RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 ASB16-AS1Q495Z4 193 aa5.66□□□□□ -1.5
USP3-207ENST00000558218 PCP2Q8IVA1 136 aa5.66□□□□□ -1.5
USP3-207ENST00000558218 MUSTN1Q8IVN3 82 aa5.66□□□□□ -1.5
USP3-207ENST00000558218 LIMD2Q9BT23 127 aa5.66□□□□□ -1.5
USP3-207ENST00000558218 A6NDN8 102 aa5.65□□□□□ -1.5
USP3-207ENST00000558218 S100A2P29034 98 aa5.65□□□□□ -1.5
USP3-207ENST00000558218 SEC61BP60468 96 aaKnown RBP5.65□□□□□ -1.5
USP3-207ENST00000558218 ATOH7Q8N100 152 aa5.65□□□□□ -1.5
USP3-207ENST00000558218 HSBP1L1C9JCN9 74 aa5.64□□□□□ -1.51
USP3-207ENST00000558218 HIST3H2BBQ8N257 126 aa5.64□□□□□ -1.51
USP3-207ENST00000558218 PRO1933Q9H354 126 aa5.64□□□□□ -1.51
USP3-207ENST00000558218 NHP2Q9NX24 153 aaKnown RBP5.64□□□□□ -1.51
USP3-207ENST00000558218 MUC2Q02817 5179 aa5.64□□□□□ -1.51
USP3-207ENST00000558218 IGLV5-48A0A075B6I7 105 aa5.63□□□□□ -1.51
USP3-207ENST00000558218 HIST1H2BLQ99880 126 aa5.63□□□□□ -1.51
USP3-207ENST00000558218 FAT4Q6V0I7 4981 aa5.62□□□□□ -1.51
USP3-207ENST00000558218 S100A6P06703 90 aa5.62□□□□□ -1.51
USP3-207ENST00000558218 VAMP3Q15836 100 aa5.62□□□□□ -1.51
USP3-207ENST00000558218 Q5XG85 94 aa5.62□□□□□ -1.51
USP3-207ENST00000558218 DEFB105AQ8NG35 78 aa5.61□□□□□ -1.51
USP3-207ENST00000558218 SMIM29Q86T20 159 aa5.6□□□□□ -1.51
USP3-207ENST00000558218 SMIM11BQ8TCY0 68 aa5.6□□□□□ -1.51
USP3-207ENST00000558218 H7C2G1 150 aa5.59□□□□□ -1.51
USP3-207ENST00000558218 LINC01547P58512 204 aaPredicted RBP5.59□□□□□ -1.51
USP3-207ENST00000558218 Q1RN00 199 aa5.59□□□□□ -1.51
USP3-207ENST00000558218 HRCT1Q6UXD1 115 aa5.57□□□□□ -1.52
USP3-207ENST00000558218 MUC17Q685J3 4493 aa5.56□□□□□ -1.52
USP3-207ENST00000558218 DLEU1O43261 78 aa5.56□□□□□ -1.52
USP3-207ENST00000558218 LINC00575Q6W349 94 aa5.56□□□□□ -1.52
USP3-207ENST00000558218 SCGB1D1O95968 90 aa5.55□□□□□ -1.52
USP3-207ENST00000558218 hADV29S1A0JD25 119 aa5.54□□□□□ -1.52
USP3-207ENST00000558218 COX8AP10176 69 aa5.54□□□□□ -1.52
USP3-207ENST00000558218 BVES-AS1Q5T3Y7 98 aa5.54□□□□□ -1.52
USP3-207ENST00000558218 PPDPFLQ8WWR9 84 aa5.54□□□□□ -1.52
USP3-207ENST00000558218 F8WEM9 126 aa5.53□□□□□ -1.52
USP3-207ENST00000558218 TRIAP1O43715 76 aa5.53□□□□□ -1.52
USP3-207ENST00000558218 TCL1BO95988 128 aa5.53□□□□□ -1.52
USP3-207ENST00000558218 Q6JHZ5 121 aa5.53□□□□□ -1.52
USP3-207ENST00000558218 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.53□□□□□ -1.52
USP3-207ENST00000558218 HIST1H4GQ99525 98 aa5.53□□□□□ -1.52
USP3-207ENST00000558218 IGLV8-61A0A075B6I0 122 aa5.52□□□□□ -1.53
USP3-207ENST00000558218 C1orf195Q5TG92 126 aa5.52□□□□□ -1.53
USP3-207ENST00000558218 Q6ZQY7 126 aa5.51□□□□□ -1.53
USP3-207ENST00000558218 KRTAP4-1Q9BYQ7 146 aa5.51□□□□□ -1.53
USP3-207ENST00000558218 SNCGO76070 127 aa5.5□□□□□ -1.53
USP3-207ENST00000558218 OCIAD2Q56VL3 154 aa5.5□□□□□ -1.53
USP3-207ENST00000558218 HIGD1BQ9P298 99 aa5.5□□□□□ -1.53
USP3-207ENST00000558218 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
USP3-207ENST00000558218 H0YGX0 51 aa5.49□□□□□ -1.53
USP3-207ENST00000558218 FSIP2Q5CZC0 6907 aa5.48□□□□□ -1.53
USP3-207ENST00000558218 C9orf92A6NGG3 77 aa5.48□□□□□ -1.53
USP3-207ENST00000558218 CLEC2BQ92478 149 aa5.48□□□□□ -1.53
USP3-207ENST00000558218 SNHG12Q9BXW3 62 aa5.48□□□□□ -1.53
USP3-207ENST00000558218 A0A0G2JQZ4 141 aa5.47□□□□□ -1.53
USP3-207ENST00000558218 CFC1BP0CG36 223 aa5.47□□□□□ -1.53
USP3-207ENST00000558218 CFC1P0CG37 223 aa5.47□□□□□ -1.53
USP3-207ENST00000558218 PCOTHQ58A44 107 aa5.47□□□□□ -1.53
USP3-207ENST00000558218 A0A0B4J2C4 111 aa5.46□□□□□ -1.54
USP3-207ENST00000558218 TRBV7-7A0A0K0K1E9 115 aa5.46□□□□□ -1.54
USP3-207ENST00000558218 IGFL1Q6UW32 110 aa5.46□□□□□ -1.54
USP3-207ENST00000558218 RAB37Q96AX2 223 aa5.46□□□□□ -1.54
USP3-207ENST00000558218 C14orf144Q96I85 54 aa5.46□□□□□ -1.54
USP3-207ENST00000558218 SPATA45Q537H7 98 aa5.45□□□□□ -1.54
USP3-207ENST00000558218 C12orf57Q99622 126 aa5.45□□□□□ -1.54
USP3-207ENST00000558218 VAMP8Q9BV40 100 aa5.45□□□□□ -1.54
USP3-207ENST00000558218 A0A1B0GX51 115 aa5.44□□□□□ -1.54
USP3-207ENST00000558218 PAM16Q9Y3D7 125 aa5.44□□□□□ -1.54
USP3-207ENST00000558218 RPL37P61927 97 aaKnown RBP5.43□□□□□ -1.54
USP3-207ENST00000558218 Q6Q795 121 aa5.43□□□□□ -1.54
USP3-207ENST00000558218 C2orf91Q6ZV80 131 aa5.42□□□□□ -1.54
USP3-207ENST00000558218 CEND1Q8N111 149 aa5.42□□□□□ -1.54
USP3-207ENST00000558218 PRO1854Q9UHT4 67 aa5.42□□□□□ -1.54
USP3-207ENST00000558218 SS18L2Q9UHA2 77 aa5.41□□□□□ -1.54
USP3-207ENST00000558218 LST1O00453 97 aa5.4□□□□□ -1.54
USP3-207ENST00000558218 NDUFV3P56181 108 aaKnown RBP5.4□□□□□ -1.54
USP3-207ENST00000558218 TEN1Q86WV5 123 aa5.4□□□□□ -1.54
USP3-207ENST00000558218 H3BQ85 93 aa5.39□□□□□ -1.55
USP3-207ENST00000558218 KRTAP19-2Q3LHN2 52 aa5.39□□□□□ -1.55
USP3-207ENST00000558218 FAM218AQ96MZ4 157 aa5.38□□□□□ -1.55
USP3-207ENST00000558218 H3BUT2 72 aa5.37□□□□□ -1.55
USP3-207ENST00000558218 H3BMG7 143 aa5.36□□□□□ -1.55
USP3-207ENST00000558218 Q75L30 129 aa5.36□□□□□ -1.55
USP3-207ENST00000558218 FXYD2P54710 66 aa5.35□□□□□ -1.55
USP3-207ENST00000558218 ATP11AUNQ6ZP68 121 aa5.35□□□□□ -1.55
USP3-207ENST00000558218 COX6CP09669 75 aa5.34□□□□□ -1.55
USP3-207ENST00000558218 FABP2P12104 132 aa5.34□□□□□ -1.55
USP3-207ENST00000558218 MT1HP80294 61 aa5.34□□□□□ -1.55
USP3-207ENST00000558218 HSD52Q0P140 79 aa5.34□□□□□ -1.55
USP3-207ENST00000558218 OBSCN-AS1Q96MR7 158 aa5.34□□□□□ -1.55
USP3-207ENST00000558218 TMEM256-PLSCR3K7ERE1 68 aa5.33□□□□□ -1.56
USP3-207ENST00000558218 PYY3Q5JQD4 70 aa5.33□□□□□ -1.56
USP3-207ENST00000558218 DNAL4O96015 105 aa5.32□□□□□ -1.56
USP3-207ENST00000558218 ORMDL1Q9P0S3 153 aa5.32□□□□□ -1.56
USP3-207ENST00000558218 A0A087WSZ3 146 aa5.31□□□□□ -1.56
USP3-207ENST00000558218 PSMB2P49721 201 aa5.31□□□□□ -1.56
USP3-207ENST00000558218 ANKRD29Q8N6D5 301 aa5.31□□□□□ -1.56
USP3-207ENST00000558218 Q96NJ1 140 aa5.31□□□□□ -1.56
USP3-207ENST00000558218 UQCR10Q9UDW1 63 aa5.31□□□□□ -1.56
USP3-207ENST00000558218 TRBV7-4A0A0J9YYF1 115 aa5.3□□□□□ -1.56
USP3-207ENST00000558218 C20orf166-AS1Q96NR2 134 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms