RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 LINC00474Q9P2X8 69 aa8.16□□□□□ -1.1
SHMT2-205ENST00000553474 SMIM29Q86T20 159 aa8.15□□□□□ -1.11
SHMT2-205ENST00000553474 IGKV2-24A0A0C4DH68 120 aa8.14□□□□□ -1.11
SHMT2-205ENST00000553474 C9orf163Q8N9P6 203 aa8.14□□□□□ -1.11
SHMT2-205ENST00000553474 A0A1W2PNN7 141 aa8.13□□□□□ -1.11
SHMT2-205ENST00000553474 H7BZZ5 65 aa8.13□□□□□ -1.11
SHMT2-205ENST00000553474 NBDYA0A0U1RRE5 68 aa8.12□□□□□ -1.11
SHMT2-205ENST00000553474 LINC00476Q8WZB0 136 aa8.12□□□□□ -1.11
SHMT2-205ENST00000553474 OXTP01178 125 aa8.11□□□□□ -1.11
SHMT2-205ENST00000553474 SPRR1BP22528 89 aa8.11□□□□□ -1.11
SHMT2-205ENST00000553474 OCR1Q9BZK8 76 aa8.11□□□□□ -1.11
SHMT2-205ENST00000553474 LRCOL1A6NCL2 159 aa8.1□□□□□ -1.11
SHMT2-205ENST00000553474 CD164Q04900 197 aa8.1□□□□□ -1.11
SHMT2-205ENST00000553474 PLECQ15149 4684 aaKnown RBP8.1□□□□□ -1.11
SHMT2-205ENST00000553474 ATP5EP56381 51 aaPredicted RBP8.1□□□□□ -1.11
SHMT2-205ENST00000553474 Q8N9L7 120 aa8.1□□□□□ -1.11
SHMT2-205ENST00000553474 DNAH10Q8IVF4 4471 aa8.09□□□□□ -1.11
SHMT2-205ENST00000553474 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.09□□□□□ -1.11
SHMT2-205ENST00000553474 LY6G6CO95867 125 aa8.09□□□□□ -1.11
SHMT2-205ENST00000553474 PRLHP81277 87 aa8.09□□□□□ -1.11
SHMT2-205ENST00000553474 LYSTQ99698 3801 aa8.08□□□□□ -1.12
SHMT2-205ENST00000553474 IGFL1Q6UW32 110 aa8.08□□□□□ -1.12
SHMT2-205ENST00000553474 TMEM254Q8TBM7 123 aa8.08□□□□□ -1.12
SHMT2-205ENST00000553474 HIGD2AQ9BW72 106 aa8.08□□□□□ -1.12
SHMT2-205ENST00000553474 Q6ZRN7 208 aaPredicted RBP8.07□□□□□ -1.12
SHMT2-205ENST00000553474 EPM2AB3EWF7 344 aa8.05□□□□□ -1.12
SHMT2-205ENST00000553474 UBE2AP49459 152 aa8.05□□□□□ -1.12
SHMT2-205ENST00000553474 DSCR10P59022 87 aa8.05□□□□□ -1.12
SHMT2-205ENST00000553474 PHF5AQ7RTV0 110 aaKnown RBP8.05□□□□□ -1.12
SHMT2-205ENST00000553474 SNURFQ9Y675 71 aa8.05□□□□□ -1.12
SHMT2-205ENST00000553474 SERP1Q9Y6X1 66 aa8.05□□□□□ -1.12
SHMT2-205ENST00000553474 LCE6AA0A183 80 aa8.03□□□□□ -1.12
SHMT2-205ENST00000553474 CHTF8P0CG12 524 aa8.03□□□□□ -1.12
SHMT2-205ENST00000553474 A0A0U1RQV1 116 aa8.02□□□□□ -1.13
SHMT2-205ENST00000553474 PMAIP1Q13794 54 aa8.02□□□□□ -1.13
SHMT2-205ENST00000553474 ALMS1Q8TCU4 4167 aa8.02□□□□□ -1.13
SHMT2-205ENST00000553474 HCG22E2RYF7 251 aa8□□□□□ -1.13
SHMT2-205ENST00000553474 K7EQZ3 153 aa8□□□□□ -1.13
SHMT2-205ENST00000553474 KRTAP13-1Q8IUC0 172 aa7.99□□□□□ -1.13
SHMT2-205ENST00000553474 KRTAP11-1Q8IUC1 163 aa7.99□□□□□ -1.13
SHMT2-205ENST00000553474 A0A087WSZ3 146 aa7.99□□□□□ -1.13
SHMT2-205ENST00000553474 SPACA4Q8TDM5 124 aa7.99□□□□□ -1.13
SHMT2-205ENST00000553474 RPL37AP61513 92 aaKnown RBP7.97□□□□□ -1.13
SHMT2-205ENST00000553474 VPS13DQ5THJ4 4388 aa7.97□□□□□ -1.13
SHMT2-205ENST00000553474 SMIM26A0A096LP01 95 aa7.97□□□□□ -1.13
SHMT2-205ENST00000553474 A0A087WTM6 91 aa7.95□□□□□ -1.14
SHMT2-205ENST00000553474 FAM30AQ9NZY2 134 aa7.94□□□□□ -1.14
SHMT2-205ENST00000553474 BRK1Q8WUW1 75 aa7.93□□□□□ -1.14
SHMT2-205ENST00000553474 ZNF706Q9Y5V0 76 aaPredicted RBP7.93□□□□□ -1.14
SHMT2-205ENST00000553474 A0A0G2JQZ4 141 aa7.92□□□□□ -1.14
SHMT2-205ENST00000553474 PANO1I0J062 215 aa7.92□□□□□ -1.14
SHMT2-205ENST00000553474 LINC00483Q53H64 154 aa7.92□□□□□ -1.14
SHMT2-205ENST00000553474 LINC00472Q9H8W2 130 aa7.92□□□□□ -1.14
SHMT2-205ENST00000553474 A8MWP4 228 aa7.91□□□□□ -1.14
SHMT2-205ENST00000553474 Q6ZR54 194 aa7.91□□□□□ -1.14
SHMT2-205ENST00000553474 PRR15Q8IV56 129 aa7.91□□□□□ -1.14
SHMT2-205ENST00000553474 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.91□□□□□ -1.14
SHMT2-205ENST00000553474 KMT2AQ03164 3969 aa7.91□□□□□ -1.14
SHMT2-205ENST00000553474 KMT2CQ8NEZ4 4911 aaKnown RBP7.91□□□□□ -1.14
SHMT2-205ENST00000553474 ZCCHC13Q8WW36 166 aaKnown RBP7.9□□□□□ -1.14
SHMT2-205ENST00000553474 SACSQ9NZJ4 4579 aa7.89□□□□□ -1.15
SHMT2-205ENST00000553474 KRTAP29-1A8MX34 341 aaPredicted RBP7.89□□□□□ -1.15
SHMT2-205ENST00000553474 RTL8CO15255 209 aa7.89□□□□□ -1.15
SHMT2-205ENST00000553474 NDUFB1O75438 58 aa7.89□□□□□ -1.15
SHMT2-205ENST00000553474 PLAC8Q9NZF1 115 aa7.89□□□□□ -1.15
SHMT2-205ENST00000553474 HYDINQ4G0P3 5121 aa7.88□□□□□ -1.15
SHMT2-205ENST00000553474 C1orf134Q5TEV5 83 aa7.88□□□□□ -1.15
SHMT2-205ENST00000553474 H3BPC8 53 aa7.87□□□□□ -1.15
SHMT2-205ENST00000553474 MP68P56378 58 aa7.87□□□□□ -1.15
SHMT2-205ENST00000553474 IGLV5-52A0A0A0MRZ9 124 aa7.87□□□□□ -1.15
SHMT2-205ENST00000553474 DNAH6Q9C0G6 4158 aa7.86□□□□□ -1.15
SHMT2-205ENST00000553474 DEFB116Q30KQ4 102 aa7.86□□□□□ -1.15
SHMT2-205ENST00000553474 CASC2Q6XLA1 102 aa7.85□□□□□ -1.15
SHMT2-205ENST00000553474 WFDC13Q8IUB5 93 aa7.84□□□□□ -1.15
SHMT2-205ENST00000553474 RYR2Q92736 4967 aa7.84□□□□□ -1.15
SHMT2-205ENST00000553474 SRRM2Q9UQ35 2752 aaKnown RBP7.83□□□□□ -1.16
SHMT2-205ENST00000553474 HECTD4Q9Y4D8 3996 aa7.83□□□□□ -1.16
SHMT2-205ENST00000553474 ZNF861PO60384 105 aa7.83□□□□□ -1.16
SHMT2-205ENST00000553474 FP248Q71RG6 208 aaPredicted RBP7.83□□□□□ -1.16
SHMT2-205ENST00000553474 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
SHMT2-205ENST00000553474 DNAH17Q9UFH2 4485 aa7.82□□□□□ -1.16
SHMT2-205ENST00000553474 IGLV9-49A0A0B4J1Y8 123 aa7.8□□□□□ -1.16
SHMT2-205ENST00000553474 hDV103S1A0JD37 113 aa7.79□□□□□ -1.16
SHMT2-205ENST00000553474 MOBPQ13875 183 aa7.79□□□□□ -1.16
SHMT2-205ENST00000553474 CYP4F30PQ9H0H9 118 aa7.79□□□□□ -1.16
SHMT2-205ENST00000553474 DNAH2Q9P225 4427 aa7.79□□□□□ -1.16
SHMT2-205ENST00000553474 RYR3Q15413 4870 aa7.78□□□□□ -1.16
SHMT2-205ENST00000553474 Q96NJ1 140 aa7.78□□□□□ -1.16
SHMT2-205ENST00000553474 TRAV22A0A0B4J277 110 aa7.77□□□□□ -1.17
SHMT2-205ENST00000553474 MMP24-AS1A0A0U1RRL7 71 aa7.77□□□□□ -1.17
SHMT2-205ENST00000553474 TP53AIP1Q9HCN2 124 aa7.77□□□□□ -1.17
SHMT2-205ENST00000553474 ASB16-AS1Q495Z4 193 aa7.76□□□□□ -1.17
SHMT2-205ENST00000553474 SPANXA2-OT1Q8N9U9 137 aa7.76□□□□□ -1.17
SHMT2-205ENST00000553474 H0Y9P7 68 aa7.75□□□□□ -1.17
SHMT2-205ENST00000553474 H3BS24 57 aa7.75□□□□□ -1.17
SHMT2-205ENST00000553474 FRAS1Q86XX4 4008 aa7.75□□□□□ -1.17
SHMT2-205ENST00000553474 LINC00208Q96KT6 92 aa7.74□□□□□ -1.17
SHMT2-205ENST00000553474 IGLV7-43P04211 117 aa7.73□□□□□ -1.17
SHMT2-205ENST00000553474 DNAH8Q96JB1 4490 aa7.72□□□□□ -1.17
SHMT2-205ENST00000553474 CDK2AP2O75956 126 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms