa6.13□□□□□ -1.43
LRRC28-216ENST00000559819 A0A087WTM6 91 aa6.13□□□□□ -1.43
LRRC28-216ENST00000559819 SMIM26A0A096LP01 95 aa6.13□□□□□ -1.43
LRRC28-216ENST00000559819 IGLV9-49A0A0B4J1Y8 123 aa6.13□□□□□ -1.43
LRRC28-216ENST00000559819 LINC00472Q9H8W2 130 aa6.12□□□□□ -1.43
LRRC28-216ENST00000559819 FRAS1Q86XX4 4008 aa6.12□□□□□ -1.43
LRRC28-216ENST00000559819 KRTAP29-1A8MX34 341 aaPredicted RBP6.11□□□□□ -1.43
LRRC28-216ENST00000559819 PRR15Q8IV56 129 aa6.11□□□□□ -1.43
LRRC28-216ENST00000559819 RTL8CO15255 209 aa6.1□□□□□ -1.43
LRRC28-216ENST00000559819 PRR4Q16378 134 aa6.1□□□□□ -1.43
LRRC28-216ENST00000559819 CASC2Q6XLA1 102 aa6.1□□□□□ -1.43
LRRC28-216ENST00000559819 LINC00336Q6ZUF6 198 aa6.1□□□□□ -1.43
LRRC28-216ENST00000559819 A8MWP4 228 aa6.09□□□□□ -1.43
LRRC28-216ENST00000559819 ANAPC11Q9NYG5 84 aa6.09□□□□□ -1.43
LRRC28-216ENST00000559819 DNHD1Q96M86 4753 aa6.08□□□□□ -1.44
LRRC28-216ENST00000559819 MPLKIPQ8TAP9 179 aa6.08□□□□□ -1.44
LRRC28-216ENST00000559819 PSORS1C2Q9UIG4 136 aa6.08□□□□□ -1.44
LRRC28-216ENST00000559819 C1orf195Q5TG92 126 aa6.07□□□□□ -1.44
LRRC28-216ENST00000559819 LINC00208Q96KT6 92 aa6.07□□□□□ -1.44
LRRC28-216ENST00000559819 MMP24-AS1A0A0U1RRL7 71 aa6.05□□□□□ -1.44
LRRC28-216ENST00000559819 MP68P56378 58 aa6.05□□□□□ -1.44
LRRC28-216ENST00000559819 Q6ZR54 194 aa6.05□□□□□ -1.44
LRRC28-216ENST00000559819 Q96NJ1 140 aa6.05□□□□□ -1.44
LRRC28-216ENST00000559819 hDV103S1A0JD37 113 aa6.05□□□□□ -1.44
LRRC28-216ENST00000559819 H0Y9P7 68 aa6.05□□□□□ -1.44
LRRC28-216ENST00000559819 MOBPQ13875 183 aa6.05□□□□□ -1.44
LRRC28-216ENST00000559819 C1orf64Q8NEQ6 169 aa6.05□□□□□ -1.44
LRRC28-216ENST00000559819 IGLV5-52A0A0A0MRZ9 124 aa6.05□□□□□ -1.44
LRRC28-216ENST00000559819 LINC00483Q53H64 154 aa6.05□□□□□ -1.44
LRRC28-216ENST00000559819 TRAV22A0A0B4J277 110 aa6.04□□□□□ -1.44
LRRC28-216ENST00000559819 MEGF8Q7Z7M0 2845 aa6.04□□□□□ -1.44
LRRC28-216ENST00000559819 DNAH5Q8TE73 4624 aa6.04□□□□□ -1.44
LRRC28-216ENST00000559819 WWC2-AS2Q96NR7 200 aa6.04□□□□□ -1.44
LRRC28-216ENST00000559819 PLAC8Q9NZF1 115 aa6.03□□□□□ -1.44
LRRC28-216ENST00000559819 DNAH11Q96DT5 4516 aa6.02□□□□□ -1.45
LRRC28-216ENST00000559819 ALMS1Q8TCU4 4167 aa6.02□□□□□ -1.45
LRRC28-216ENST00000559819 FBN3Q75N90 2809 aa6.01□□□□□ -1.45
LRRC28-216ENST00000559819 ZNF861PO60384 105 aa6.01□□□□□ -1.45
LRRC28-216ENST00000559819 NDUFB1O75438 58 aa6.01□□□□□ -1.45
LRRC28-216ENST00000559819 DNAH6Q9C0G6 4158 aa6.01□□□□□ -1.45
LRRC28-216ENST00000559819 ZNF706Q9Y5V0 76 aaPredicted RBP6□□□□□ -1.45
LRRC28-216ENST00000559819 C1orf134Q5TEV5 83 aa5.99□□□□□ -1.45
LRRC28-216ENST00000559819 CYP4F30PQ9H0H9 118 aa5.99□□□□□ -1.45
LRRC28-216ENST00000559819 IGHV6-1A0A0B4J1U7 121 aa5.99□□□□□ -1.45
LRRC28-216ENST00000559819 LY6G6CO95867 125 aa5.99□□□□□ -1.45
LRRC28-216ENST00000559819 C8orf17Q9NRJ1 99 aa5.98□□□□□ -1.45
LRRC28-216ENST00000559819 TGP01266 2768 aa5.97□□□□□ -1.45
LRRC28-216ENST00000559819 A0A087X002 238 aa5.96□□□□□ -1.46
LRRC28-216ENST00000559819 NOTCH2NLQ7Z3S9 236 aa5.96□□□□□ -1.46
LRRC28-216ENST00000559819 IGLV7-43P04211 117 aa5.96□□□□□ -1.46
LRRC28-216ENST00000559819 ASB16-AS1Q495Z4 193 aa5.96□□□□□ -1.46
LRRC28-216ENST00000559819 A0A1B0GVX0 72 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms