RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PRLHP81277 87 aa7.77□□□□□ -1.17
SHMT2-211ENST00000554310 FAM19A1Q7Z5A9 133 aa7.77□□□□□ -1.17
SHMT2-211ENST00000554310 OBSCN-AS1Q96MR7 158 aa7.76□□□□□ -1.17
SHMT2-211ENST00000554310 PRYO14603 147 aa7.75□□□□□ -1.17
SHMT2-211ENST00000554310 ZNF73O43830 326 aaPredicted RBP7.75□□□□□ -1.17
SHMT2-211ENST00000554310 CRYGAP11844 174 aa7.75□□□□□ -1.17
SHMT2-211ENST00000554310 A0A087X002 238 aa7.74□□□□□ -1.17
SHMT2-211ENST00000554310 hADV29S1A0JD25 119 aa7.74□□□□□ -1.17
SHMT2-211ENST00000554310 H3BQ85 93 aa7.74□□□□□ -1.17
SHMT2-211ENST00000554310 TMEM256-PLSCR3K7ERE1 68 aa7.74□□□□□ -1.17
SHMT2-211ENST00000554310 ACYP1P07311 99 aa7.74□□□□□ -1.17
SHMT2-211ENST00000554310 COX7BP24311 80 aa7.74□□□□□ -1.17
SHMT2-211ENST00000554310 ELOF1P60002 83 aaKnown RBP7.74□□□□□ -1.17
SHMT2-211ENST00000554310 LRP2P98164 4655 aa7.74□□□□□ -1.17
SHMT2-211ENST00000554310 FAM229BQ4G0N7 80 aa7.74□□□□□ -1.17
SHMT2-211ENST00000554310 KCNQ1DNQ9H478 68 aa7.72□□□□□ -1.17
SHMT2-211ENST00000554310 JMJD7-PLA2G4BH0Y9G9 81 aa7.71□□□□□ -1.18
SHMT2-211ENST00000554310 SCGB1A1P11684 91 aa7.71□□□□□ -1.18
SHMT2-211ENST00000554310 SPRR1AP35321 89 aa7.71□□□□□ -1.18
SHMT2-211ENST00000554310 TYMSOSQ8TAI1 123 aa7.71□□□□□ -1.18
SHMT2-211ENST00000554310 HIGD2AQ9BW72 106 aa7.71□□□□□ -1.18
SHMT2-211ENST00000554310 GHRHP01286 108 aa7.7□□□□□ -1.18
SHMT2-211ENST00000554310 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.7□□□□□ -1.18
SHMT2-211ENST00000554310 ANAPC11Q9NYG5 84 aa7.69□□□□□ -1.18
SHMT2-211ENST00000554310 ZNF706Q9Y5V0 76 aaPredicted RBP7.69□□□□□ -1.18
SHMT2-211ENST00000554310 ETDCA0A1B0GVM5 59 aa7.68□□□□□ -1.18
SHMT2-211ENST00000554310 KRTAP4-16G5E9R7 235 aaPredicted RBP7.68□□□□□ -1.18
SHMT2-211ENST00000554310 PCP4P48539 62 aa7.68□□□□□ -1.18
SHMT2-211ENST00000554310 KRTAP13-2Q52LG2 175 aa7.68□□□□□ -1.18
SHMT2-211ENST00000554310 MT-ATP8P03928 68 aa7.67□□□□□ -1.18
SHMT2-211ENST00000554310 Q6ZQY7 126 aa7.67□□□□□ -1.18
SHMT2-211ENST00000554310 C14orf132Q9NPU4 83 aa7.67□□□□□ -1.18
SHMT2-211ENST00000554310 SPRR4Q96PI1 79 aa7.66□□□□□ -1.18
SHMT2-211ENST00000554310 GAGE2AQ6NT46 116 aa7.65□□□□□ -1.18
SHMT2-211ENST00000554310 LINC00304Q8N9R0 145 aa7.64□□□□□ -1.19
SHMT2-211ENST00000554310 B5MCH6 92 aa7.63□□□□□ -1.19
SHMT2-211ENST00000554310 CCKP06307 115 aa7.63□□□□□ -1.19
SHMT2-211ENST00000554310 SMCR5Q8TEV8 140 aa7.63□□□□□ -1.19
SHMT2-211ENST00000554310 Q6ZRX8 168 aa7.62□□□□□ -1.19
SHMT2-211ENST00000554310 LINC00643Q86TS7 51 aa7.62□□□□□ -1.19
SHMT2-211ENST00000554310 LOC110117498A0A087WWA1 95 aa7.61□□□□□ -1.19
SHMT2-211ENST00000554310 RBM3P98179 157 aaKnown RBP7.61□□□□□ -1.19
SHMT2-211ENST00000554310 PRR4Q16378 134 aa7.61□□□□□ -1.19
SHMT2-211ENST00000554310 Q6Q795 121 aa7.61□□□□□ -1.19
SHMT2-211ENST00000554310 DHRS4-AS1Q9P1J3 65 aa7.61□□□□□ -1.19
SHMT2-211ENST00000554310 LAMTOR3Q9UHA4 124 aa7.61□□□□□ -1.19
SHMT2-211ENST00000554310 PDE6GP18545 87 aa7.6□□□□□ -1.19
SHMT2-211ENST00000554310 C3orf22Q8N5N4 141 aa7.6□□□□□ -1.19
SHMT2-211ENST00000554310 C21orf62-AS1Q17RA5 79 aa7.59□□□□□ -1.19
SHMT2-211ENST00000554310 LINC00483Q53H64 154 aa7.59□□□□□ -1.19
SHMT2-211ENST00000554310 TRBV7-7A0A0K0K1E9 115 aa7.58□□□□□ -1.2
SHMT2-211ENST00000554310 Q6ZQT0 140 aa7.58□□□□□ -1.2
SHMT2-211ENST00000554310 Q9BRP9 147 aa7.58□□□□□ -1.2
SHMT2-211ENST00000554310 A0A1B0GV72 72 aa7.57□□□□□ -1.2
SHMT2-211ENST00000554310 NDUFV3P56181 108 aaKnown RBP7.57□□□□□ -1.2
SHMT2-211ENST00000554310 IMUPQ9GZP8 106 aa7.57□□□□□ -1.2
SHMT2-211ENST00000554310 LPAP08519 4548 aa7.57□□□□□ -1.2
SHMT2-211ENST00000554310 ERC2-IT1O76042 136 aa7.56□□□□□ -1.2
SHMT2-211ENST00000554310 SPAG11AQ6PDA7 123 aa7.56□□□□□ -1.2
SHMT2-211ENST00000554310 DSCR8Q96T75 97 aa7.56□□□□□ -1.2
SHMT2-211ENST00000554310 LINC00846Q9NV44 126 aa7.56□□□□□ -1.2
SHMT2-211ENST00000554310 RNF213Q63HN8 5207 aa7.55□□□□□ -1.2
SHMT2-211ENST00000554310 TRBV7-4A0A0J9YYF1 115 aa7.55□□□□□ -1.2
SHMT2-211ENST00000554310 Q6JHZ5 121 aa7.54□□□□□ -1.2
SHMT2-211ENST00000554310 IGLV5-48A0A075B6I7 105 aa7.53□□□□□ -1.2
SHMT2-211ENST00000554310 LINC01547P58512 204 aaPredicted RBP7.53□□□□□ -1.2
SHMT2-211ENST00000554310 Q8N377 158 aa7.53□□□□□ -1.2
SHMT2-211ENST00000554310 Q8NBF4 154 aa7.53□□□□□ -1.2
SHMT2-211ENST00000554310 C4orf48Q5BLP8 95 aa7.52□□□□□ -1.21
SHMT2-211ENST00000554310 RETNLBQ9BQ08 111 aa7.52□□□□□ -1.21
SHMT2-211ENST00000554310 IGLV9-49A0A0B4J1Y8 123 aa7.5□□□□□ -1.21
SHMT2-211ENST00000554310 MOBPQ13875 183 aa7.5□□□□□ -1.21
SHMT2-211ENST00000554310 SPINK1P00995 79 aa7.49□□□□□ -1.21
SHMT2-211ENST00000554310 ATP5EP2Q5VTU8 51 aa7.49□□□□□ -1.21
SHMT2-211ENST00000554310 SSBP3-AS1Q7Z2R9 100 aa7.49□□□□□ -1.21
SHMT2-211ENST00000554310 DEFB105AQ8NG35 78 aa7.49□□□□□ -1.21
SHMT2-211ENST00000554310 UBL5Q9BZL1 73 aa7.49□□□□□ -1.21
SHMT2-211ENST00000554310 ST20-AS1Q8NBB2 130 aa7.48□□□□□ -1.21
SHMT2-211ENST00000554310 RPS29P62273 56 aaKnown RBP7.47□□□□□ -1.21
SHMT2-211ENST00000554310 IGLV7-46A0A075B6I9 117 aa7.46□□□□□ -1.22
SHMT2-211ENST00000554310 SPRR1BP22528 89 aa7.46□□□□□ -1.22
SHMT2-211ENST00000554310 TPRXLQ17RH7 258 aa7.46□□□□□ -1.22
SHMT2-211ENST00000554310 C9orf153Q5TBE3 101 aa7.46□□□□□ -1.22
SHMT2-211ENST00000554310 FP248Q71RG6 208 aaPredicted RBP7.45□□□□□ -1.22
SHMT2-211ENST00000554310 IGKV3D-7A0A0C4DH55 119 aa7.44□□□□□ -1.22
SHMT2-211ENST00000554310 A0A1B0GW54 56 aa7.44□□□□□ -1.22
SHMT2-211ENST00000554310 Q6ZVQ6 151 aa7.43□□□□□ -1.22
SHMT2-211ENST00000554310 ANAPC13Q9BS18 74 aa7.43□□□□□ -1.22
SHMT2-211ENST00000554310 SMIM29Q86T20 159 aa7.42□□□□□ -1.22
SHMT2-211ENST00000554310 FAM236AA0A1B0GUQ0 79 aa7.41□□□□□ -1.22
SHMT2-211ENST00000554310 FAM236BA0A1B0GV22 79 aa7.41□□□□□ -1.22
SHMT2-211ENST00000554310 F8WEM9 126 aa7.4□□□□□ -1.22
SHMT2-211ENST00000554310 HIST1H4AP62805 103 aaKnown RBP7.4□□□□□ -1.22
SHMT2-211ENST00000554310 IGLV8-61A0A075B6I0 122 aa7.39□□□□□ -1.23
SHMT2-211ENST00000554310 CXCL6P80162 114 aa7.39□□□□□ -1.23
SHMT2-211ENST00000554310 A0A1W2PNM2 257 aa7.37□□□□□ -1.23
SHMT2-211ENST00000554310 ATOX1O00244 68 aa7.35□□□□□ -1.23
SHMT2-211ENST00000554310 KRTAP13-3Q3SY46 172 aa7.35□□□□□ -1.23
SHMT2-211ENST00000554310 LIMD2Q9BT23 127 aa7.35□□□□□ -1.23
SHMT2-211ENST00000554310 MUC2Q02817 5179 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms