RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 C1orf137Q5JT78 98 aa6.29□□□□□ -1.4
SRP54-208ENST00000555557 hADV29S1A0JD25 119 aa6.28□□□□□ -1.4
SRP54-208ENST00000555557 RYR1P21817 5038 aa6.28□□□□□ -1.4
SRP54-208ENST00000555557 FAT1Q14517 4588 aa6.28□□□□□ -1.4
SRP54-208ENST00000555557 UBE2AP49459 152 aa6.27□□□□□ -1.41
SRP54-208ENST00000555557 SMCR5Q8TEV8 140 aa6.27□□□□□ -1.41
SRP54-208ENST00000555557 VPS13BQ7Z7G8 4022 aa6.27□□□□□ -1.41
SRP54-208ENST00000555557 ERC2-IT1O76042 136 aa6.27□□□□□ -1.41
SRP54-208ENST00000555557 INAFM2P0DMQ5 153 aa6.27□□□□□ -1.41
SRP54-208ENST00000555557 TMEM258P61165 79 aa6.27□□□□□ -1.41
SRP54-208ENST00000555557 HIST1H4AP62805 103 aaKnown RBP6.27□□□□□ -1.41
SRP54-208ENST00000555557 HIGD2AQ9BW72 106 aa6.27□□□□□ -1.41
SRP54-208ENST00000555557 DNAL4O96015 105 aa6.25□□□□□ -1.41
SRP54-208ENST00000555557 KRTAP17-1Q9BYP8 105 aa6.25□□□□□ -1.41
SRP54-208ENST00000555557 BAALC-AS2P0C853 105 aa6.25□□□□□ -1.41
SRP54-208ENST00000555557 Q6ZQY7 126 aa6.25□□□□□ -1.41
SRP54-208ENST00000555557 KRTAP13-1Q8IUC0 172 aa6.25□□□□□ -1.41
SRP54-208ENST00000555557 DHRS4-AS1Q9P1J3 65 aa6.25□□□□□ -1.41
SRP54-208ENST00000555557 ST20-AS1Q8NBB2 130 aa6.24□□□□□ -1.41
SRP54-208ENST00000555557 HSPG2P98160 4391 aa6.24□□□□□ -1.41
SRP54-208ENST00000555557 H0Y9J4 135 aa6.23□□□□□ -1.41
SRP54-208ENST00000555557 IGLV7-43P04211 117 aa6.23□□□□□ -1.41
SRP54-208ENST00000555557 ABCA13Q86UQ4 5058 aa6.23□□□□□ -1.41
SRP54-208ENST00000555557 DEFB105AQ8NG35 78 aa6.23□□□□□ -1.41
SRP54-208ENST00000555557 SRRM2Q9UQ35 2752 aaKnown RBP6.22□□□□□ -1.41
SRP54-208ENST00000555557 ZNF861PO60384 105 aa6.22□□□□□ -1.41
SRP54-208ENST00000555557 SERP2Q8N6R1 65 aa6.22□□□□□ -1.41
SRP54-208ENST00000555557 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.21□□□□□ -1.41
SRP54-208ENST00000555557 ORMDL1Q9P0S3 153 aa6.21□□□□□ -1.41
SRP54-208ENST00000555557 RPL37AP61513 92 aaKnown RBP6.21□□□□□ -1.42
SRP54-208ENST00000555557 Q6JHZ5 121 aa6.21□□□□□ -1.42
SRP54-208ENST00000555557 CDK2AP2O75956 126 aa6.19□□□□□ -1.42
SRP54-208ENST00000555557 LINC01547P58512 204 aaPredicted RBP6.19□□□□□ -1.42
SRP54-208ENST00000555557 Q8N377 158 aa6.19□□□□□ -1.42
SRP54-208ENST00000555557 TMEM256-PLSCR3K7ERE1 68 aa6.17□□□□□ -1.42
SRP54-208ENST00000555557 IGLV5-48A0A075B6I7 105 aa6.16□□□□□ -1.42
SRP54-208ENST00000555557 KRTAP10-4P60372 401 aaPredicted RBP6.16□□□□□ -1.42
SRP54-208ENST00000555557 ANAPC11Q9NYG5 84 aa6.16□□□□□ -1.42
SRP54-208ENST00000555557 IGKV3D-7A0A0C4DH55 119 aa6.15□□□□□ -1.43
SRP54-208ENST00000555557 C4orf26Q17RF5 130 aa6.15□□□□□ -1.43
SRP54-208ENST00000555557 Q5XG85 94 aa6.15□□□□□ -1.43
SRP54-208ENST00000555557 SPRR4Q96PI1 79 aa6.15□□□□□ -1.43
SRP54-208ENST00000555557 OBSCN-AS1Q96MR7 158 aa6.14□□□□□ -1.43
SRP54-208ENST00000555557 DSCR8Q96T75 97 aa6.14□□□□□ -1.43
SRP54-208ENST00000555557 CYSTM1Q9H1C7 97 aa6.14□□□□□ -1.43
SRP54-208ENST00000555557 LAMTOR3Q9UHA4 124 aa6.14□□□□□ -1.43
SRP54-208ENST00000555557 FAM229AH3BQW9 127 aa6.13□□□□□ -1.43
SRP54-208ENST00000555557 HRCT1Q6UXD1 115 aa6.13□□□□□ -1.43
SRP54-208ENST00000555557 SMIM29Q86T20 159 aa6.13□□□□□ -1.43
SRP54-208ENST00000555557 OXTP01178 125 aa6.13□□□□□ -1.43
SRP54-208ENST00000555557 GHRHP01286 108 aa6.13□□□□□ -1.43
SRP54-208ENST00000555557 Q5VSD8 79 aa6.13□□□□□ -1.43
SRP54-208ENST00000555557 KRTAP4-5Q9BYR2 181 aa6.13□□□□□ -1.43
SRP54-208ENST00000555557 H3BQ85 93 aa6.11□□□□□ -1.43
SRP54-208ENST00000555557 SPRR1BP22528 89 aa6.11□□□□□ -1.43
SRP54-208ENST00000555557 ATP5EP2Q5VTU8 51 aa6.11□□□□□ -1.43
SRP54-208ENST00000555557 LINC00846Q9NV44 126 aa6.11□□□□□ -1.43
SRP54-208ENST00000555557 ZNF706Q9Y5V0 76 aaPredicted RBP6.11□□□□□ -1.43
SRP54-208ENST00000555557 PLA2G1BP04054 148 aaKnown RBP6.11□□□□□ -1.43
SRP54-208ENST00000555557 SPINK6Q6UWN8 80 aa6.11□□□□□ -1.43
SRP54-208ENST00000555557 C14orf132Q9NPU4 83 aa6.11□□□□□ -1.43
SRP54-208ENST00000555557 LINC00483Q53H64 154 aa6.1□□□□□ -1.43
SRP54-208ENST00000555557 A0A087WVE0 104 aa6.09□□□□□ -1.44
SRP54-208ENST00000555557 IGLV9-49A0A0B4J1Y8 123 aa6.09□□□□□ -1.44
SRP54-208ENST00000555557 CCKP06307 115 aa6.09□□□□□ -1.44
SRP54-208ENST00000555557 PRO0628Q9UI54 55 aa6.09□□□□□ -1.44
SRP54-208ENST00000555557 SERP1Q9Y6X1 66 aa6.09□□□□□ -1.44
SRP54-208ENST00000555557 A0A0G2JQZ4 141 aa6.08□□□□□ -1.44
SRP54-208ENST00000555557 FAM236DA0A1B0GTK5 79 aa6.08□□□□□ -1.44
SRP54-208ENST00000555557 KRTAP1-4P0C5Y4 121 aa6.08□□□□□ -1.44
SRP54-208ENST00000555557 FAM236CP0DP71 79 aa6.08□□□□□ -1.44
SRP54-208ENST00000555557 RBM3P98179 157 aaKnown RBP6.08□□□□□ -1.44
SRP54-208ENST00000555557 Q8N1X5 172 aa6.08□□□□□ -1.44
SRP54-208ENST00000555557 JMJD7-PLA2G4BH0Y9G9 81 aa6.07□□□□□ -1.44
SRP54-208ENST00000555557 A0A087X002 238 aa6.07□□□□□ -1.44
SRP54-208ENST00000555557 F8WEM9 126 aa6.06□□□□□ -1.44
SRP54-208ENST00000555557 MOBPQ13875 183 aa6.05□□□□□ -1.44
SRP54-208ENST00000555557 TRBV7-4A0A0J9YYF1 115 aa6.04□□□□□ -1.44
SRP54-208ENST00000555557 KRTAP13-2Q52LG2 175 aa6.03□□□□□ -1.44
SRP54-208ENST00000555557 IGFL1Q6UW32 110 aa6.03□□□□□ -1.44
SRP54-208ENST00000555557 C20orf197Q8N268 126 aa6.03□□□□□ -1.44
SRP54-208ENST00000555557 PKHD1L1Q86WI1 4243 aa6.03□□□□□ -1.44
SRP54-208ENST00000555557 TRAV7A0A075B6U4 112 aa6.03□□□□□ -1.44
SRP54-208ENST00000555557 SMIM26A0A096LP01 95 aa6.03□□□□□ -1.44
SRP54-208ENST00000555557 Q6ZQT0 140 aa6.03□□□□□ -1.44
SRP54-208ENST00000555557 IGLV8-61A0A075B6I0 122 aa6.02□□□□□ -1.45
SRP54-208ENST00000555557 PRR26Q8N8Z3 221 aa6.02□□□□□ -1.45
SRP54-208ENST00000555557 UBL5Q9BZL1 73 aa6.02□□□□□ -1.45
SRP54-208ENST00000555557 LOC110117498A0A087WWA1 95 aa6.01□□□□□ -1.45
SRP54-208ENST00000555557 FAM229BQ4G0N7 80 aa6.01□□□□□ -1.45
SRP54-208ENST00000555557 LRP1Q07954 4544 aaKnown RBP6.01□□□□□ -1.45
SRP54-208ENST00000555557 A0A1W2PNM2 257 aa6□□□□□ -1.45
SRP54-208ENST00000555557 Q8NBF4 154 aa6□□□□□ -1.45
SRP54-208ENST00000555557 H7BZZ5 65 aa5.99□□□□□ -1.45
SRP54-208ENST00000555557 NDUFC1O43677 76 aa5.99□□□□□ -1.45
SRP54-208ENST00000555557 ATP5EP56381 51 aaPredicted RBP5.99□□□□□ -1.45
SRP54-208ENST00000555557 KLKP1Q107X0 134 aa5.99□□□□□ -1.45
SRP54-208ENST00000555557 FLG2Q5D862 2391 aaPredicted RBP5.98□□□□□ -1.45
SRP54-208ENST00000555557 PDE6GP18545 87 aa5.98□□□□□ -1.45
SRP54-208ENST00000555557 TYMSOSQ8TAI1 123 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms