RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 Q8N377 158 aa9.42□□□□□ -0.9
XRCC3-211ENST00000555055 ETDCA0A1B0GVM5 59 aa9.41□□□□□ -0.9
XRCC3-211ENST00000555055 DHRS4-AS1Q9P1J3 65 aa9.41□□□□□ -0.9
XRCC3-211ENST00000555055 Q6ZRX8 168 aa9.4□□□□□ -0.9
XRCC3-211ENST00000555055 HIGD2AQ9BW72 106 aa9.4□□□□□ -0.9
XRCC3-211ENST00000555055 KRTAP4-16G5E9R7 235 aaPredicted RBP9.4□□□□□ -0.9
XRCC3-211ENST00000555055 C3orf84H3BNL1 204 aa9.4□□□□□ -0.9
XRCC3-211ENST00000555055 TNP2Q05952 138 aa9.39□□□□□ -0.91
XRCC3-211ENST00000555055 PLA2G2DQ9UNK4 145 aa9.39□□□□□ -0.91
XRCC3-211ENST00000555055 DNAH2Q9P225 4427 aa9.39□□□□□ -0.91
XRCC3-211ENST00000555055 FBN3Q75N90 2809 aa9.39□□□□□ -0.91
XRCC3-211ENST00000555055 UBE2BP63146 152 aa9.39□□□□□ -0.91
XRCC3-211ENST00000555055 PRLHP81277 87 aa9.39□□□□□ -0.91
XRCC3-211ENST00000555055 A0A0G2JQZ4 141 aa9.38□□□□□ -0.91
XRCC3-211ENST00000555055 KRTAP11-1Q8IUC1 163 aa9.38□□□□□ -0.91
XRCC3-211ENST00000555055 hDV103S1A0JD37 113 aa9.38□□□□□ -0.91
XRCC3-211ENST00000555055 ZCCHC13Q8WW36 166 aaKnown RBP9.38□□□□□ -0.91
XRCC3-211ENST00000555055 VPS13DQ5THJ4 4388 aa9.38□□□□□ -0.91
XRCC3-211ENST00000555055 SMIM29Q86T20 159 aa9.37□□□□□ -0.91
XRCC3-211ENST00000555055 SPRR4Q96PI1 79 aa9.37□□□□□ -0.91
XRCC3-211ENST00000555055 Q8NBF4 154 aa9.37□□□□□ -0.91
XRCC3-211ENST00000555055 NBDYA0A0U1RRE5 68 aa9.36□□□□□ -0.91
XRCC3-211ENST00000555055 A0A1W2PNM2 257 aa9.36□□□□□ -0.91
XRCC3-211ENST00000555055 PANO1I0J062 215 aa9.36□□□□□ -0.91
XRCC3-211ENST00000555055 PHF5AQ7RTV0 110 aaKnown RBP9.36□□□□□ -0.91
XRCC3-211ENST00000555055 IGLV5-37A0A075B6J1 123 aa9.35□□□□□ -0.91
XRCC3-211ENST00000555055 SPRR1AP35321 89 aa9.35□□□□□ -0.91
XRCC3-211ENST00000555055 C16orf90A8MZG2 172 aa9.34□□□□□ -0.91
XRCC3-211ENST00000555055 Q1T7F1 81 aa9.34□□□□□ -0.91
XRCC3-211ENST00000555055 REG3GQ6UW15 175 aa9.34□□□□□ -0.91
XRCC3-211ENST00000555055 HECTD4Q9Y4D8 3996 aa9.34□□□□□ -0.91
XRCC3-211ENST00000555055 LRCOL1A6NCL2 159 aa9.33□□□□□ -0.92
XRCC3-211ENST00000555055 NUPR2A6NF83 97 aa9.33□□□□□ -0.92
XRCC3-211ENST00000555055 CNBPP62633 177 aaKnown RBP9.33□□□□□ -0.92
XRCC3-211ENST00000555055 C1orf137Q5JT78 98 aa9.33□□□□□ -0.92
XRCC3-211ENST00000555055 CYP4F30PQ9H0H9 118 aa9.32□□□□□ -0.92
XRCC3-211ENST00000555055 FAM30AQ9NZY2 134 aa9.32□□□□□ -0.92
XRCC3-211ENST00000555055 FRAS1Q86XX4 4008 aa9.32□□□□□ -0.92
XRCC3-211ENST00000555055 DSCR10P59022 87 aa9.3□□□□□ -0.92
XRCC3-211ENST00000555055 Q6ZRN7 208 aaPredicted RBP9.3□□□□□ -0.92
XRCC3-211ENST00000555055 PRR15Q8IV56 129 aa9.28□□□□□ -0.92
XRCC3-211ENST00000555055 C1orf64Q8NEQ6 169 aa9.27□□□□□ -0.92
XRCC3-211ENST00000555055 NDUFB1O75438 58 aa9.27□□□□□ -0.93
XRCC3-211ENST00000555055 PMAIP1Q13794 54 aa9.27□□□□□ -0.93
XRCC3-211ENST00000555055 C9orf163Q8N9P6 203 aa9.25□□□□□ -0.93
XRCC3-211ENST00000555055 HCG22E2RYF7 251 aa9.25□□□□□ -0.93
XRCC3-211ENST00000555055 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.25□□□□□ -0.93
XRCC3-211ENST00000555055 K7EQZ3 153 aa9.24□□□□□ -0.93
XRCC3-211ENST00000555055 C14orf177Q52M58 125 aa9.23□□□□□ -0.93
XRCC3-211ENST00000555055 DNAH6Q9C0G6 4158 aa9.23□□□□□ -0.93
XRCC3-211ENST00000555055 HYDINQ4G0P3 5121 aa9.22□□□□□ -0.93
XRCC3-211ENST00000555055 LINC00476Q8WZB0 136 aa9.19□□□□□ -0.94
XRCC3-211ENST00000555055 DNAH8Q96JB1 4490 aa9.19□□□□□ -0.94
XRCC3-211ENST00000555055 A0A087WTM6 91 aa9.18□□□□□ -0.94
XRCC3-211ENST00000555055 DNAH17Q9UFH2 4485 aa9.18□□□□□ -0.94
XRCC3-211ENST00000555055 IGLV8-61A0A075B6I0 122 aa9.18□□□□□ -0.94
XRCC3-211ENST00000555055 DEFB116Q30KQ4 102 aa9.18□□□□□ -0.94
XRCC3-211ENST00000555055 H3BPC8 53 aa9.18□□□□□ -0.94
XRCC3-211ENST00000555055 LY6G6CO95867 125 aa9.18□□□□□ -0.94
XRCC3-211ENST00000555055 MP68P56378 58 aa9.17□□□□□ -0.94
XRCC3-211ENST00000555055 TRAV22A0A0B4J277 110 aa9.16□□□□□ -0.94
XRCC3-211ENST00000555055 UBE2AP49459 152 aa9.16□□□□□ -0.94
XRCC3-211ENST00000555055 SPANXA2-OT1Q8N9U9 137 aa9.16□□□□□ -0.94
XRCC3-211ENST00000555055 IGFL1Q6UW32 110 aa9.15□□□□□ -0.94
XRCC3-211ENST00000555055 RTL8CO15255 209 aa9.14□□□□□ -0.95
XRCC3-211ENST00000555055 DNAH11Q96DT5 4516 aa9.12□□□□□ -0.95
XRCC3-211ENST00000555055 KRTAP29-1A8MX34 341 aaPredicted RBP9.12□□□□□ -0.95
XRCC3-211ENST00000555055 PSPHP1O15172 72 aa9.12□□□□□ -0.95
XRCC3-211ENST00000555055 SPACA4Q8TDM5 124 aa9.12□□□□□ -0.95
XRCC3-211ENST00000555055 Q6ZR54 194 aa9.12□□□□□ -0.95
XRCC3-211ENST00000555055 DNAH5Q8TE73 4624 aa9.1□□□□□ -0.95
XRCC3-211ENST00000555055 A0A087WSZ3 146 aa9.09□□□□□ -0.95
XRCC3-211ENST00000555055 CD164Q04900 197 aa9.08□□□□□ -0.96
XRCC3-211ENST00000555055 ANAPC11Q9NYG5 84 aa9.08□□□□□ -0.96
XRCC3-211ENST00000555055 C1orf134Q5TEV5 83 aa9.06□□□□□ -0.96
XRCC3-211ENST00000555055 IGLV5-52A0A0A0MRZ9 124 aa9.06□□□□□ -0.96
XRCC3-211ENST00000555055 WFDC13Q8IUB5 93 aa9.06□□□□□ -0.96
XRCC3-211ENST00000555055 LIMD2Q9BT23 127 aa9.06□□□□□ -0.96
XRCC3-211ENST00000555055 IGLV9-49A0A0B4J1Y8 123 aa9.05□□□□□ -0.96
XRCC3-211ENST00000555055 LINC00208Q96KT6 92 aa9.05□□□□□ -0.96
XRCC3-211ENST00000555055 RPL37AP61513 92 aaKnown RBP9.05□□□□□ -0.96
XRCC3-211ENST00000555055 Q5VV11 94 aa9.04□□□□□ -0.96
XRCC3-211ENST00000555055 A8MUN3 132 aa9.03□□□□□ -0.96
XRCC3-211ENST00000555055 H0Y9P7 68 aa9.03□□□□□ -0.96
XRCC3-211ENST00000555055 PRR4Q16378 134 aa9.03□□□□□ -0.96
XRCC3-211ENST00000555055 PSORS1C2Q9UIG4 136 aa9.03□□□□□ -0.96
XRCC3-211ENST00000555055 KRTAP13-1Q8IUC0 172 aa9.03□□□□□ -0.96
XRCC3-211ENST00000555055 SPRR1BP22528 89 aa9.02□□□□□ -0.97
XRCC3-211ENST00000555055 CASC2Q6XLA1 102 aa9.02□□□□□ -0.97
XRCC3-211ENST00000555055 KRTAP10-2P60368 255 aa9.02□□□□□ -0.97
XRCC3-211ENST00000555055 A8MWP4 228 aa9.01□□□□□ -0.97
XRCC3-211ENST00000555055 Q8N9P0 234 aaPredicted RBP9.01□□□□□ -0.97
XRCC3-211ENST00000555055 H0Y9J4 135 aa9□□□□□ -0.97
XRCC3-211ENST00000555055 ALMS1Q8TCU4 4167 aa8.99□□□□□ -0.97
XRCC3-211ENST00000555055 LINC00472Q9H8W2 130 aa8.99□□□□□ -0.97
XRCC3-211ENST00000555055 FAT2Q9NYQ8 4349 aa8.98□□□□□ -0.97
XRCC3-211ENST00000555055 A8MU10 97 aa8.98□□□□□ -0.97
XRCC3-211ENST00000555055 LRP1BQ9NZR2 4599 aa8.97□□□□□ -0.97
XRCC3-211ENST00000555055 PKD1P98161 4303 aa8.96□□□□□ -0.97
XRCC3-211ENST00000555055 LOC101927531A0A1B0GV80 90 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms