RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 FAM19A1Q7Z5A9 133 aa11.51□□□□□ -0.57
SDR39U1-220ENST00000556548 RTL8CO15255 209 aa11.5□□□□□ -0.57
SDR39U1-220ENST00000556548 LINC01547P58512 204 aaPredicted RBP11.49□□□□□ -0.57
SDR39U1-220ENST00000556548 TRAV7A0A075B6U4 112 aa11.48□□□□□ -0.57
SDR39U1-220ENST00000556548 FP248Q71RG6 208 aaPredicted RBP11.48□□□□□ -0.57
SDR39U1-220ENST00000556548 LINC00474Q9P2X8 69 aa11.48□□□□□ -0.57
SDR39U1-220ENST00000556548 LOC110117498A0A087WWA1 95 aa11.47□□□□□ -0.57
SDR39U1-220ENST00000556548 KLKP1Q107X0 134 aa11.47□□□□□ -0.57
SDR39U1-220ENST00000556548 DNAH17Q9UFH2 4485 aa11.45□□□□□ -0.58
SDR39U1-220ENST00000556548 SRRM2Q9UQ35 2752 aaKnown RBP11.45□□□□□ -0.58
SDR39U1-220ENST00000556548 TNP2Q05952 138 aa11.45□□□□□ -0.58
SDR39U1-220ENST00000556548 SPACA4Q8TDM5 124 aa11.45□□□□□ -0.58
SDR39U1-220ENST00000556548 HIGD2AQ9BW72 106 aa11.45□□□□□ -0.58
SDR39U1-220ENST00000556548 HYDINQ4G0P3 5121 aa11.45□□□□□ -0.58
SDR39U1-220ENST00000556548 UBL5Q9BZL1 73 aa11.44□□□□□ -0.58
SDR39U1-220ENST00000556548 V9GYY9 64 aa11.44□□□□□ -0.58
SDR39U1-220ENST00000556548 TRBV7-4A0A0J9YYF1 115 aa11.44□□□□□ -0.58
SDR39U1-220ENST00000556548 SEC61GP60059 68 aa11.44□□□□□ -0.58
SDR39U1-220ENST00000556548 IGLV5-52A0A0A0MRZ9 124 aa11.43□□□□□ -0.58
SDR39U1-220ENST00000556548 C1orf195Q5TG92 126 aa11.41□□□□□ -0.58
SDR39U1-220ENST00000556548 FRAS1Q86XX4 4008 aa11.4□□□□□ -0.58
SDR39U1-220ENST00000556548 IGLV5-48A0A075B6I7 105 aa11.4□□□□□ -0.59
SDR39U1-220ENST00000556548 PDE6GP18545 87 aa11.39□□□□□ -0.59
SDR39U1-220ENST00000556548 BRK1Q8WUW1 75 aa11.39□□□□□ -0.59
SDR39U1-220ENST00000556548 ALMS1Q8TCU4 4167 aa11.39□□□□□ -0.59
SDR39U1-220ENST00000556548 DNAH6Q9C0G6 4158 aa11.39□□□□□ -0.59
SDR39U1-220ENST00000556548 C3orf84H3BNL1 204 aa11.38□□□□□ -0.59
SDR39U1-220ENST00000556548 F8WEM9 126 aa11.38□□□□□ -0.59
SDR39U1-220ENST00000556548 NDUFC1O43677 76 aa11.37□□□□□ -0.59
SDR39U1-220ENST00000556548 UBE2AP49459 152 aa11.37□□□□□ -0.59
SDR39U1-220ENST00000556548 SNURFQ9Y675 71 aa11.37□□□□□ -0.59
SDR39U1-220ENST00000556548 ATP5EP56381 51 aaPredicted RBP11.36□□□□□ -0.59
SDR39U1-220ENST00000556548 A0A0U1RQV1 116 aa11.34□□□□□ -0.59
SDR39U1-220ENST00000556548 KRTAP10-2P60368 255 aa11.34□□□□□ -0.59
SDR39U1-220ENST00000556548 DNAH8Q96JB1 4490 aa11.33□□□□□ -0.6
SDR39U1-220ENST00000556548 SMIM29Q86T20 159 aa11.33□□□□□ -0.6
SDR39U1-220ENST00000556548 DNAH11Q96DT5 4516 aa11.33□□□□□ -0.6
SDR39U1-220ENST00000556548 DNAH5Q8TE73 4624 aa11.31□□□□□ -0.6
SDR39U1-220ENST00000556548 Q6ZVQ6 151 aa11.31□□□□□ -0.6
SDR39U1-220ENST00000556548 C1orf137Q5JT78 98 aa11.31□□□□□ -0.6
SDR39U1-220ENST00000556548 A0A0G2JQZ4 141 aa11.3□□□□□ -0.6
SDR39U1-220ENST00000556548 HAMPP81172 84 aa11.3□□□□□ -0.6
SDR39U1-220ENST00000556548 H0Y9J4 135 aa11.29□□□□□ -0.6
SDR39U1-220ENST00000556548 PLAC8Q9NZF1 115 aa11.29□□□□□ -0.6
SDR39U1-220ENST00000556548 FAT2Q9NYQ8 4349 aa11.27□□□□□ -0.61
SDR39U1-220ENST00000556548 A0A1W2PNM2 257 aa11.26□□□□□ -0.61
SDR39U1-220ENST00000556548 PSORS1C2Q9UIG4 136 aa11.26□□□□□ -0.61
SDR39U1-220ENST00000556548 KRTAP13-1Q8IUC0 172 aa11.26□□□□□ -0.61
SDR39U1-220ENST00000556548 PKD1P98161 4303 aa11.25□□□□□ -0.61
SDR39U1-220ENST00000556548 FAM30AQ9NZY2 134 aa11.25□□□□□ -0.61
SDR39U1-220ENST00000556548 CXCL6P80162 114 aa11.25□□□□□ -0.61
SDR39U1-220ENST00000556548 SCXQ7RTU7 201 aa11.25□□□□□ -0.61
SDR39U1-220ENST00000556548 SACSQ9NZJ4 4579 aa11.21□□□□□ -0.61
SDR39U1-220ENST00000556548 MPLKIPQ8TAP9 179 aa11.21□□□□□ -0.62
SDR39U1-220ENST00000556548 IGFL1Q6UW32 110 aa11.2□□□□□ -0.62
SDR39U1-220ENST00000556548 NREPQ16612 68 aa11.2□□□□□ -0.62
SDR39U1-220ENST00000556548 Q8NBF4 154 aa11.2□□□□□ -0.62
SDR39U1-220ENST00000556548 FAM229BQ4G0N7 80 aa11.19□□□□□ -0.62
SDR39U1-220ENST00000556548 CIRBP-AS1Q8TBR5 109 aa11.18□□□□□ -0.62
SDR39U1-220ENST00000556548 KRTAP10-1P60331 282 aa11.18□□□□□ -0.62
SDR39U1-220ENST00000556548 TMEM254Q8TBM7 123 aa11.18□□□□□ -0.62
SDR39U1-220ENST00000556548 SPRR1BP22528 89 aa11.16□□□□□ -0.62
SDR39U1-220ENST00000556548 SPRR4Q96PI1 79 aa11.14□□□□□ -0.63
SDR39U1-220ENST00000556548 Q8N9L7 120 aa11.13□□□□□ -0.63
SDR39U1-220ENST00000556548 IGLV8-61A0A075B6I0 122 aa11.13□□□□□ -0.63
SDR39U1-220ENST00000556548 IGLV9-49A0A0B4J1Y8 123 aa11.12□□□□□ -0.63
SDR39U1-220ENST00000556548 ZNF861PO60384 105 aa11.12□□□□□ -0.63
SDR39U1-220ENST00000556548 ANAPC11Q9NYG5 84 aa11.12□□□□□ -0.63
SDR39U1-220ENST00000556548 BPY2O14599 106 aa11.11□□□□□ -0.63
SDR39U1-220ENST00000556548 PMAIP1Q13794 54 aa11.11□□□□□ -0.63
SDR39U1-220ENST00000556548 PRR15Q8IV56 129 aa11.11□□□□□ -0.63
SDR39U1-220ENST00000556548 LRP1BQ9NZR2 4599 aa11.08□□□□□ -0.64
SDR39U1-220ENST00000556548 A0A087WSZ3 146 aa11.08□□□□□ -0.64
SDR39U1-220ENST00000556548 A0A1B0GW54 56 aa11.07□□□□□ -0.64
SDR39U1-220ENST00000556548 IGLV7-43P04211 117 aa11.07□□□□□ -0.64
SDR39U1-220ENST00000556548 PKHD1P08F94 4074 aa11.07□□□□□ -0.64
SDR39U1-220ENST00000556548 LCE6AA0A183 80 aa11.07□□□□□ -0.64
SDR39U1-220ENST00000556548 Q6ZSA8 131 aa11.07□□□□□ -0.64
SDR39U1-220ENST00000556548 DEFB116Q30KQ4 102 aa11.05□□□□□ -0.64
SDR39U1-220ENST00000556548 ZNF706Q9Y5V0 76 aaPredicted RBP11.04□□□□□ -0.64
SDR39U1-220ENST00000556548 LINC00483Q53H64 154 aa11.03□□□□□ -0.64
SDR39U1-220ENST00000556548 IGKV4-1P06312 121 aa11.01□□□□□ -0.65
SDR39U1-220ENST00000556548 OCR1Q9BZK8 76 aa11.01□□□□□ -0.65
SDR39U1-220ENST00000556548 KMT2CQ8NEZ4 4911 aaKnown RBP11□□□□□ -0.65
SDR39U1-220ENST00000556548 MOBPQ13875 183 aa10.99□□□□□ -0.65
SDR39U1-220ENST00000556548 Q1T7F1 81 aa10.98□□□□□ -0.65
SDR39U1-220ENST00000556548 hDV103S1A0JD37 113 aa10.97□□□□□ -0.65
SDR39U1-220ENST00000556548 DSCR10P59022 87 aa10.96□□□□□ -0.65
SDR39U1-220ENST00000556548 RYR2Q92736 4967 aa10.96□□□□□ -0.66
SDR39U1-220ENST00000556548 VPS13BQ7Z7G8 4022 aa10.94□□□□□ -0.66
SDR39U1-220ENST00000556548 K7EQZ3 153 aa10.94□□□□□ -0.66
SDR39U1-220ENST00000556548 RPL37AP61513 92 aaKnown RBP10.92□□□□□ -0.66
SDR39U1-220ENST00000556548 CD164Q04900 197 aa10.92□□□□□ -0.66
SDR39U1-220ENST00000556548 DYNC1H1Q14204 4646 aaKnown RBP10.91□□□□□ -0.66
SDR39U1-220ENST00000556548 C1orf64Q8NEQ6 169 aa10.87□□□□□ -0.67
SDR39U1-220ENST00000556548 A0A1B0GVY2 172 aa10.86□□□□□ -0.67
SDR39U1-220ENST00000556548 LINC00472Q9H8W2 130 aa10.86□□□□□ -0.67
SDR39U1-220ENST00000556548 PSPHP1O15172 72 aa10.84□□□□□ -0.67
SDR39U1-220ENST00000556548 TRAV22A0A0B4J277 110 aa10.83□□□□□ -0.68
SDR39U1-220ENST00000556548 SMR3BP02814 79 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms