RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 Q6ZRX8 168 aa1.06□□□□□ -2.24
SNHG1-224ENST00000545688 ARL17AQ8IVW1 177 aa1.06□□□□□ -2.24
SNHG1-224ENST00000545688 C2orf88Q9BSF0 95 aa1.06□□□□□ -2.24
SNHG1-224ENST00000545688 OSTCQ9NRP0 149 aa1.06□□□□□ -2.24
SNHG1-224ENST00000545688 ERG28Q9UKR5 140 aa1.06□□□□□ -2.24
SNHG1-224ENST00000545688 V9GYV3 84 aa1.06□□□□□ -2.24
SNHG1-224ENST00000545688 ETDCA0A1B0GVM5 59 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 SMIM27A0A1W2PRY6 76 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 HMSDA8MTL9 139 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 K7EMI3 77 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 PPBPP02775 128 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 SPINK8P0C7L1 97 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 CKS2P33552 79 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 TAGLN2P37802 199 aaKnown RBP1.05□□□□□ -2.24
SNHG1-224ENST00000545688 ZNF345Q14585 488 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 C9orf153Q5TBE3 101 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 HRCT1Q6UXD1 115 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 SPRR2GQ9BYE4 73 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 BATF3Q9NR55 127 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 GNG13Q9P2W3 67 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 CYSLTR1Q9Y271 337 aa1.05□□□□□ -2.24
SNHG1-224ENST00000545688 TRBV10-2A0A0K0K1G8 114 aa1.04□□□□□ -2.24
SNHG1-224ENST00000545688 TMEM250H0YL14 139 aa1.04□□□□□ -2.24
SNHG1-224ENST00000545688 H7C2G1 150 aa1.04□□□□□ -2.24
SNHG1-224ENST00000545688 RAB5AP20339 215 aa1.04□□□□□ -2.24
SNHG1-224ENST00000545688 Q8N8P6 123 aa1.04□□□□□ -2.24
SNHG1-224ENST00000545688 BORCS7Q96B45 105 aa1.04□□□□□ -2.24
SNHG1-224ENST00000545688 TOMM6Q96B49 74 aa1.04□□□□□ -2.24
SNHG1-224ENST00000545688 OBSCN-AS1Q96MR7 158 aa1.04□□□□□ -2.24
SNHG1-224ENST00000545688 PRO1933Q9H354 126 aa1.04□□□□□ -2.24
SNHG1-224ENST00000545688 CST9LQ9H4G1 147 aa1.04□□□□□ -2.24
SNHG1-224ENST00000545688 LAMTOR2Q9Y2Q5 125 aa1.04□□□□□ -2.24
SNHG1-224ENST00000545688 FXYD6-FXYD2A0A087WZ82 144 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 LOC389332A0A1B0GUA5 103 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 A0A1B0GW15 77 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 LINC01546A6NGU7 62 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 IGLC3P0DOY3 106 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 ADCYAP1P18509 176 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 AKR1D1P51857 326 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 NDUFA6P56556 154 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 BOD1L2Q8IYS8 172 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 S100ZQ8WXG8 99 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 PRELID3AQ96N28 172 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 RBM12B-AS1Q9P1G2 102 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 LAMTOR3Q9UHA4 124 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 NAT8BQ9UHF3 227 aa1.03□□□□□ -2.24
SNHG1-224ENST00000545688 IGLV5-48A0A075B6I7 105 aa1.02□□□□□ -2.25
SNHG1-224ENST00000545688 FAM236DA0A1B0GTK5 79 aa1.02□□□□□ -2.25
SNHG1-224ENST00000545688 NCR3O14931 201 aa1.02□□□□□ -2.25
SNHG1-224ENST00000545688 ARPC5O15511 151 aa1.02□□□□□ -2.25
SNHG1-224ENST00000545688 TCL1BO95988 128 aa1.02□□□□□ -2.25
SNHG1-224ENST00000545688 FAM236CP0DP71 79 aa1.02□□□□□ -2.25
SNHG1-224ENST00000545688 ZNF22P17026 224 aaPredicted RBP1.02□□□□□ -2.25
SNHG1-224ENST00000545688 DDTP30046 118 aa1.02□□□□□ -2.25
SNHG1-224ENST00000545688 JOSD1Q15040 202 aaPredicted RBP1.02□□□□□ -2.25
SNHG1-224ENST00000545688 Q5VV11 94 aa1.02□□□□□ -2.25
SNHG1-224ENST00000545688 SFTA2Q6UW10 78 aa1.02□□□□□ -2.25
SNHG1-224ENST00000545688 F8W036 122 aa1.01□□□□□ -2.25
SNHG1-224ENST00000545688 H3BRM9 83 aa1.01□□□□□ -2.25
SNHG1-224ENST00000545688 TEX46H3BTG2 121 aa1.01□□□□□ -2.25
SNHG1-224ENST00000545688 NDUFC2O95298 119 aa1.01□□□□□ -2.25
SNHG1-224ENST00000545688 S100A8P05109 93 aa1.01□□□□□ -2.25
SNHG1-224ENST00000545688 SMIM13P0DJ93 91 aa1.01□□□□□ -2.25
SNHG1-224ENST00000545688 G0S2P27469 103 aa1.01□□□□□ -2.25
SNHG1-224ENST00000545688 LINC00158P58513 81 aa1.01□□□□□ -2.25
SNHG1-224ENST00000545688 PMVKQ15126 192 aa1.01□□□□□ -2.25
SNHG1-224ENST00000545688 ATP5L2Q7Z4Y8 100 aa1.01□□□□□ -2.25
SNHG1-224ENST00000545688 KRTAP8-1Q8IUC2 63 aa1.01□□□□□ -2.25
SNHG1-224ENST00000545688 Q96NJ1 140 aa1.01□□□□□ -2.25
SNHG1-224ENST00000545688 MAP1LC3AQ9H492 121 aa1.01□□□□□ -2.25
SNHG1-224ENST00000545688 NXT2Q9NPJ8 142 aaKnown RBP1.01□□□□□ -2.25
SNHG1-224ENST00000545688 TRAV23DV6A0A075B6W5 121 aa1□□□□□ -2.25
SNHG1-224ENST00000545688 TRBV7-7A0A0K0K1E9 115 aa1□□□□□ -2.25
SNHG1-224ENST00000545688 TEX49A0A1B0GTD5 131 aa1□□□□□ -2.25
SNHG1-224ENST00000545688 LINC01549A6NIU2 74 aa1□□□□□ -2.25
SNHG1-224ENST00000545688 C11orf86A6NJI1 115 aa1□□□□□ -2.25
SNHG1-224ENST00000545688 SRP19P09132 144 aaKnown RBP1□□□□□ -2.25
SNHG1-224ENST00000545688 CEBPGP53567 150 aa1□□□□□ -2.25
SNHG1-224ENST00000545688 ELOF1P60002 83 aaKnown RBP1□□□□□ -2.25
SNHG1-224ENST00000545688 SOSTDC1Q6X4U4 206 aa1□□□□□ -2.25
SNHG1-224ENST00000545688 SCGB3A1Q96QR1 104 aa1□□□□□ -2.25
SNHG1-224ENST00000545688 SMIM7Q9BQ49 75 aa1□□□□□ -2.25
SNHG1-224ENST00000545688 SPANXB1Q9NS25 103 aaPredicted RBP1□□□□□ -2.25
SNHG1-224ENST00000545688 KANTRA0A1W2PQU2 76 aa0.99□□□□□ -2.25
SNHG1-224ENST00000545688 SMLR1H3BR10 107 aa0.99□□□□□ -2.25
SNHG1-224ENST00000545688 PSPHP1O15172 72 aa0.99□□□□□ -2.25
SNHG1-224ENST00000545688 MT1XP80297 61 aa0.99□□□□□ -2.25
SNHG1-224ENST00000545688 S100A12P80511 92 aa0.99□□□□□ -2.25
SNHG1-224ENST00000545688 MRPL54Q6P161 138 aaKnown RBP0.99□□□□□ -2.25
SNHG1-224ENST00000545688 LINC00587B1AMM8 73 aa0.98□□□□□ -2.25
SNHG1-224ENST00000545688 C9JQL5 133 aa0.98□□□□□ -2.25
SNHG1-224ENST00000545688 RGS21Q2M5E4 152 aa0.98□□□□□ -2.25
SNHG1-224ENST00000545688 TRBV7-6A0A0J9YX20 115 aa0.97□□□□□ -2.25
SNHG1-224ENST00000545688 SPINK7P58062 85 aa0.97□□□□□ -2.25
SNHG1-224ENST00000545688 TAL2Q16559 108 aa0.97□□□□□ -2.25
SNHG1-224ENST00000545688 MEIG1Q5JSS6 88 aa0.97□□□□□ -2.25
SNHG1-224ENST00000545688 NAT8Q9UHE5 227 aa0.97□□□□□ -2.25
SNHG1-224ENST00000545688 ZNF815PA8K554 130 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 LST1O00453 97 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 HBDP02042 147 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms