RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 LOC101927531A0A1B0GV80 90 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 RBAKDNA6NC62 111 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 NCR2O95944 276 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 SPINK1P00995 79 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 LINC00694P0DN24 101 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 PYYP10082 97 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 RBP2P50120 134 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 KRTAP19-7Q3SYF9 63 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 CTAGE3PQ8IX95 158 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 LZICQ8WZA0 190 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 SPRR2GQ9BYE4 73 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 NPVFQ9HCQ7 196 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 COMMD3Q9UBI1 195 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 V9GYS6 101 aa0.2□□□□□ -2.38
NEK9-208ENST00000555961 GVQW2A0A096LPI5 108 aaPredicted RBP0.19□□□□□ -2.38
NEK9-208ENST00000555961 C9JAW5 83 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 M0R2P5 195 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 FXYD1O00168 92 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 BCE1O60756 84 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 CD3DP04234 171 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 MT1GP13640 62 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 S100A3P33764 101 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 RPS29P62273 56 aaKnown RBP0.19□□□□□ -2.38
NEK9-208ENST00000555961 HMGN3Q15651 99 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 KRTAP6-2Q3LI66 62 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 TMEM141Q96I45 108 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 PPP3R2Q96LZ3 170 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 TPT1P8Q9HAU6 139 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 GSKIPQ9P0R6 139 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 HIGD1AQ9Y241 93 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 DNAJC15Q9Y5T4 150 aa0.19□□□□□ -2.38
NEK9-208ENST00000555961 A0A087WWC5 75 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 F2Z2F3 143 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 J3QLW9 94 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 IGKCP01834 107 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 TRAPPC2P0DI81 140 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 TRAPPC2BP0DI82 140 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 IL7P13232 177 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 NCS1P62166 190 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 SNRPGP62308 76 aaKnown RBP0.18□□□□□ -2.38
NEK9-208ENST00000555961 PRLHP81277 87 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 SSBP1Q04837 148 aaKnown RBP0.18□□□□□ -2.38
NEK9-208ENST00000555961 LINC01590Q5TEZ4 76 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 TMEM244Q5VVB8 128 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 AKAP14Q86UN6 197 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 LSM10Q969L4 123 aaKnown RBP0.18□□□□□ -2.38
NEK9-208ENST00000555961 CGREF1Q99674 301 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 PRR15LQ9BU68 103 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 BANF2Q9H503 90 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 NDUFA4L2Q9NRX3 87 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 ABRACLQ9P1F3 81 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 SCP2D1Q9UJQ7 156 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 R4GMQ9 66 aa0.18□□□□□ -2.38
NEK9-208ENST00000555961 CRYM-AS1A6NIL9 109 aa0.17□□□□□ -2.38
NEK9-208ENST00000555961 ZNF670-ZNF695F2Z2N8 137 aa0.17□□□□□ -2.38
NEK9-208ENST00000555961 J3QR89 54 aa0.17□□□□□ -2.38
NEK9-208ENST00000555961 IGLC1P0CG04 106 aa0.17□□□□□ -2.38
NEK9-208ENST00000555961 EMX2Q04743 252 aa0.17□□□□□ -2.38
NEK9-208ENST00000555961 FAM74A4Q5TZK3 123 aa0.17□□□□□ -2.38
NEK9-208ENST00000555961 CFAP126Q5VTH2 177 aa0.17□□□□□ -2.38
NEK9-208ENST00000555961 SNX29P2Q8IUI4 249 aa0.17□□□□□ -2.38
NEK9-208ENST00000555961 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.17□□□□□ -2.38
NEK9-208ENST00000555961 PP6455Q8WZ26 134 aa0.17□□□□□ -2.38
NEK9-208ENST00000555961 ARHGAP5-AS1Q96IT6 56 aa0.17□□□□□ -2.38
NEK9-208ENST00000555961 SPRR4Q96PI1 79 aa0.17□□□□□ -2.38
NEK9-208ENST00000555961 TCRBV3S1A0A5B6 114 aa0.16□□□□□ -2.38
NEK9-208ENST00000555961 H3BQF6 201 aa0.16□□□□□ -2.38
NEK9-208ENST00000555961 KRTAP6-1Q3LI64 71 aa0.16□□□□□ -2.38
NEK9-208ENST00000555961 C9orf153Q5TBE3 101 aa0.16□□□□□ -2.38
NEK9-208ENST00000555961 CYP2G1PQ6ZSU1 146 aa0.16□□□□□ -2.38
NEK9-208ENST00000555961 C6orf201Q7Z4U5 140 aa0.16□□□□□ -2.38
NEK9-208ENST00000555961 MAFIPQ8WZ33 124 aa0.16□□□□□ -2.38
NEK9-208ENST00000555961 MT1LQ93083 61 aa0.16□□□□□ -2.38
NEK9-208ENST00000555961 PAIP2BQ9ULR5 123 aaKnown RBP0.16□□□□□ -2.38
NEK9-208ENST00000555961 TRAV30A0A087WSZ9 112 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 IFNGP01579 166 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 MT-ND4LP03901 98 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 COX4I1P13073 169 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 SNCAP37840 140 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 PKIAP61925 76 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 SPAG11BQ08648 103 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 IQCJQ1A5X6 159 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 KRTAP19-5Q3LI72 72 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 SPANXN1Q5VSR9 72 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 SMIM11BQ8TCY0 68 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 AQP10Q96PS8 301 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 S100A13Q99584 98 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 BATF3Q9NR55 127 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 TMEM242Q9NWH2 141 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 C6orf48Q9UBA6 75 aa0.15□□□□□ -2.39
NEK9-208ENST00000555961 TRBV7-3A0A075B6L6 115 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 TRBV25-1A0A075B6N4 114 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 M0R129 80 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 M0R3E3 92 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 CORTO00230 105 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 SNAPC5O75971 98 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 SLC25A6P12236 298 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 ELOF1P60002 83 aaKnown RBP0.14□□□□□ -2.39
NEK9-208ENST00000555961 S100A10P60903 97 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms