RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 C1orf134Q5TEV5 83 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 FAM104AQ969W3 186 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 HIGD2AQ9BW72 106 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 ZNRD1Q9P1U0 126 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 LINC01558Q9Y6Z2 57 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 IGLV9-49A0A0B4J1Y8 123 aa2.88□□□□□ -1.95
ATXN3-227ENST00000554491 SMIM1B2RUZ4 78 aa2.88□□□□□ -1.95
ATXN3-227ENST00000554491 DEFB112Q30KQ8 113 aa2.88□□□□□ -1.95
ATXN3-227ENST00000554491 C9orf129Q5T035 196 aaKnown RBP2.88□□□□□ -1.95
ATXN3-227ENST00000554491 C9orf66Q5T8R8 295 aa2.88□□□□□ -1.95
ATXN3-227ENST00000554491 LINC00208Q96KT6 92 aa2.88□□□□□ -1.95
ATXN3-227ENST00000554491 HERC1Q15751 4861 aa2.87□□□□□ -1.95
ATXN3-227ENST00000554491 IGHV3-73A0A0B4J1V6 119 aa2.87□□□□□ -1.95
ATXN3-227ENST00000554491 RTL8CO15255 209 aa2.87□□□□□ -1.95
ATXN3-227ENST00000554491 CRPP02741 224 aa2.87□□□□□ -1.95
ATXN3-227ENST00000554491 CNBPP62633 177 aaKnown RBP2.87□□□□□ -1.95
ATXN3-227ENST00000554491 RNASE13Q5GAN3 156 aaKnown RBP2.87□□□□□ -1.95
ATXN3-227ENST00000554491 Q6ZQT0 140 aa2.87□□□□□ -1.95
ATXN3-227ENST00000554491 ZFAND2AQ8N6M9 145 aa2.87□□□□□ -1.95
ATXN3-227ENST00000554491 PLAC8Q9NZF1 115 aa2.87□□□□□ -1.95
ATXN3-227ENST00000554491 DSCAML1Q8TD84 2053 aa2.87□□□□□ -1.95
ATXN3-227ENST00000554491 IGHV3OR16-8A0A075B7F1 116 aa2.86□□□□□ -1.95
ATXN3-227ENST00000554491 IGKV2-29A2NJV5 120 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-227ENST00000554491 H3BUA1 57 aa2.86□□□□□ -1.95
ATXN3-227ENST00000554491 COX7A1P24310 79 aa2.86□□□□□ -1.95
ATXN3-227ENST00000554491 POLR2KP53803 58 aaKnown RBP2.86□□□□□ -1.95
ATXN3-227ENST00000554491 EGFEM1PQ0D2K5 195 aa2.86□□□□□ -1.95
ATXN3-227ENST00000554491 BRD3OSQ6XYD6 125 aa2.86□□□□□ -1.95
ATXN3-227ENST00000554491 NACAE9PAV3 2078 aa2.86□□□□□ -1.95
ATXN3-227ENST00000554491 IGHV3-21A0A0B4J1V1 117 aa2.85□□□□□ -1.95
ATXN3-227ENST00000554491 IGHV7-81A0A0B4J1V7 117 aa2.85□□□□□ -1.95
ATXN3-227ENST00000554491 LECT2O14960 151 aa2.85□□□□□ -1.95
ATXN3-227ENST00000554491 IGHV4-59P01825 116 aa2.85□□□□□ -1.95
ATXN3-227ENST00000554491 Q8N9W7 124 aa2.85□□□□□ -1.95
ATXN3-227ENST00000554491 USMG5Q96IX5 58 aa2.85□□□□□ -1.95
ATXN3-227ENST00000554491 DNAH10Q8IVF4 4471 aa2.85□□□□□ -1.95
ATXN3-227ENST00000554491 TNCP24821 2201 aa2.84□□□□□ -1.95
ATXN3-227ENST00000554491 IGHV3-49A0A0A0MS15 119 aa2.84□□□□□ -1.95
ATXN3-227ENST00000554491 IGHV7-4-1A0A0J9YVY3 117 aa2.84□□□□□ -1.95
ATXN3-227ENST00000554491 H3BPC8 53 aa2.84□□□□□ -1.95
ATXN3-227ENST00000554491 CHTF8P0CG12 524 aa2.84□□□□□ -1.95
ATXN3-227ENST00000554491 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.84□□□□□ -1.95
ATXN3-227ENST00000554491 Q8NAQ8 132 aa2.84□□□□□ -1.95
ATXN3-227ENST00000554491 Q8NDZ9 215 aa2.84□□□□□ -1.95
ATXN3-227ENST00000554491 COX7B2Q8TF08 81 aa2.84□□□□□ -1.95
ATXN3-227ENST00000554491 IGKV2-40A0A087WW87 121 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-227ENST00000554491 IGHV3-74A0A0B4J1X5 117 aa2.83□□□□□ -1.96
ATXN3-227ENST00000554491 A0A1W2PNM2 257 aa2.83□□□□□ -1.96
ATXN3-227ENST00000554491 NDUFA4O00483 81 aa2.83□□□□□ -1.96
ATXN3-227ENST00000554491 IGKV2D-40P01614 121 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-227ENST00000554491 APELAP0DMC3 54 aa2.83□□□□□ -1.96
ATXN3-227ENST00000554491 SPAG11BQ08648 103 aa2.83□□□□□ -1.96
ATXN3-227ENST00000554491 SPAG11AQ6PDA7 123 aa2.83□□□□□ -1.96
ATXN3-227ENST00000554491 SMIM11BQ8TCY0 68 aa2.83□□□□□ -1.96
ATXN3-227ENST00000554491 WFDC10AQ9H1F0 79 aa2.83□□□□□ -1.96
ATXN3-227ENST00000554491 IGLV4-3A0A075B6K6 122 aa2.82□□□□□ -1.96
ATXN3-227ENST00000554491 IGHV3-64A0A075B6Q5 118 aa2.82□□□□□ -1.96
ATXN3-227ENST00000554491 A0A087WSZ3 146 aa2.82□□□□□ -1.96
ATXN3-227ENST00000554491 IGHV3-38A0A0C4DH36 116 aa2.82□□□□□ -1.96
ATXN3-227ENST00000554491 ETDCA0A1B0GVM5 59 aa2.82□□□□□ -1.96
ATXN3-227ENST00000554491 IGHV3-11P01762 117 aa2.82□□□□□ -1.96
ATXN3-227ENST00000554491 IGHV3-53P01767 116 aa2.82□□□□□ -1.96
ATXN3-227ENST00000554491 MIR22HGQ0VDD5 57 aa2.82□□□□□ -1.96
ATXN3-227ENST00000554491 NTM-AS1Q6ZSK4 140 aa2.82□□□□□ -1.96
ATXN3-227ENST00000554491 Q6ZTI0 123 aa2.82□□□□□ -1.96
ATXN3-227ENST00000554491 ADM2Q7Z4H4 148 aa2.82□□□□□ -1.96
ATXN3-227ENST00000554491 RPL39LQ96EH5 51 aaKnown RBP2.82□□□□□ -1.96
ATXN3-227ENST00000554491 KMT2AQ03164 3969 aa2.81□□□□□ -1.96
ATXN3-227ENST00000554491 DMBT1Q9UGM3 2413 aaPredicted RBP2.81□□□□□ -1.96
ATXN3-227ENST00000554491 K7ERS5 55 aa2.81□□□□□ -1.96
ATXN3-227ENST00000554491 IGKV4-1P06312 121 aa2.81□□□□□ -1.96
ATXN3-227ENST00000554491 KRTAP12-2P59991 146 aa2.81□□□□□ -1.96
ATXN3-227ENST00000554491 RPL39P62891 51 aaKnown RBP2.81□□□□□ -1.96
ATXN3-227ENST00000554491 HIGD2BQ4VC39 106 aa2.81□□□□□ -1.96
ATXN3-227ENST00000554491 CSAG1Q6PB30 78 aa2.81□□□□□ -1.96
ATXN3-227ENST00000554491 C5orf56Q8N8D9 126 aa2.81□□□□□ -1.96
ATXN3-227ENST00000554491 Q8TAT8 98 aa2.81□□□□□ -1.96
ATXN3-227ENST00000554491 PKHD1P08F94 4074 aa2.81□□□□□ -1.96
ATXN3-227ENST00000554491 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-227ENST00000554491 TRGV2A0A075B6R0 118 aa2.8□□□□□ -1.96
ATXN3-227ENST00000554491 A0A0J9YWU9 116 aa2.8□□□□□ -1.96
ATXN3-227ENST00000554491 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
ATXN3-227ENST00000554491 CMC4P56277 68 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-227ENST00000554491 KRTAP13-3Q3SY46 172 aa2.8□□□□□ -1.96
ATXN3-227ENST00000554491 REG3GQ6UW15 175 aa2.8□□□□□ -1.96
ATXN3-227ENST00000554491 Q6ZR54 194 aa2.8□□□□□ -1.96
ATXN3-227ENST00000554491 DYNC1H1Q14204 4646 aaKnown RBP2.8□□□□□ -1.96
ATXN3-227ENST00000554491 DNAH11Q96DT5 4516 aa2.79□□□□□ -1.96
ATXN3-227ENST00000554491 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.79□□□□□ -1.96
ATXN3-227ENST00000554491 H0Y9P7 68 aa2.79□□□□□ -1.96
ATXN3-227ENST00000554491 SPINK7P58062 85 aa2.79□□□□□ -1.96
ATXN3-227ENST00000554491 KRTAP10-8P60410 259 aa2.79□□□□□ -1.96
ATXN3-227ENST00000554491 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
ATXN3-227ENST00000554491 CSNK1G2-AS1Q8NCQ2 148 aa2.79□□□□□ -1.96
ATXN3-227ENST00000554491 CAMK2N2Q96S95 79 aa2.79□□□□□ -1.96
ATXN3-227ENST00000554491 KCNQ1DNQ9H478 68 aa2.79□□□□□ -1.96
ATXN3-227ENST00000554491 IGLV4-60A0A075B6I1 120 aa2.78□□□□□ -1.96
ATXN3-227ENST00000554491 IGKV2-28A0A075B6P5 120 aa2.78□□□□□ -1.96
ATXN3-227ENST00000554491 A6NDX4 124 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms