RNA–Protein interactions for RNA: ENST00000550309.1

AL355112.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL355112.1, Length 1,236 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355112.1-201ENST00000550309 IGKV2-40A0A087WW87 121 aaPredicted RBP2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 TRBV27A0A0K0K1C4 114 aa2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 NDUFC1O43677 76 aa2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 IGKV2D-40P01614 121 aaPredicted RBP2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 FUSP35637 526 aaKnown RBP eCLIP2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 ZNF56Q15929 161 aa2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 Q6ZQT0 140 aa2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 PHF5AQ7RTV0 110 aaKnown RBP2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 HUWE1Q7Z6Z7 4374 aaKnown RBP2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 TGP01266 2768 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 IGKV3-7A0A075B6H7 116 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 IBA57-AS1B1ANH7 110 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 H3BVH4 76 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 Q6ZTI0 123 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 RHPN1-AS1Q9BWJ2 59 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 WFDC10AQ9H1F0 79 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 TEX49A0A1B0GTD5 131 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 NUPR2A6NF83 97 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 IGIPA6NJ69 53 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 PPP1R17O96001 155 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 SNRPD3P62318 126 aaKnown RBP2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 DEFB135Q30KP9 77 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 Q8TAT8 98 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 TMEM141Q96I45 108 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 KLKP1Q107X0 134 aa2.91□□□□□ -1.94
AL355112.1-201ENST00000550309 SFTA2Q6UW10 78 aa2.91□□□□□ -1.94
AL355112.1-201ENST00000550309 CYSTM1Q9H1C7 97 aa2.91□□□□□ -1.94
AL355112.1-201ENST00000550309 LENEPQ9Y5L5 61 aa2.91□□□□□ -1.94
AL355112.1-201ENST00000550309 COL7A1Q02388 2944 aa2.91□□□□□ -1.94
AL355112.1-201ENST00000550309 DNAH7Q8WXX0 4024 aa2.9□□□□□ -1.94
AL355112.1-201ENST00000550309 A0A0G2JQZ4 141 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 TRBV6-5A0A0K0K1A5 114 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 LCE6AA0A183 80 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 TIMM17BO60830 172 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 CCKP06307 115 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 POLR2KP53803 58 aaKnown RBP2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 DEFB131AP59861 70 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 C2orf82Q6UX34 121 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 TIMM21Q9BVV7 248 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 H7BZZ5 65 aa2.89□□□□□ -1.95
AL355112.1-201ENST00000550309 MIFP14174 115 aa2.89□□□□□ -1.95
AL355112.1-201ENST00000550309 SPANXN1Q5VSR9 72 aa2.89□□□□□ -1.95
AL355112.1-201ENST00000550309 Q6JHZ5 121 aa2.89□□□□□ -1.95
AL355112.1-201ENST00000550309 MUSTN1Q8IVN3 82 aa2.89□□□□□ -1.95
AL355112.1-201ENST00000550309 RPL39LQ96EH5 51 aaKnown RBP2.89□□□□□ -1.95
AL355112.1-201ENST00000550309 TRGV4A0A0C4DH28 118 aa2.88□□□□□ -1.95
AL355112.1-201ENST00000550309 RHOHQ15669 191 aa2.88□□□□□ -1.95
AL355112.1-201ENST00000550309 Q1T7F1 81 aa2.88□□□□□ -1.95
AL355112.1-201ENST00000550309 ESRGQ1W209 222 aa2.88□□□□□ -1.95
AL355112.1-201ENST00000550309 TRAV13-2A0A0B4J235 113 aa2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 LY6G6CO95867 125 aa2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 COX6CP09669 75 aa2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 PRB4P10163 310 aaPredicted RBP2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 ATP5EP2Q5VTU8 51 aa2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 C22orf24Q9Y442 160 aa2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 STARD9Q9P2P6 4700 aa2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 LYSTQ99698 3801 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 ALMS1Q8TCU4 4167 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 TRAV10A0A0B4J240 114 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 TRAV21A0A0B4J279 112 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 TRBV10-3A0A0K0K1G6 114 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 I3L3M4 83 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 IGKV4-1P06312 121 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 RNASE3P12724 160 aaKnown RBP2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 TPRXLQ17RH7 258 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 LYPD5Q6UWN5 251 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 C7orf65Q6ZTY9 151 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 LINC00467Q9BRT7 94 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 KMT2CQ8NEZ4 4911 aaKnown RBP2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 DYNC2H1Q8NCM8 4307 aaKnown RBP2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 SPART-AS1P0CW21 52 aa2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 RPL39P62891 51 aaKnown RBP2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 ATP11AUNQ6ZP68 121 aa2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 CLEC2BQ92478 149 aa2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 DIRC1Q969H9 104 aa2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 OBSCN-AS1Q96MR7 158 aa2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 DEFB131BA0A096LNP1 70 aa2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 DEFB4AO15263 64 aa2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 MGPP08493 103 aa2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 RBM3P98179 157 aaKnown RBP2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 UBE2DNLQ8IWF7 75 aa2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 C9orf163Q8N9P6 203 aa2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 UBE2D4Q9Y2X8 147 aa2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 SACSQ9NZJ4 4579 aa2.84□□□□□ -1.96
AL355112.1-201ENST00000550309 RYR3Q15413 4870 aa2.84□□□□□ -1.96
AL355112.1-201ENST00000550309 CSMD3Q7Z407 3707 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 MUC4Q99102 2169 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 M0QY20 66 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 NDUFA1O15239 70 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 ERC2-IT1O76042 136 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 BAALC-AS2P0C853 105 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 SPINK13Q1W4C9 94 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 ASB16-AS1Q495Z4 193 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 S100A7L2Q5SY68 101 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 LINC00474Q9P2X8 69 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 NDUFA12Q9UI09 145 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 RYR2Q92736 4967 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 A6NN06 94 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms