RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 LINC00846Q9NV44 126 aa4.15□□□□□ -1.75
NPAS3-207ENST00000549770 PKHD1L1Q86WI1 4243 aa4.15□□□□□ -1.75
NPAS3-207ENST00000549770 FAT3Q8TDW7 4589 aa4.14□□□□□ -1.75
NPAS3-207ENST00000549770 IGKV3D-7A0A0C4DH55 119 aa4.14□□□□□ -1.75
NPAS3-207ENST00000549770 A0A1B0GUV1 79 aa4.14□□□□□ -1.75
NPAS3-207ENST00000549770 C14orf177Q52M58 125 aa4.14□□□□□ -1.75
NPAS3-207ENST00000549770 PRR26Q8N8Z3 221 aa4.14□□□□□ -1.75
NPAS3-207ENST00000549770 LRP1Q07954 4544 aaKnown RBP4.13□□□□□ -1.75
NPAS3-207ENST00000549770 TRBV6-5A0A0K0K1A5 114 aa4.13□□□□□ -1.75
NPAS3-207ENST00000549770 TMEM256-PLSCR3K7ERE1 68 aa4.13□□□□□ -1.75
NPAS3-207ENST00000549770 BAALC-AS2P0C853 105 aa4.13□□□□□ -1.75
NPAS3-207ENST00000549770 POLR2KP53803 58 aaKnown RBP4.13□□□□□ -1.75
NPAS3-207ENST00000549770 Q6ZSA8 131 aa4.13□□□□□ -1.75
NPAS3-207ENST00000549770 C7orf65Q6ZTY9 151 aa4.13□□□□□ -1.75
NPAS3-207ENST00000549770 LCA10Q71F78 164 aa4.13□□□□□ -1.75
NPAS3-207ENST00000549770 SCXQ7RTU7 201 aa4.13□□□□□ -1.75
NPAS3-207ENST00000549770 hDV103S1A0JD37 113 aa4.12□□□□□ -1.75
NPAS3-207ENST00000549770 FAM229BQ4G0N7 80 aa4.12□□□□□ -1.75
NPAS3-207ENST00000549770 HIGD2BQ4VC39 106 aa4.12□□□□□ -1.75
NPAS3-207ENST00000549770 RNASE13Q5GAN3 156 aaKnown RBP4.12□□□□□ -1.75
NPAS3-207ENST00000549770 ADAMTSL4-AS1Q5T5F5 129 aa4.12□□□□□ -1.75
NPAS3-207ENST00000549770 CHCHD10Q8WYQ3 142 aaPredicted RBP4.12□□□□□ -1.75
NPAS3-207ENST00000549770 A6NN06 94 aa4.11□□□□□ -1.75
NPAS3-207ENST00000549770 PANO1I0J062 215 aa4.11□□□□□ -1.75
NPAS3-207ENST00000549770 VCYO14598 125 aa4.11□□□□□ -1.75
NPAS3-207ENST00000549770 UBE2AP49459 152 aa4.11□□□□□ -1.75
NPAS3-207ENST00000549770 ATP11AUNQ6ZP68 121 aa4.11□□□□□ -1.75
NPAS3-207ENST00000549770 C15orf56Q8N910 161 aa4.11□□□□□ -1.75
NPAS3-207ENST00000549770 CIRBP-AS1Q8TBR5 109 aa4.11□□□□□ -1.75
NPAS3-207ENST00000549770 DIRC1Q969H9 104 aa4.11□□□□□ -1.75
NPAS3-207ENST00000549770 OPRPNQ99935 248 aaPredicted RBP4.11□□□□□ -1.75
NPAS3-207ENST00000549770 TRAV23DV6A0A075B6W5 121 aa4.1□□□□□ -1.75
NPAS3-207ENST00000549770 LINC00959A0A1B0GUT2 108 aa4.1□□□□□ -1.75
NPAS3-207ENST00000549770 PRYO14603 147 aa4.1□□□□□ -1.75
NPAS3-207ENST00000549770 CXCL6P80162 114 aa4.1□□□□□ -1.75
NPAS3-207ENST00000549770 CIRBPQ14011 172 aaKnown RBP4.1□□□□□ -1.75
NPAS3-207ENST00000549770 C9orf163Q8N9P6 203 aa4.1□□□□□ -1.75
NPAS3-207ENST00000549770 JMJD7-PLA2G4BH0Y9G9 81 aa4.09□□□□□ -1.75
NPAS3-207ENST00000549770 CHTF8P0CG12 524 aa4.09□□□□□ -1.75
NPAS3-207ENST00000549770 CNBPP62633 177 aaKnown RBP4.09□□□□□ -1.75
NPAS3-207ENST00000549770 RPL39P62891 51 aaKnown RBP4.09□□□□□ -1.75
NPAS3-207ENST00000549770 Q6ZRP5 223 aa4.09□□□□□ -1.75
NPAS3-207ENST00000549770 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
NPAS3-207ENST00000549770 CDC42SE2Q9NRR3 84 aa4.09□□□□□ -1.75
NPAS3-207ENST00000549770 H0YGX0 51 aa4.08□□□□□ -1.76
NPAS3-207ENST00000549770 NDUFA1O15239 70 aa4.08□□□□□ -1.76
NPAS3-207ENST00000549770 FLG2Q5D862 2391 aaPredicted RBP4.08□□□□□ -1.76
NPAS3-207ENST00000549770 SOSTDC1Q6X4U4 206 aa4.08□□□□□ -1.76
NPAS3-207ENST00000549770 TMEM254Q8TBM7 123 aa4.08□□□□□ -1.76
NPAS3-207ENST00000549770 LINC00167Q96N53 147 aa4.08□□□□□ -1.76
NPAS3-207ENST00000549770 UBL5Q9BZL1 73 aa4.08□□□□□ -1.76
NPAS3-207ENST00000549770 IGHV3-64A0A075B6Q5 118 aa4.07□□□□□ -1.76
NPAS3-207ENST00000549770 COX6A2Q02221 97 aa4.07□□□□□ -1.76
NPAS3-207ENST00000549770 CYP4F30PQ9H0H9 118 aa4.07□□□□□ -1.76
NPAS3-207ENST00000549770 C14orf132Q9NPU4 83 aa4.07□□□□□ -1.76
NPAS3-207ENST00000549770 A0A087X002 238 aa4.06□□□□□ -1.76
NPAS3-207ENST00000549770 GVQW2A0A096LPI5 108 aaPredicted RBP4.06□□□□□ -1.76
NPAS3-207ENST00000549770 IGKV2-24A0A0C4DH68 120 aa4.06□□□□□ -1.76
NPAS3-207ENST00000549770 A8MUN3 132 aa4.06□□□□□ -1.76
NPAS3-207ENST00000549770 KRTAP10-4P60372 401 aaPredicted RBP4.06□□□□□ -1.76
NPAS3-207ENST00000549770 RPL37AP61513 92 aaKnown RBP4.06□□□□□ -1.76
NPAS3-207ENST00000549770 SYCNQ0VAF6 134 aa4.06□□□□□ -1.76
NPAS3-207ENST00000549770 KIAA0087Q14695 138 aa4.06□□□□□ -1.76
NPAS3-207ENST00000549770 ASB16-AS1Q495Z4 193 aa4.06□□□□□ -1.76
NPAS3-207ENST00000549770 NKAPP1Q8N9T2 125 aa4.06□□□□□ -1.76
NPAS3-207ENST00000549770 FAM104AQ969W3 186 aa4.06□□□□□ -1.76
NPAS3-207ENST00000549770 NDUFA12Q9UI09 145 aa4.06□□□□□ -1.76
NPAS3-207ENST00000549770 SNURFQ9Y675 71 aa4.06□□□□□ -1.76
NPAS3-207ENST00000549770 A0A087WYN8 130 aa4.05□□□□□ -1.76
NPAS3-207ENST00000549770 NREPQ16612 68 aa4.05□□□□□ -1.76
NPAS3-207ENST00000549770 FAM218AQ96MZ4 157 aa4.05□□□□□ -1.76
NPAS3-207ENST00000549770 DMBT1Q9UGM3 2413 aaPredicted RBP4.05□□□□□ -1.76
NPAS3-207ENST00000549770 IGLV5-45A0A087WSX0 123 aa4.04□□□□□ -1.76
NPAS3-207ENST00000549770 A0A096LNI7 61 aa4.04□□□□□ -1.76
NPAS3-207ENST00000549770 TRAV22A0A0B4J277 110 aa4.04□□□□□ -1.76
NPAS3-207ENST00000549770 LINC00308Q8TCZ7 52 aa4.04□□□□□ -1.76
NPAS3-207ENST00000549770 SPACA4Q8TDM5 124 aa4.04□□□□□ -1.76
NPAS3-207ENST00000549770 ZNF625Q96I27 306 aaPredicted RBP4.04□□□□□ -1.76
NPAS3-207ENST00000549770 LOC110117498A0A087WWA1 95 aa4.03□□□□□ -1.76
NPAS3-207ENST00000549770 Q5VV11 94 aa4.03□□□□□ -1.76
NPAS3-207ENST00000549770 IGLV4-3A0A075B6K6 122 aa4.02□□□□□ -1.77
NPAS3-207ENST00000549770 A0A087WZ39 114 aa4.02□□□□□ -1.77
NPAS3-207ENST00000549770 A0A0J9YXV3 536 aa4.02□□□□□ -1.77
NPAS3-207ENST00000549770 PDE6GP18545 87 aa4.02□□□□□ -1.77
NPAS3-207ENST00000549770 SPAG11BQ08648 103 aa4.02□□□□□ -1.77
NPAS3-207ENST00000549770 Q75L30 129 aa4.02□□□□□ -1.77
NPAS3-207ENST00000549770 CAMK2N2Q96S95 79 aa4.02□□□□□ -1.77
NPAS3-207ENST00000549770 LIMD2Q9BT23 127 aa4.02□□□□□ -1.77
NPAS3-207ENST00000549770 PLAC8Q9NZF1 115 aa4.02□□□□□ -1.77
NPAS3-207ENST00000549770 ORMDL1Q9P0S3 153 aa4.02□□□□□ -1.77
NPAS3-207ENST00000549770 HMCN2Q8NDA2 5059 aa4.02□□□□□ -1.77
NPAS3-207ENST00000549770 IGHV3OR16-9A0A0B4J2B5 98 aa4.01□□□□□ -1.77
NPAS3-207ENST00000549770 IGLV5-39A0A0G2JS06 123 aa4.01□□□□□ -1.77
NPAS3-207ENST00000549770 OCR1Q9BZK8 76 aa4.01□□□□□ -1.77
NPAS3-207ENST00000549770 CDC42SE1Q9NRR8 79 aa4.01□□□□□ -1.77
NPAS3-207ENST00000549770 H3BQ85 93 aa4□□□□□ -1.77
NPAS3-207ENST00000549770 LINC01547P58512 204 aaPredicted RBP4□□□□□ -1.77
NPAS3-207ENST00000549770 LINC00242Q5T6M2 205 aa4□□□□□ -1.77
NPAS3-207ENST00000549770 C10orf25Q5T742 122 aa4□□□□□ -1.77
NPAS3-207ENST00000549770 FAM19A3Q7Z5A8 133 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms