RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 TSPEAR-AS2P59090 65 aa1.3□□□□□ -2.2
CNOT2-216ENST00000548939 HRCT1Q6UXD1 115 aa1.3□□□□□ -2.2
CNOT2-216ENST00000548939 ATP11AUNQ6ZP68 121 aa1.3□□□□□ -2.2
CNOT2-216ENST00000548939 MIR7-3HGQ8N6C7 128 aa1.3□□□□□ -2.2
CNOT2-216ENST00000548939 Q8N8P6 123 aa1.3□□□□□ -2.2
CNOT2-216ENST00000548939 MRAP2Q96G30 205 aa1.3□□□□□ -2.2
CNOT2-216ENST00000548939 SPRR4Q96PI1 79 aa1.3□□□□□ -2.2
CNOT2-216ENST00000548939 C12orf57Q99622 126 aa1.3□□□□□ -2.2
CNOT2-216ENST00000548939 ST20Q9HBF5 79 aa1.3□□□□□ -2.2
CNOT2-216ENST00000548939 NIT2Q9NQR4 276 aa1.3□□□□□ -2.2
CNOT2-216ENST00000548939 CDC42SE2Q9NRR3 84 aa1.3□□□□□ -2.2
CNOT2-216ENST00000548939 ZNF706Q9Y5V0 76 aaPredicted RBP1.3□□□□□ -2.2
CNOT2-216ENST00000548939 TRBV6-5A0A0K0K1A5 114 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 TRBV30A0A0K0K1B3 111 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 TRBV27A0A0K0K1C4 114 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 A0A1B0GW15 77 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 LINC01546A6NGU7 62 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 C11orf86A6NJI1 115 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 TMEM238C9JI98 176 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 SYS1-DBNDD2H3BUS1 97 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 I3L3M4 83 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 S100A8P05109 93 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 SPINK8P0C7L1 97 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 FCER1GP30273 86 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 RPS29P62273 56 aaKnown RBP1.29□□□□□ -2.2
CNOT2-216ENST00000548939 C9orf153Q5TBE3 101 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 SMIM15Q7Z3B0 74 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 TOMM6Q96B49 74 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 IFI27L1Q96BM0 104 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 CHCHD1Q96BP2 118 aaKnown RBP1.29□□□□□ -2.2
CNOT2-216ENST00000548939 C14orf144Q96I85 54 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 SCGB3A1Q96QR1 104 aa1.29□□□□□ -2.2
CNOT2-216ENST00000548939 CHTOPQ9Y3Y2 248 aaKnown RBP1.29□□□□□ -2.2
CNOT2-216ENST00000548939 IGIPA6NJ69 53 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 LINC00587B1AMM8 73 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 PPBPP02775 128 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 SMIM6P0DI80 62 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 ZNF22P17026 224 aaPredicted RBP1.28□□□□□ -2.2
CNOT2-216ENST00000548939 CKS1BP61024 79 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 NPC2P61916 151 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 JOSD1Q15040 202 aaPredicted RBP1.28□□□□□ -2.2
CNOT2-216ENST00000548939 SPATA45Q537H7 98 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 LINC01545Q5VT33 79 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 TEX43Q6ZNM6 134 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 C2orf91Q6ZV80 131 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 C20orf78Q9BR46 151 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 TMEM126AQ9H061 195 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 NXT2Q9NPJ8 142 aaKnown RBP1.28□□□□□ -2.2
CNOT2-216ENST00000548939 TOMM7Q9P0U1 55 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 CYSLTR1Q9Y271 337 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 LAMTOR2Q9Y2Q5 125 aa1.28□□□□□ -2.2
CNOT2-216ENST00000548939 F8VRH5 84 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 K7ERJ3 54 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 IGKCP01834 107 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 PMVKQ15126 192 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 BATFQ16520 125 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 C6orf99Q4VX62 202 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 ORMDL2Q53FV1 153 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 TMEM170BQ5T4T1 132 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 Q8NDZ9 215 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 ZNF625Q96I27 306 aaPredicted RBP1.27□□□□□ -2.21
CNOT2-216ENST00000548939 TMEM141Q96I45 108 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 AMELXQ99217 191 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 NAA38Q9BRA0 125 aaKnown RBP1.27□□□□□ -2.21
CNOT2-216ENST00000548939 LIMD2Q9BT23 127 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 VAMP8Q9BV40 100 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 MAP1LC3CQ9BXW4 147 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 CST9LQ9H4G1 147 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 GEMIN7Q9H840 131 aaKnown RBP1.27□□□□□ -2.21
CNOT2-216ENST00000548939 CDKN2A-AS1Q9UH64 79 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 HSPB8Q9UJY1 196 aa1.27□□□□□ -2.21
CNOT2-216ENST00000548939 TRAV12-1A0A0B4J245 112 aa1.26□□□□□ -2.21
CNOT2-216ENST00000548939 DPM2O94777 84 aa1.26□□□□□ -2.21
CNOT2-216ENST00000548939 IGLC3P0DOY3 106 aa1.26□□□□□ -2.21
CNOT2-216ENST00000548939 HINT1P49773 126 aaPredicted RBP1.26□□□□□ -2.21
CNOT2-216ENST00000548939 FXYD2P54710 66 aa1.26□□□□□ -2.21
CNOT2-216ENST00000548939 C6orf226Q5I0X4 101 aa1.26□□□□□ -2.21
CNOT2-216ENST00000548939 SOSTDC1Q6X4U4 206 aa1.26□□□□□ -2.21
CNOT2-216ENST00000548939 SSBP3-AS1Q7Z2R9 100 aa1.26□□□□□ -2.21
CNOT2-216ENST00000548939 FAM19A3Q7Z5A8 133 aa1.26□□□□□ -2.21
CNOT2-216ENST00000548939 MRPL52Q86TS9 123 aaKnown RBP1.26□□□□□ -2.21
CNOT2-216ENST00000548939 ZNF815PA8K554 130 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 H7C2G1 150 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 M0R378 163 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 ATP5LO75964 103 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 PPP1R17O96001 155 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 COX8AP10176 69 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 DDTP30046 118 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 MRPS36P82909 103 aaKnown RBP1.25□□□□□ -2.21
CNOT2-216ENST00000548939 SMAGPQ0VAQ4 97 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 SFTA2Q6UW10 78 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 SMCR5Q8TEV8 140 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 TIMM21Q9BVV7 248 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 SNHG12Q9BXW3 62 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 IMUPQ9GZP8 106 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 VCX2Q9H322 139 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 SPANXA1Q9NS26 97 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 RBM12B-AS1Q9P1G2 102 aa1.25□□□□□ -2.21
CNOT2-216ENST00000548939 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
CNOT2-216ENST00000548939 IGHV3OR16-9A0A0B4J2B5 98 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms