RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 PMCHL2Q9BQD1 86 aa7.5□□□□□ -1.21
CACNB3-220ENST00000551716 MPLKIPQ8TAP9 179 aa7.49□□□□□ -1.21
CACNB3-220ENST00000551716 A6NDN8 102 aa7.47□□□□□ -1.21
CACNB3-220ENST00000551716 OCIAD2Q56VL3 154 aa7.47□□□□□ -1.21
CACNB3-220ENST00000551716 MTURNQ8N3F0 131 aa7.47□□□□□ -1.21
CACNB3-220ENST00000551716 COPS9Q8WXC6 57 aa7.47□□□□□ -1.21
CACNB3-220ENST00000551716 SERF1AO75920 110 aa7.46□□□□□ -1.22
CACNB3-220ENST00000551716 NDUFA5Q16718 116 aa7.46□□□□□ -1.22
CACNB3-220ENST00000551716 SLC7A5P1Q8MH63 180 aa7.46□□□□□ -1.22
CACNB3-220ENST00000551716 SS18L2Q9UHA2 77 aa7.45□□□□□ -1.22
CACNB3-220ENST00000551716 HRES1P13985 223 aa7.44□□□□□ -1.22
CACNB3-220ENST00000551716 KRTAP16-1A8MUX0 517 aa7.42□□□□□ -1.22
CACNB3-220ENST00000551716 FABP4P15090 132 aa7.42□□□□□ -1.22
CACNB3-220ENST00000551716 VAMP3Q15836 100 aa7.42□□□□□ -1.22
CACNB3-220ENST00000551716 Q6ZVH6 145 aa7.42□□□□□ -1.22
CACNB3-220ENST00000551716 A8MWP4 228 aa7.4□□□□□ -1.22
CACNB3-220ENST00000551716 MUC12Q9UKN1 5478 aa7.39□□□□□ -1.23
CACNB3-220ENST00000551716 SCGB1D1O95968 90 aa7.39□□□□□ -1.23
CACNB3-220ENST00000551716 IFITM1P13164 125 aa7.39□□□□□ -1.23
CACNB3-220ENST00000551716 NOTCH2NLQ7Z3S9 236 aa7.38□□□□□ -1.23
CACNB3-220ENST00000551716 SMIM11BQ8TCY0 68 aa7.38□□□□□ -1.23
CACNB3-220ENST00000551716 LINC00575Q6W349 94 aa7.37□□□□□ -1.23
CACNB3-220ENST00000551716 Q6ZQY7 126 aa7.37□□□□□ -1.23
CACNB3-220ENST00000551716 hADV29S1A0JD25 119 aa7.36□□□□□ -1.23
CACNB3-220ENST00000551716 SNAPINO95295 136 aa7.36□□□□□ -1.23
CACNB3-220ENST00000551716 DSCR10P59022 87 aa7.36□□□□□ -1.23
CACNB3-220ENST00000551716 PPDPFLQ8WWR9 84 aa7.36□□□□□ -1.23
CACNB3-220ENST00000551716 SNHG12Q9BXW3 62 aa7.36□□□□□ -1.23
CACNB3-220ENST00000551716 ANKRD39Q53RE8 183 aa7.35□□□□□ -1.23
CACNB3-220ENST00000551716 APOC3P02656 99 aa7.34□□□□□ -1.23
CACNB3-220ENST00000551716 LINC00310P59036 64 aa7.34□□□□□ -1.23
CACNB3-220ENST00000551716 LINC00313P59037 77 aa7.34□□□□□ -1.23
CACNB3-220ENST00000551716 SCGB1D4Q6XE38 83 aa7.34□□□□□ -1.23
CACNB3-220ENST00000551716 Q8N9P0 234 aaPredicted RBP7.33□□□□□ -1.24
CACNB3-220ENST00000551716 YPEL4Q96NS1 127 aa7.33□□□□□ -1.24
CACNB3-220ENST00000551716 SVBPQ8N300 66 aa7.32□□□□□ -1.24
CACNB3-220ENST00000551716 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.31□□□□□ -1.24
CACNB3-220ENST00000551716 TEN1Q86WV5 123 aa7.31□□□□□ -1.24
CACNB3-220ENST00000551716 S100A1P23297 94 aa7.3□□□□□ -1.24
CACNB3-220ENST00000551716 MUSTN1Q8IVN3 82 aa7.3□□□□□ -1.24
CACNB3-220ENST00000551716 TTTY13Q9BZ97 58 aa7.3□□□□□ -1.24
CACNB3-220ENST00000551716 SYS1-DBNDD2H3BUS1 97 aa7.29□□□□□ -1.24
CACNB3-220ENST00000551716 H3BUT2 72 aa7.29□□□□□ -1.24
CACNB3-220ENST00000551716 TRGC2P03986 189 aa7.29□□□□□ -1.24
CACNB3-220ENST00000551716 A0A087WSZ3 146 aa7.26□□□□□ -1.25
CACNB3-220ENST00000551716 COLCA2A8K830 154 aa7.26□□□□□ -1.25
CACNB3-220ENST00000551716 SIGMAR1Q99720 223 aa7.26□□□□□ -1.25
CACNB3-220ENST00000551716 LINC01545Q5VT33 79 aa7.25□□□□□ -1.25
CACNB3-220ENST00000551716 PET117Q6UWS5 81 aa7.23□□□□□ -1.25
CACNB3-220ENST00000551716 GHRHP01286 108 aa7.21□□□□□ -1.26
CACNB3-220ENST00000551716 C12orf57Q99622 126 aa7.2□□□□□ -1.26
CACNB3-220ENST00000551716 A6NN06 94 aa7.19□□□□□ -1.26
CACNB3-220ENST00000551716 SPINK7P58062 85 aa7.19□□□□□ -1.26
CACNB3-220ENST00000551716 IGKV4-1P06312 121 aa7.18□□□□□ -1.26
CACNB3-220ENST00000551716 KRTAP2-3P0C7H8 128 aa7.18□□□□□ -1.26
CACNB3-220ENST00000551716 BVES-AS1Q5T3Y7 98 aa7.18□□□□□ -1.26
CACNB3-220ENST00000551716 KRTAP2-4Q9BYR9 128 aa7.18□□□□□ -1.26
CACNB3-220ENST00000551716 SNCGO76070 127 aa7.16□□□□□ -1.26
CACNB3-220ENST00000551716 KRTAP5-9P26371 169 aa7.16□□□□□ -1.26
CACNB3-220ENST00000551716 NDUFV3P56181 108 aaKnown RBP7.15□□□□□ -1.26
CACNB3-220ENST00000551716 ZCCHC13Q8WW36 166 aaKnown RBP7.12□□□□□ -1.27
CACNB3-220ENST00000551716 MDN1Q9NU22 5596 aa7.11□□□□□ -1.27
CACNB3-220ENST00000551716 IGHV6-1A0A0B4J1U7 121 aa7.11□□□□□ -1.27
CACNB3-220ENST00000551716 C3orf79P0CE67 100 aa7.11□□□□□ -1.27
CACNB3-220ENST00000551716 FAM218AQ96MZ4 157 aa7.11□□□□□ -1.27
CACNB3-220ENST00000551716 H3BMG7 143 aa7.1□□□□□ -1.27
CACNB3-220ENST00000551716 KMT2DO14686 5537 aa7.1□□□□□ -1.27
CACNB3-220ENST00000551716 A0A1W2PNM2 257 aa7.08□□□□□ -1.28
CACNB3-220ENST00000551716 WFDC13Q8IUB5 93 aa7.08□□□□□ -1.28
CACNB3-220ENST00000551716 C8orf87E5RJ46 101 aa7.07□□□□□ -1.28
CACNB3-220ENST00000551716 TRBV7-4A0A0J9YYF1 115 aa7.05□□□□□ -1.28
CACNB3-220ENST00000551716 RAB37Q96AX2 223 aa7.05□□□□□ -1.28
CACNB3-220ENST00000551716 LINC00472Q9H8W2 130 aa7.05□□□□□ -1.28
CACNB3-220ENST00000551716 SMCPP49901 116 aaPredicted RBP7.03□□□□□ -1.28
CACNB3-220ENST00000551716 KRTDAPP60985 99 aa7.03□□□□□ -1.28
CACNB3-220ENST00000551716 DEFB116Q30KQ4 102 aa7.03□□□□□ -1.28
CACNB3-220ENST00000551716 H0YGX0 51 aa7.02□□□□□ -1.29
CACNB3-220ENST00000551716 H1FX-AS1Q4G0G2 97 aa7.02□□□□□ -1.29
CACNB3-220ENST00000551716 SNRPEP62304 92 aaKnown RBP7.01□□□□□ -1.29
CACNB3-220ENST00000551716 FABP2P12104 132 aa7□□□□□ -1.29
CACNB3-220ENST00000551716 ANKRD29Q8N6D5 301 aa7□□□□□ -1.29
CACNB3-220ENST00000551716 A0A1B0GVX0 72 aa6.99□□□□□ -1.29
CACNB3-220ENST00000551716 Q5VV11 94 aa6.99□□□□□ -1.29
CACNB3-220ENST00000551716 HIST1H2BKO60814 126 aa6.98□□□□□ -1.29
CACNB3-220ENST00000551716 HIST1H2BJP06899 126 aa6.98□□□□□ -1.29
CACNB3-220ENST00000551716 HIST1H2BOP23527 126 aa6.98□□□□□ -1.29
CACNB3-220ENST00000551716 HIST1H2BBP33778 126 aa6.98□□□□□ -1.29
CACNB3-220ENST00000551716 HIST1H2BDP58876 126 aa6.98□□□□□ -1.29
CACNB3-220ENST00000551716 HIST1H2BCP62807 126 aa6.98□□□□□ -1.29
CACNB3-220ENST00000551716 HIST2H2BEQ16778 126 aa6.98□□□□□ -1.29
CACNB3-220ENST00000551716 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.98□□□□□ -1.29
CACNB3-220ENST00000551716 ATOH7Q8N100 152 aa6.98□□□□□ -1.29
CACNB3-220ENST00000551716 HIST1H2BHQ93079 126 aa6.98□□□□□ -1.29
CACNB3-220ENST00000551716 HIST1H2BNQ99877 126 aa6.98□□□□□ -1.29
CACNB3-220ENST00000551716 HIST1H2BMQ99879 126 aa6.98□□□□□ -1.29
CACNB3-220ENST00000551716 KRTAP10-5P60370 271 aa6.97□□□□□ -1.29
CACNB3-220ENST00000551716 S100A6P06703 90 aa6.96□□□□□ -1.3
CACNB3-220ENST00000551716 LYRM7Q5U5X0 104 aa6.96□□□□□ -1.3
CACNB3-220ENST00000551716 TMA7Q9Y2S6 64 aaKnown RBP6.96□□□□□ -1.3
CACNB3-220ENST00000551716 MT1BP07438 61 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms