RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 CIRBP-AS1Q8TBR5 109 aa4.49□□□□□ -1.69
DEPDC4-208ENST00000549341 C7orf33Q8WU49 177 aa4.49□□□□□ -1.69
DEPDC4-208ENST00000549341 ORMDL1Q9P0S3 153 aa4.49□□□□□ -1.69
DEPDC4-208ENST00000549341 PRO0461Q9UI25 63 aa4.49□□□□□ -1.69
DEPDC4-208ENST00000549341 A0A096LNI7 61 aa4.48□□□□□ -1.69
DEPDC4-208ENST00000549341 TMEM256-PLSCR3K7ERE1 68 aa4.48□□□□□ -1.69
DEPDC4-208ENST00000549341 BAALC-AS2P0C853 105 aa4.48□□□□□ -1.69
DEPDC4-208ENST00000549341 ETDBQ3ZM63 59 aa4.48□□□□□ -1.69
DEPDC4-208ENST00000549341 LINC00575Q6W349 94 aa4.48□□□□□ -1.69
DEPDC4-208ENST00000549341 TEN1Q86WV5 123 aa4.48□□□□□ -1.69
DEPDC4-208ENST00000549341 LINC01600Q96MT4 127 aa4.48□□□□□ -1.69
DEPDC4-208ENST00000549341 KCNQ1DNQ9H478 68 aa4.48□□□□□ -1.69
DEPDC4-208ENST00000549341 IGLV1-50A0A075B6I6 118 aa4.47□□□□□ -1.69
DEPDC4-208ENST00000549341 ELOF1P60002 83 aaKnown RBP4.47□□□□□ -1.69
DEPDC4-208ENST00000549341 UBE2BP63146 152 aa4.47□□□□□ -1.69
DEPDC4-208ENST00000549341 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.47□□□□□ -1.69
DEPDC4-208ENST00000549341 SDIM1Q6ZPB5 146 aa4.47□□□□□ -1.69
DEPDC4-208ENST00000549341 MTURNQ8N3F0 131 aa4.47□□□□□ -1.69
DEPDC4-208ENST00000549341 PPDPFLQ8WWR9 84 aa4.47□□□□□ -1.69
DEPDC4-208ENST00000549341 LINC00167Q96N53 147 aa4.47□□□□□ -1.69
DEPDC4-208ENST00000549341 DHRS4-AS1Q9P1J3 65 aa4.47□□□□□ -1.69
DEPDC4-208ENST00000549341 MUC2Q02817 5179 aa4.46□□□□□ -1.7
DEPDC4-208ENST00000549341 A0A087WYN8 130 aa4.46□□□□□ -1.7
DEPDC4-208ENST00000549341 REG3GQ6UW15 175 aa4.46□□□□□ -1.7
DEPDC4-208ENST00000549341 FAM218AQ96MZ4 157 aa4.46□□□□□ -1.7
DEPDC4-208ENST00000549341 FAM168BA1KXE4 195 aa4.45□□□□□ -1.7
DEPDC4-208ENST00000549341 RPL37AP8A6NKH3 93 aa4.45□□□□□ -1.7
DEPDC4-208ENST00000549341 JMJD7-PLA2G4BH0Y9G9 81 aa4.45□□□□□ -1.7
DEPDC4-208ENST00000549341 C21orf62-AS1Q17RA5 79 aa4.45□□□□□ -1.7
DEPDC4-208ENST00000549341 A0A1W2PNN7 141 aa4.44□□□□□ -1.7
DEPDC4-208ENST00000549341 SPACA4Q8TDM5 124 aa4.44□□□□□ -1.7
DEPDC4-208ENST00000549341 CHTF8P0CG12 524 aa4.43□□□□□ -1.7
DEPDC4-208ENST00000549341 SPRR1AP35321 89 aa4.43□□□□□ -1.7
DEPDC4-208ENST00000549341 B5MCH6 92 aa4.42□□□□□ -1.7
DEPDC4-208ENST00000549341 Q6ZQY7 126 aa4.42□□□□□ -1.7
DEPDC4-208ENST00000549341 Q6ZRX8 168 aa4.42□□□□□ -1.7
DEPDC4-208ENST00000549341 LAMTOR3Q9UHA4 124 aa4.42□□□□□ -1.7
DEPDC4-208ENST00000549341 ACYP1P07311 99 aa4.41□□□□□ -1.7
DEPDC4-208ENST00000549341 PDE6GP18545 87 aa4.41□□□□□ -1.7
DEPDC4-208ENST00000549341 UBE2AP49459 152 aa4.41□□□□□ -1.7
DEPDC4-208ENST00000549341 PHF5AQ7RTV0 110 aaKnown RBP4.41□□□□□ -1.7
DEPDC4-208ENST00000549341 FAM19A1Q7Z5A9 133 aa4.41□□□□□ -1.7
DEPDC4-208ENST00000549341 LPAP08519 4548 aa4.4□□□□□ -1.7
DEPDC4-208ENST00000549341 TEX49A0A1B0GTD5 131 aa4.4□□□□□ -1.71
DEPDC4-208ENST00000549341 H0Y9J4 135 aa4.4□□□□□ -1.71
DEPDC4-208ENST00000549341 KRTAP7-1Q8IUC3 87 aa4.4□□□□□ -1.71
DEPDC4-208ENST00000549341 VPS25Q9BRG1 176 aa4.4□□□□□ -1.71
DEPDC4-208ENST00000549341 PLAC8Q9NZF1 115 aa4.4□□□□□ -1.71
DEPDC4-208ENST00000549341 KRTAP4-16G5E9R7 235 aaPredicted RBP4.39□□□□□ -1.71
DEPDC4-208ENST00000549341 BCE1O60756 84 aa4.39□□□□□ -1.71
DEPDC4-208ENST00000549341 RBM3P98179 157 aaKnown RBP4.39□□□□□ -1.71
DEPDC4-208ENST00000549341 DSCR8Q96T75 97 aa4.39□□□□□ -1.71
DEPDC4-208ENST00000549341 FAM240AA0A1B0GVK7 77 aa4.38□□□□□ -1.71
DEPDC4-208ENST00000549341 F8WEM9 126 aa4.38□□□□□ -1.71
DEPDC4-208ENST00000549341 FSIP2Q5CZC0 6907 aa4.37□□□□□ -1.71
DEPDC4-208ENST00000549341 NDUFV3P56181 108 aaKnown RBP4.37□□□□□ -1.71
DEPDC4-208ENST00000549341 DEFB105AQ8NG35 78 aa4.37□□□□□ -1.71
DEPDC4-208ENST00000549341 SMCR5Q8TEV8 140 aa4.37□□□□□ -1.71
DEPDC4-208ENST00000549341 OBSCN-AS1Q96MR7 158 aa4.37□□□□□ -1.71
DEPDC4-208ENST00000549341 HIGD2AQ9BW72 106 aa4.37□□□□□ -1.71
DEPDC4-208ENST00000549341 ZNF706Q9Y5V0 76 aaPredicted RBP4.37□□□□□ -1.71
DEPDC4-208ENST00000549341 PANO1I0J062 215 aa4.36□□□□□ -1.71
DEPDC4-208ENST00000549341 GAGE2AQ6NT46 116 aa4.36□□□□□ -1.71
DEPDC4-208ENST00000549341 Q9BRP9 147 aa4.36□□□□□ -1.71
DEPDC4-208ENST00000549341 IGLV5-48A0A075B6I7 105 aa4.35□□□□□ -1.71
DEPDC4-208ENST00000549341 CCKP06307 115 aa4.35□□□□□ -1.71
DEPDC4-208ENST00000549341 PRLHP81277 87 aa4.35□□□□□ -1.71
DEPDC4-208ENST00000549341 C14orf132Q9NPU4 83 aa4.35□□□□□ -1.71
DEPDC4-208ENST00000549341 LOC110117498A0A087WWA1 95 aa4.34□□□□□ -1.71
DEPDC4-208ENST00000549341 A0A0U1RQV1 116 aa4.34□□□□□ -1.71
DEPDC4-208ENST00000549341 C1orf137Q5JT78 98 aa4.34□□□□□ -1.71
DEPDC4-208ENST00000549341 Q8N377 158 aa4.34□□□□□ -1.71
DEPDC4-208ENST00000549341 A0A1B0GV72 72 aa4.33□□□□□ -1.72
DEPDC4-208ENST00000549341 A0A1B0GW54 56 aa4.33□□□□□ -1.72
DEPDC4-208ENST00000549341 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
DEPDC4-208ENST00000549341 PSORS1C2Q9UIG4 136 aa4.33□□□□□ -1.72
DEPDC4-208ENST00000549341 ZNF861PO60384 105 aa4.32□□□□□ -1.72
DEPDC4-208ENST00000549341 SIGMAR1Q99720 223 aa4.32□□□□□ -1.72
DEPDC4-208ENST00000549341 UBL5Q9BZL1 73 aa4.32□□□□□ -1.72
DEPDC4-208ENST00000549341 TRBV7-4A0A0J9YYF1 115 aa4.31□□□□□ -1.72
DEPDC4-208ENST00000549341 ERC2-IT1O76042 136 aa4.31□□□□□ -1.72
DEPDC4-208ENST00000549341 SPRR1BP22528 89 aa4.31□□□□□ -1.72
DEPDC4-208ENST00000549341 Q6JHZ5 121 aa4.31□□□□□ -1.72
DEPDC4-208ENST00000549341 Q6ZQT0 140 aa4.31□□□□□ -1.72
DEPDC4-208ENST00000549341 ST20-AS1Q8NBB2 130 aa4.31□□□□□ -1.72
DEPDC4-208ENST00000549341 IGLV7-43P04211 117 aa4.3□□□□□ -1.72
DEPDC4-208ENST00000549341 LINC01547P58512 204 aaPredicted RBP4.3□□□□□ -1.72
DEPDC4-208ENST00000549341 LINC00643Q86TS7 51 aa4.3□□□□□ -1.72
DEPDC4-208ENST00000549341 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
DEPDC4-208ENST00000549341 KRTAP11-1Q8IUC1 163 aa4.3□□□□□ -1.72
DEPDC4-208ENST00000549341 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
DEPDC4-208ENST00000549341 ATP5EP2Q5VTU8 51 aa4.28□□□□□ -1.72
DEPDC4-208ENST00000549341 SPRR4Q96PI1 79 aa4.28□□□□□ -1.72
DEPDC4-208ENST00000549341 CDIP1Q9H305 208 aa4.28□□□□□ -1.72
DEPDC4-208ENST00000549341 IGLV8-61A0A075B6I0 122 aa4.27□□□□□ -1.73
DEPDC4-208ENST00000549341 LINC00483Q53H64 154 aa4.27□□□□□ -1.73
DEPDC4-208ENST00000549341 KRTAP10-8P60410 259 aa4.26□□□□□ -1.73
DEPDC4-208ENST00000549341 NREPQ16612 68 aa4.26□□□□□ -1.73
DEPDC4-208ENST00000549341 C9orf153Q5TBE3 101 aa4.26□□□□□ -1.73
DEPDC4-208ENST00000549341 SMIM29Q86T20 159 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms