RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 HECTD4Q9Y4D8 3996 aa7.44□□□□□ -1.22
SHMT2-212ENST00000554467 MRPL55Q7Z7F7 128 aaKnown RBP7.43□□□□□ -1.22
SHMT2-212ENST00000554467 KCNQ1DNQ9H478 68 aa7.43□□□□□ -1.22
SHMT2-212ENST00000554467 IGLV1-50A0A075B6I6 118 aa7.43□□□□□ -1.22
SHMT2-212ENST00000554467 PMAIP1Q13794 54 aa7.42□□□□□ -1.22
SHMT2-212ENST00000554467 CNBPP62633 177 aaKnown RBP7.41□□□□□ -1.22
SHMT2-212ENST00000554467 Q6ZRN7 208 aaPredicted RBP7.41□□□□□ -1.22
SHMT2-212ENST00000554467 hDV103S1A0JD37 113 aa7.4□□□□□ -1.22
SHMT2-212ENST00000554467 PLA2G2DQ9UNK4 145 aa7.4□□□□□ -1.22
SHMT2-212ENST00000554467 ETDCA0A1B0GVM5 59 aa7.4□□□□□ -1.22
SHMT2-212ENST00000554467 PDE6GP18545 87 aa7.4□□□□□ -1.22
SHMT2-212ENST00000554467 Q9BRP9 147 aa7.4□□□□□ -1.22
SHMT2-212ENST00000554467 A8MU10 97 aa7.4□□□□□ -1.23
SHMT2-212ENST00000554467 C16orf90A8MZG2 172 aa7.39□□□□□ -1.23
SHMT2-212ENST00000554467 PANO1I0J062 215 aa7.39□□□□□ -1.23
SHMT2-212ENST00000554467 ST20-AS1Q8NBB2 130 aa7.39□□□□□ -1.23
SHMT2-212ENST00000554467 IGLV5-37A0A075B6J1 123 aa7.38□□□□□ -1.23
SHMT2-212ENST00000554467 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
SHMT2-212ENST00000554467 KRTAP11-1Q8IUC1 163 aa7.38□□□□□ -1.23
SHMT2-212ENST00000554467 LY6G6CO95867 125 aa7.37□□□□□ -1.23
SHMT2-212ENST00000554467 Q6ZRX8 168 aa7.37□□□□□ -1.23
SHMT2-212ENST00000554467 KRTAP4-16G5E9R7 235 aaPredicted RBP7.37□□□□□ -1.23
SHMT2-212ENST00000554467 UBE2BP63146 152 aa7.37□□□□□ -1.23
SHMT2-212ENST00000554467 Q1T7F1 81 aa7.37□□□□□ -1.23
SHMT2-212ENST00000554467 C1orf64Q8NEQ6 169 aa7.37□□□□□ -1.23
SHMT2-212ENST00000554467 PRLHP81277 87 aa7.37□□□□□ -1.23
SHMT2-212ENST00000554467 C14orf177Q52M58 125 aa7.37□□□□□ -1.23
SHMT2-212ENST00000554467 PSPHP1O15172 72 aa7.36□□□□□ -1.23
SHMT2-212ENST00000554467 H3BQ85 93 aa7.36□□□□□ -1.23
SHMT2-212ENST00000554467 REG3GQ6UW15 175 aa7.36□□□□□ -1.23
SHMT2-212ENST00000554467 A0A0G2JQZ4 141 aa7.35□□□□□ -1.23
SHMT2-212ENST00000554467 C9orf163Q8N9P6 203 aa7.35□□□□□ -1.23
SHMT2-212ENST00000554467 FAM30AQ9NZY2 134 aa7.35□□□□□ -1.23
SHMT2-212ENST00000554467 Q8N377 158 aa7.34□□□□□ -1.23
SHMT2-212ENST00000554467 SPRR1AP35321 89 aa7.34□□□□□ -1.23
SHMT2-212ENST00000554467 DNAH6Q9C0G6 4158 aa7.34□□□□□ -1.24
SHMT2-212ENST00000554467 A0A087WTM6 91 aa7.33□□□□□ -1.24
SHMT2-212ENST00000554467 SMIM29Q86T20 159 aa7.33□□□□□ -1.24
SHMT2-212ENST00000554467 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.33□□□□□ -1.24
SHMT2-212ENST00000554467 DNAH17Q9UFH2 4485 aa7.33□□□□□ -1.24
SHMT2-212ENST00000554467 TRAV22A0A0B4J277 110 aa7.32□□□□□ -1.24
SHMT2-212ENST00000554467 LCE6AA0A183 80 aa7.32□□□□□ -1.24
SHMT2-212ENST00000554467 DHRS4-AS1Q9P1J3 65 aa7.31□□□□□ -1.24
SHMT2-212ENST00000554467 HYDINQ4G0P3 5121 aa7.31□□□□□ -1.24
SHMT2-212ENST00000554467 Q6ZR54 194 aa7.31□□□□□ -1.24
SHMT2-212ENST00000554467 FRAS1Q86XX4 4008 aa7.3□□□□□ -1.24
SHMT2-212ENST00000554467 DEFB116Q30KQ4 102 aa7.3□□□□□ -1.24
SHMT2-212ENST00000554467 ZCCHC13Q8WW36 166 aaKnown RBP7.3□□□□□ -1.24
SHMT2-212ENST00000554467 C1orf137Q5JT78 98 aa7.3□□□□□ -1.24
SHMT2-212ENST00000554467 PRR4Q16378 134 aa7.28□□□□□ -1.24
SHMT2-212ENST00000554467 DNAH8Q96JB1 4490 aa7.28□□□□□ -1.24
SHMT2-212ENST00000554467 RTL8CO15255 209 aa7.28□□□□□ -1.24
SHMT2-212ENST00000554467 DNAH11Q96DT5 4516 aa7.27□□□□□ -1.24
SHMT2-212ENST00000554467 C1orf134Q5TEV5 83 aa7.27□□□□□ -1.24
SHMT2-212ENST00000554467 A8MUN3 132 aa7.27□□□□□ -1.25
SHMT2-212ENST00000554467 A0A1W2PNM2 257 aa7.25□□□□□ -1.25
SHMT2-212ENST00000554467 TNP2Q05952 138 aa7.25□□□□□ -1.25
SHMT2-212ENST00000554467 LINC00476Q8WZB0 136 aa7.25□□□□□ -1.25
SHMT2-212ENST00000554467 CD164Q04900 197 aa7.24□□□□□ -1.25
SHMT2-212ENST00000554467 SPACA4Q8TDM5 124 aa7.24□□□□□ -1.25
SHMT2-212ENST00000554467 WWC2-AS2Q96NR7 200 aa7.24□□□□□ -1.25
SHMT2-212ENST00000554467 DNAH5Q8TE73 4624 aa7.24□□□□□ -1.25
SHMT2-212ENST00000554467 IGLV5-48A0A075B6I7 105 aa7.23□□□□□ -1.25
SHMT2-212ENST00000554467 IGLV5-52A0A0A0MRZ9 124 aa7.23□□□□□ -1.25
SHMT2-212ENST00000554467 Q5VV11 94 aa7.23□□□□□ -1.25
SHMT2-212ENST00000554467 UBE2AP49459 152 aa7.23□□□□□ -1.25
SHMT2-212ENST00000554467 KRTAP21-3Q3LHN1 58 aa7.21□□□□□ -1.25
SHMT2-212ENST00000554467 CYP4F30PQ9H0H9 118 aa7.21□□□□□ -1.26
SHMT2-212ENST00000554467 FAT2Q9NYQ8 4349 aa7.2□□□□□ -1.26
SHMT2-212ENST00000554467 DSCR10P59022 87 aa7.2□□□□□ -1.26
SHMT2-212ENST00000554467 KRTAP10-2P60368 255 aa7.2□□□□□ -1.26
SHMT2-212ENST00000554467 ALMS1Q8TCU4 4167 aa7.19□□□□□ -1.26
SHMT2-212ENST00000554467 K7EQZ3 153 aa7.19□□□□□ -1.26
SHMT2-212ENST00000554467 Q8NBF4 154 aa7.19□□□□□ -1.26
SHMT2-212ENST00000554467 WFDC13Q8IUB5 93 aa7.18□□□□□ -1.26
SHMT2-212ENST00000554467 PKD1P98161 4303 aa7.18□□□□□ -1.26
SHMT2-212ENST00000554467 A0A087WSZ3 146 aa7.17□□□□□ -1.26
SHMT2-212ENST00000554467 RBM12B-AS1Q9P1G2 102 aa7.17□□□□□ -1.26
SHMT2-212ENST00000554467 SACSQ9NZJ4 4579 aa7.16□□□□□ -1.26
SHMT2-212ENST00000554467 PKHD1P08F94 4074 aa7.16□□□□□ -1.26
SHMT2-212ENST00000554467 RPL37AP61513 92 aaKnown RBP7.16□□□□□ -1.26
SHMT2-212ENST00000554467 PSORS1C2Q9UIG4 136 aa7.15□□□□□ -1.26
SHMT2-212ENST00000554467 IGFL1Q6UW32 110 aa7.15□□□□□ -1.26
SHMT2-212ENST00000554467 LCA10Q71F78 164 aa7.14□□□□□ -1.27
SHMT2-212ENST00000554467 ANAPC11Q9NYG5 84 aa7.14□□□□□ -1.27
SHMT2-212ENST00000554467 Q8N9P0 234 aaPredicted RBP7.14□□□□□ -1.27
SHMT2-212ENST00000554467 KTN1-AS1Q86SY8 53 aa7.13□□□□□ -1.27
SHMT2-212ENST00000554467 LRP1BQ9NZR2 4599 aa7.13□□□□□ -1.27
SHMT2-212ENST00000554467 KRTAP13-1Q8IUC0 172 aa7.13□□□□□ -1.27
SHMT2-212ENST00000554467 CHKB-CPT1BH3BT56 60 aa7.11□□□□□ -1.27
SHMT2-212ENST00000554467 PLAC8Q9NZF1 115 aa7.11□□□□□ -1.27
SHMT2-212ENST00000554467 IGLV9-49A0A0B4J1Y8 123 aa7.11□□□□□ -1.27
SHMT2-212ENST00000554467 H0Y9J4 135 aa7.11□□□□□ -1.27
SHMT2-212ENST00000554467 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
SHMT2-212ENST00000554467 HCG22E2RYF7 251 aa7.09□□□□□ -1.27
SHMT2-212ENST00000554467 SPTSSBQ8NFR3 76 aa7.09□□□□□ -1.27
SHMT2-212ENST00000554467 CIRBP-AS1Q8TBR5 109 aa7.09□□□□□ -1.27
SHMT2-212ENST00000554467 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
SHMT2-212ENST00000554467 A0A1B0GW54 56 aa7.08□□□□□ -1.28
SHMT2-212ENST00000554467 A6NN06 94 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms