RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 SMCR5Q8TEV8 140 aa3.92□□□□□ -1.78
HIF1A-208ENST00000556237 LINC01600Q96MT4 127 aa3.92□□□□□ -1.78
HIF1A-208ENST00000556237 HYDINQ4G0P3 5121 aa3.91□□□□□ -1.78
HIF1A-208ENST00000556237 H3BQ85 93 aa3.91□□□□□ -1.78
HIF1A-208ENST00000556237 TMEM256-PLSCR3K7ERE1 68 aa3.91□□□□□ -1.78
HIF1A-208ENST00000556237 BCE1O60756 84 aa3.91□□□□□ -1.78
HIF1A-208ENST00000556237 HAMPP81172 84 aa3.91□□□□□ -1.78
HIF1A-208ENST00000556237 PRLHP81277 87 aa3.91□□□□□ -1.78
HIF1A-208ENST00000556237 OCIAD2Q56VL3 154 aa3.91□□□□□ -1.78
HIF1A-208ENST00000556237 Q6ZSA8 131 aa3.91□□□□□ -1.78
HIF1A-208ENST00000556237 SCXQ7RTU7 201 aa3.91□□□□□ -1.78
HIF1A-208ENST00000556237 DEFB105AQ8NG35 78 aa3.91□□□□□ -1.78
HIF1A-208ENST00000556237 Q9BRP9 147 aa3.91□□□□□ -1.78
HIF1A-208ENST00000556237 ERC2-IT1O76042 136 aa3.9□□□□□ -1.79
HIF1A-208ENST00000556237 MT3P25713 68 aa3.9□□□□□ -1.79
HIF1A-208ENST00000556237 C1orf137Q5JT78 98 aa3.9□□□□□ -1.79
HIF1A-208ENST00000556237 TEN1Q86WV5 123 aa3.9□□□□□ -1.79
HIF1A-208ENST00000556237 HIGD2AQ9BW72 106 aa3.9□□□□□ -1.79
HIF1A-208ENST00000556237 PSORS1C2Q9UIG4 136 aa3.9□□□□□ -1.79
HIF1A-208ENST00000556237 SACSQ9NZJ4 4579 aa3.89□□□□□ -1.79
HIF1A-208ENST00000556237 H0Y9J4 135 aa3.89□□□□□ -1.79
HIF1A-208ENST00000556237 ST20-AS1Q8NBB2 130 aa3.89□□□□□ -1.79
HIF1A-208ENST00000556237 PPDPFLQ8WWR9 84 aa3.89□□□□□ -1.79
HIF1A-208ENST00000556237 LAMTOR3Q9UHA4 124 aa3.89□□□□□ -1.79
HIF1A-208ENST00000556237 Q8N377 158 aa3.88□□□□□ -1.79
HIF1A-208ENST00000556237 TEX49A0A1B0GTD5 131 aa3.87□□□□□ -1.79
HIF1A-208ENST00000556237 A0A1B0GV72 72 aa3.87□□□□□ -1.79
HIF1A-208ENST00000556237 JMJD7-PLA2G4BH0Y9G9 81 aa3.87□□□□□ -1.79
HIF1A-208ENST00000556237 ZNF861PO60384 105 aa3.87□□□□□ -1.79
HIF1A-208ENST00000556237 IGLV7-43P04211 117 aa3.87□□□□□ -1.79
HIF1A-208ENST00000556237 XGP55808 180 aa3.87□□□□□ -1.79
HIF1A-208ENST00000556237 NDUFV3P56181 108 aaKnown RBP3.87□□□□□ -1.79
HIF1A-208ENST00000556237 KRTAP13-1Q8IUC0 172 aa3.87□□□□□ -1.79
HIF1A-208ENST00000556237 DNAH11Q96DT5 4516 aa3.86□□□□□ -1.79
HIF1A-208ENST00000556237 J3QR89 54 aa3.86□□□□□ -1.79
HIF1A-208ENST00000556237 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
HIF1A-208ENST00000556237 RBM3P98179 157 aaKnown RBP3.86□□□□□ -1.79
HIF1A-208ENST00000556237 GAGE2AQ6NT46 116 aa3.86□□□□□ -1.79
HIF1A-208ENST00000556237 IGLV5-48A0A075B6I7 105 aa3.85□□□□□ -1.79
HIF1A-208ENST00000556237 K7ERU9 68 aa3.85□□□□□ -1.79
HIF1A-208ENST00000556237 SMR3BP02814 79 aaPredicted RBP3.85□□□□□ -1.79
HIF1A-208ENST00000556237 OBSCN-AS1Q96MR7 158 aa3.85□□□□□ -1.79
HIF1A-208ENST00000556237 C14orf132Q9NPU4 83 aa3.85□□□□□ -1.79
HIF1A-208ENST00000556237 DNAH8Q96JB1 4490 aa3.85□□□□□ -1.79
HIF1A-208ENST00000556237 FRAS1Q86XX4 4008 aa3.84□□□□□ -1.79
HIF1A-208ENST00000556237 C3orf22Q8N5N4 141 aa3.84□□□□□ -1.79
HIF1A-208ENST00000556237 DSCR8Q96T75 97 aa3.84□□□□□ -1.79
HIF1A-208ENST00000556237 FAT2Q9NYQ8 4349 aa3.83□□□□□ -1.8
HIF1A-208ENST00000556237 SPRR1BP22528 89 aa3.83□□□□□ -1.8
HIF1A-208ENST00000556237 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
HIF1A-208ENST00000556237 SMIM29Q86T20 159 aa3.83□□□□□ -1.8
HIF1A-208ENST00000556237 SPRR4Q96PI1 79 aa3.83□□□□□ -1.8
HIF1A-208ENST00000556237 ZNF706Q9Y5V0 76 aaPredicted RBP3.83□□□□□ -1.8
HIF1A-208ENST00000556237 DNAH5Q8TE73 4624 aa3.82□□□□□ -1.8
HIF1A-208ENST00000556237 HECTD4Q9Y4D8 3996 aa3.82□□□□□ -1.8
HIF1A-208ENST00000556237 F8WEM9 126 aa3.82□□□□□ -1.8
HIF1A-208ENST00000556237 CCKP06307 115 aa3.82□□□□□ -1.8
HIF1A-208ENST00000556237 RPL37AP61513 92 aaKnown RBP3.82□□□□□ -1.8
HIF1A-208ENST00000556237 RYR2Q92736 4967 aa3.82□□□□□ -1.8
HIF1A-208ENST00000556237 LOC110117498A0A087WWA1 95 aa3.81□□□□□ -1.8
HIF1A-208ENST00000556237 PDE6GP18545 87 aa3.81□□□□□ -1.8
HIF1A-208ENST00000556237 ANAPC11Q9NYG5 84 aa3.81□□□□□ -1.8
HIF1A-208ENST00000556237 PKD1P98161 4303 aa3.81□□□□□ -1.8
HIF1A-208ENST00000556237 TRBV7-4A0A0J9YYF1 115 aa3.8□□□□□ -1.8
HIF1A-208ENST00000556237 Q6ZQT0 140 aa3.8□□□□□ -1.8
HIF1A-208ENST00000556237 VPS25Q9BRG1 176 aa3.8□□□□□ -1.8
HIF1A-208ENST00000556237 IGLV9-49A0A0B4J1Y8 123 aa3.79□□□□□ -1.8
HIF1A-208ENST00000556237 ACYP1P07311 99 aa3.79□□□□□ -1.8
HIF1A-208ENST00000556237 LINC00483Q53H64 154 aa3.79□□□□□ -1.8
HIF1A-208ENST00000556237 IGLV8-61A0A075B6I0 122 aa3.78□□□□□ -1.8
HIF1A-208ENST00000556237 A0A0G2JQZ4 141 aa3.78□□□□□ -1.8
HIF1A-208ENST00000556237 C9orf153Q5TBE3 101 aa3.78□□□□□ -1.8
HIF1A-208ENST00000556237 SPINK6Q6UWN8 80 aa3.78□□□□□ -1.8
HIF1A-208ENST00000556237 FAM240AA0A1B0GVK7 77 aa3.77□□□□□ -1.81
HIF1A-208ENST00000556237 A0A1W2PNM2 257 aa3.77□□□□□ -1.81
HIF1A-208ENST00000556237 CDK2AP2O75956 126 aa3.77□□□□□ -1.81
HIF1A-208ENST00000556237 SEC61BP60468 96 aaKnown RBP3.77□□□□□ -1.81
HIF1A-208ENST00000556237 Q6JHZ5 121 aa3.77□□□□□ -1.81
HIF1A-208ENST00000556237 IGFL1Q6UW32 110 aa3.77□□□□□ -1.81
HIF1A-208ENST00000556237 DYNC1H1Q14204 4646 aaKnown RBP3.77□□□□□ -1.81
HIF1A-208ENST00000556237 MOBPQ13875 183 aa3.76□□□□□ -1.81
HIF1A-208ENST00000556237 SSBP3-AS1Q7Z2R9 100 aa3.76□□□□□ -1.81
HIF1A-208ENST00000556237 LINC00846Q9NV44 126 aa3.76□□□□□ -1.81
HIF1A-208ENST00000556237 LRP1BQ9NZR2 4599 aa3.76□□□□□ -1.81
HIF1A-208ENST00000556237 KMT2CQ8NEZ4 4911 aaKnown RBP3.75□□□□□ -1.81
HIF1A-208ENST00000556237 FAM229BQ4G0N7 80 aa3.75□□□□□ -1.81
HIF1A-208ENST00000556237 Q8NBF4 154 aa3.75□□□□□ -1.81
HIF1A-208ENST00000556237 CRYGAP11844 174 aa3.74□□□□□ -1.81
HIF1A-208ENST00000556237 KRTAP10-5P60370 271 aa3.74□□□□□ -1.81
HIF1A-208ENST00000556237 KRTAP10-4P60372 401 aaPredicted RBP3.74□□□□□ -1.81
HIF1A-208ENST00000556237 NREPQ16612 68 aa3.74□□□□□ -1.81
HIF1A-208ENST00000556237 HRCT1Q6UXD1 115 aa3.74□□□□□ -1.81
HIF1A-208ENST00000556237 UBL5Q9BZL1 73 aa3.74□□□□□ -1.81
HIF1A-208ENST00000556237 A0A087X002 238 aa3.73□□□□□ -1.81
HIF1A-208ENST00000556237 A0A1B0GW54 56 aa3.73□□□□□ -1.81
HIF1A-208ENST00000556237 KRTAP1-4P0C5Y4 121 aa3.73□□□□□ -1.81
HIF1A-208ENST00000556237 LINC00643Q86TS7 51 aa3.73□□□□□ -1.81
HIF1A-208ENST00000556237 SIGMAR1Q99720 223 aa3.73□□□□□ -1.81
HIF1A-208ENST00000556237 A0A087WSZ3 146 aa3.72□□□□□ -1.81
HIF1A-208ENST00000556237 SCGB1A1P11684 91 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms