RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-223ENST00000557294 NEBP20929 6669 aa9.08□□□□□ -0.96
PRKCH-223ENST00000557294 A4D1N5 150 aa9.07□□□□□ -0.96
PRKCH-223ENST00000557294 F8WEM9 126 aa9.07□□□□□ -0.96
PRKCH-223ENST00000557294 HIST1H2BKO60814 126 aa9.07□□□□□ -0.96
PRKCH-223ENST00000557294 HIST1H2BJP06899 126 aa9.07□□□□□ -0.96
PRKCH-223ENST00000557294 HIST1H2BOP23527 126 aa9.07□□□□□ -0.96
PRKCH-223ENST00000557294 HIST1H2BBP33778 126 aa9.07□□□□□ -0.96
PRKCH-223ENST00000557294 HIST1H2BDP58876 126 aa9.07□□□□□ -0.96
PRKCH-223ENST00000557294 HIST1H2BCP62807 126 aa9.07□□□□□ -0.96
PRKCH-223ENST00000557294 HIST2H2BEQ16778 126 aa9.07□□□□□ -0.96
PRKCH-223ENST00000557294 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.07□□□□□ -0.96
PRKCH-223ENST00000557294 HIST1H2BHQ93079 126 aa9.07□□□□□ -0.96
PRKCH-223ENST00000557294 HIST1H2BNQ99877 126 aa9.07□□□□□ -0.96
PRKCH-223ENST00000557294 HIST1H2BMQ99879 126 aa9.07□□□□□ -0.96
PRKCH-223ENST00000557294 Q6JHZ5 121 aa9.06□□□□□ -0.96
PRKCH-223ENST00000557294 PET117Q6UWS5 81 aa9.05□□□□□ -0.96
PRKCH-223ENST00000557294 NHP2Q9NX24 153 aaKnown RBP9.05□□□□□ -0.96
PRKCH-223ENST00000557294 LINC01545Q5VT33 79 aa9.04□□□□□ -0.96
PRKCH-223ENST00000557294 CLEC2BQ92478 149 aa9.04□□□□□ -0.96
PRKCH-223ENST00000557294 LST1O00453 97 aa9.03□□□□□ -0.96
PRKCH-223ENST00000557294 MPLKIPQ8TAP9 179 aa9.02□□□□□ -0.97
PRKCH-223ENST00000557294 RBM12B-AS1Q9P1G2 102 aa9.02□□□□□ -0.97
PRKCH-223ENST00000557294 ZNF815PA8K554 130 aa9.01□□□□□ -0.97
PRKCH-223ENST00000557294 KRTAP16-1A8MUX0 517 aa9□□□□□ -0.97
PRKCH-223ENST00000557294 A6NDN8 102 aa8.99□□□□□ -0.97
PRKCH-223ENST00000557294 C3orf79P0CE67 100 aa8.98□□□□□ -0.97
PRKCH-223ENST00000557294 OCIAD2Q56VL3 154 aa8.98□□□□□ -0.97
PRKCH-223ENST00000557294 TRAV13-2A0A0B4J235 113 aa8.97□□□□□ -0.97
PRKCH-223ENST00000557294 HRES1P13985 223 aa8.97□□□□□ -0.97
PRKCH-223ENST00000557294 KRTDAPP60985 99 aa8.96□□□□□ -0.98
PRKCH-223ENST00000557294 TTTY13Q9BZ97 58 aa8.96□□□□□ -0.98
PRKCH-223ENST00000557294 MUC12Q9UKN1 5478 aa8.96□□□□□ -0.98
PRKCH-223ENST00000557294 COA6Q5JTJ3 125 aaKnown RBP8.95□□□□□ -0.98
PRKCH-223ENST00000557294 SCGB1D4Q6XE38 83 aa8.93□□□□□ -0.98
PRKCH-223ENST00000557294 COPS9Q8WXC6 57 aa8.92□□□□□ -0.98
PRKCH-223ENST00000557294 SMIM11BQ8TCY0 68 aa8.91□□□□□ -0.98
PRKCH-223ENST00000557294 IFITM1P13164 125 aa8.89□□□□□ -0.99
PRKCH-223ENST00000557294 KRTAP20-1Q3LI63 56 aa8.89□□□□□ -0.99
PRKCH-223ENST00000557294 LINC00575Q6W349 94 aa8.89□□□□□ -0.99
PRKCH-223ENST00000557294 Q6ZQY7 126 aa8.89□□□□□ -0.99
PRKCH-223ENST00000557294 VAMP3Q15836 100 aa8.88□□□□□ -0.99
PRKCH-223ENST00000557294 ANKRD39Q53RE8 183 aa8.88□□□□□ -0.99
PRKCH-223ENST00000557294 Q6ZVH6 145 aa8.88□□□□□ -0.99
PRKCH-223ENST00000557294 NOTCH2NLQ7Z3S9 236 aa8.88□□□□□ -0.99
PRKCH-223ENST00000557294 SS18L2Q9UHA2 77 aa8.88□□□□□ -0.99
PRKCH-223ENST00000557294 DSCR10P59022 87 aa8.87□□□□□ -0.99
PRKCH-223ENST00000557294 hADV29S1A0JD25 119 aa8.86□□□□□ -0.99
PRKCH-223ENST00000557294 ATOH7Q8N100 152 aa8.86□□□□□ -0.99
PRKCH-223ENST00000557294 MUSTN1Q8IVN3 82 aa8.85□□□□□ -0.99
PRKCH-223ENST00000557294 MTURNQ8N3F0 131 aa8.83□□□□□ -1
PRKCH-223ENST00000557294 SNRPEP62304 92 aaKnown RBP8.82□□□□□ -1
PRKCH-223ENST00000557294 A8MWP4 228 aa8.81□□□□□ -1
PRKCH-223ENST00000557294 SCGB1D1O95968 90 aa8.81□□□□□ -1
PRKCH-223ENST00000557294 H3BUT2 72 aa8.8□□□□□ -1
PRKCH-223ENST00000557294 PPDPFLQ8WWR9 84 aa8.8□□□□□ -1
PRKCH-223ENST00000557294 SNHG12Q9BXW3 62 aa8.8□□□□□ -1
PRKCH-223ENST00000557294 LINC00313P59037 77 aa8.79□□□□□ -1
PRKCH-223ENST00000557294 Q8N9P0 234 aaPredicted RBP8.79□□□□□ -1
PRKCH-223ENST00000557294 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.78□□□□□ -1
PRKCH-223ENST00000557294 TEN1Q86WV5 123 aa8.77□□□□□ -1.01
PRKCH-223ENST00000557294 S100A2P29034 98 aa8.76□□□□□ -1.01
PRKCH-223ENST00000557294 HSBP1L1C9JCN9 74 aa8.74□□□□□ -1.01
PRKCH-223ENST00000557294 A0A087WSZ3 146 aa8.73□□□□□ -1.01
PRKCH-223ENST00000557294 HIST3H2BBQ8N257 126 aa8.73□□□□□ -1.01
PRKCH-223ENST00000557294 HIST1H2BLQ99880 126 aa8.73□□□□□ -1.01
PRKCH-223ENST00000557294 S100A6P06703 90 aa8.68□□□□□ -1.02
PRKCH-223ENST00000557294 SIGMAR1Q99720 223 aa8.68□□□□□ -1.02
PRKCH-223ENST00000557294 S100A1P23297 94 aa8.65□□□□□ -1.02
PRKCH-223ENST00000557294 IGKV4-1P06312 121 aa8.62□□□□□ -1.03
PRKCH-223ENST00000557294 BVES-AS1Q5T3Y7 98 aa8.62□□□□□ -1.03
PRKCH-223ENST00000557294 HIST1H4GQ99525 98 aa8.62□□□□□ -1.03
PRKCH-223ENST00000557294 NDUFV3P56181 108 aaKnown RBP8.61□□□□□ -1.03
PRKCH-223ENST00000557294 SPINK7P58062 85 aa8.61□□□□□ -1.03
PRKCH-223ENST00000557294 C12orf57Q99622 126 aa8.6□□□□□ -1.03
PRKCH-223ENST00000557294 MDN1Q9NU22 5596 aa8.6□□□□□ -1.03
PRKCH-223ENST00000557294 COX8AP10176 69 aa8.58□□□□□ -1.04
PRKCH-223ENST00000557294 A6NN06 94 aa8.56□□□□□ -1.04
PRKCH-223ENST00000557294 KRTAP5-9P26371 169 aa8.56□□□□□ -1.04
PRKCH-223ENST00000557294 KMT2DO14686 5537 aa8.56□□□□□ -1.04
PRKCH-223ENST00000557294 A0A1W2PNM2 257 aa8.55□□□□□ -1.04
PRKCH-223ENST00000557294 H3BMG7 143 aa8.55□□□□□ -1.04
PRKCH-223ENST00000557294 DLEU1O43261 78 aa8.55□□□□□ -1.04
PRKCH-223ENST00000557294 ZCCHC13Q8WW36 166 aaKnown RBP8.54□□□□□ -1.04
PRKCH-223ENST00000557294 IGHV6-1A0A0B4J1U7 121 aa8.53□□□□□ -1.04
PRKCH-223ENST00000557294 SNCGO76070 127 aa8.53□□□□□ -1.04
PRKCH-223ENST00000557294 RAB37Q96AX2 223 aa8.52□□□□□ -1.05
PRKCH-223ENST00000557294 GHRHP01286 108 aa8.51□□□□□ -1.05
PRKCH-223ENST00000557294 KRTAP2-3P0C7H8 128 aa8.51□□□□□ -1.05
PRKCH-223ENST00000557294 DEFB116Q30KQ4 102 aa8.51□□□□□ -1.05
PRKCH-223ENST00000557294 C14orf144Q96I85 54 aa8.51□□□□□ -1.05
PRKCH-223ENST00000557294 KRTAP2-4Q9BYR9 128 aa8.51□□□□□ -1.05
PRKCH-223ENST00000557294 LINC00472Q9H8W2 130 aa8.5□□□□□ -1.05
PRKCH-223ENST00000557294 H0YGX0 51 aa8.49□□□□□ -1.05
PRKCH-223ENST00000557294 HIGD1BQ9P298 99 aa8.49□□□□□ -1.05
PRKCH-223ENST00000557294 WFDC13Q8IUB5 93 aa8.48□□□□□ -1.05
PRKCH-223ENST00000557294 SPATA45Q537H7 98 aa8.47□□□□□ -1.05
PRKCH-223ENST00000557294 FAM218AQ96MZ4 157 aa8.47□□□□□ -1.05
PRKCH-223ENST00000557294 PAM16Q9Y3D7 125 aa8.47□□□□□ -1.05
PRKCH-223ENST00000557294 A0A0B4J2C4 111 aa8.46□□□□□ -1.06
PRKCH-223ENST00000557294 TRBV7-4A0A0J9YYF1 115 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms