RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 A0A096LNI7 61 aa4.45□□□□□ -1.7
HMGCS2-204ENST00000544913 A0A1B0GVY2 172 aa4.45□□□□□ -1.7
HMGCS2-204ENST00000544913 A0A1B0GW54 56 aa4.45□□□□□ -1.7
HMGCS2-204ENST00000544913 PRYO14603 147 aa4.45□□□□□ -1.7
HMGCS2-204ENST00000544913 COX7CP15954 63 aa4.45□□□□□ -1.7
HMGCS2-204ENST00000544913 FAM19A1Q7Z5A9 133 aa4.45□□□□□ -1.7
HMGCS2-204ENST00000544913 HIST1H4AP62805 103 aaKnown RBP4.44□□□□□ -1.7
HMGCS2-204ENST00000544913 APOBP04114 4563 aaKnown RBP4.44□□□□□ -1.7
HMGCS2-204ENST00000544913 TRBV7-4A0A0J9YYF1 115 aa4.44□□□□□ -1.7
HMGCS2-204ENST00000544913 FAM168BA1KXE4 195 aa4.44□□□□□ -1.7
HMGCS2-204ENST00000544913 CHTF8P0CG12 524 aa4.44□□□□□ -1.7
HMGCS2-204ENST00000544913 SERTAD4-AS1Q5TG53 156 aa4.44□□□□□ -1.7
HMGCS2-204ENST00000544913 BCE1O60756 84 aa4.43□□□□□ -1.7
HMGCS2-204ENST00000544913 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.43□□□□□ -1.7
HMGCS2-204ENST00000544913 IGLV1-50A0A075B6I6 118 aa4.42□□□□□ -1.7
HMGCS2-204ENST00000544913 C16orf90A8MZG2 172 aa4.42□□□□□ -1.7
HMGCS2-204ENST00000544913 EPM2AB3EWF7 344 aa4.42□□□□□ -1.7
HMGCS2-204ENST00000544913 SPRR1AP35321 89 aa4.42□□□□□ -1.7
HMGCS2-204ENST00000544913 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
HMGCS2-204ENST00000544913 CXCL6P80162 114 aa4.42□□□□□ -1.7
HMGCS2-204ENST00000544913 IGKV3D-7A0A0C4DH55 119 aa4.41□□□□□ -1.7
HMGCS2-204ENST00000544913 ETDCA0A1B0GVM5 59 aa4.41□□□□□ -1.7
HMGCS2-204ENST00000544913 A0A1W2PNN7 141 aa4.41□□□□□ -1.7
HMGCS2-204ENST00000544913 Q6ZRX8 168 aa4.41□□□□□ -1.7
HMGCS2-204ENST00000544913 SPACA4Q8TDM5 124 aa4.41□□□□□ -1.7
HMGCS2-204ENST00000544913 EPPK1P58107 5090 aaKnown RBP4.41□□□□□ -1.7
HMGCS2-204ENST00000544913 IGLV5-52A0A0A0MRZ9 124 aa4.4□□□□□ -1.7
HMGCS2-204ENST00000544913 KRTAP10-1P60331 282 aa4.4□□□□□ -1.7
HMGCS2-204ENST00000544913 PMAIP1Q13794 54 aa4.4□□□□□ -1.7
HMGCS2-204ENST00000544913 Q6ZSA8 131 aa4.4□□□□□ -1.7
HMGCS2-204ENST00000544913 MRPL55Q7Z7F7 128 aaKnown RBP4.4□□□□□ -1.7
HMGCS2-204ENST00000544913 IGKV2-24A0A0C4DH68 120 aa4.4□□□□□ -1.71
HMGCS2-204ENST00000544913 KRTAP11-1Q8IUC1 163 aa4.4□□□□□ -1.71
HMGCS2-204ENST00000544913 FAM30AQ9NZY2 134 aa4.4□□□□□ -1.71
HMGCS2-204ENST00000544913 IGLV5-48A0A075B6I7 105 aa4.39□□□□□ -1.71
HMGCS2-204ENST00000544913 KRTAP4-16G5E9R7 235 aaPredicted RBP4.39□□□□□ -1.71
HMGCS2-204ENST00000544913 Q6ZVQ6 151 aa4.39□□□□□ -1.71
HMGCS2-204ENST00000544913 SERP2Q8N6R1 65 aa4.39□□□□□ -1.71
HMGCS2-204ENST00000544913 LCE2CQ5TA81 110 aa4.38□□□□□ -1.71
HMGCS2-204ENST00000544913 FAT1Q14517 4588 aa4.38□□□□□ -1.71
HMGCS2-204ENST00000544913 LINC01547P58512 204 aaPredicted RBP4.38□□□□□ -1.71
HMGCS2-204ENST00000544913 REG3GQ6UW15 175 aa4.38□□□□□ -1.71
HMGCS2-204ENST00000544913 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
HMGCS2-204ENST00000544913 SERP1Q9Y6X1 66 aa4.38□□□□□ -1.71
HMGCS2-204ENST00000544913 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
HMGCS2-204ENST00000544913 HAMPP81172 84 aa4.37□□□□□ -1.71
HMGCS2-204ENST00000544913 Q8N377 158 aa4.37□□□□□ -1.71
HMGCS2-204ENST00000544913 LINC00474Q9P2X8 69 aa4.37□□□□□ -1.71
HMGCS2-204ENST00000544913 SRRM2Q9UQ35 2752 aaKnown RBP4.37□□□□□ -1.71
HMGCS2-204ENST00000544913 SMIM26A0A096LP01 95 aa4.36□□□□□ -1.71
HMGCS2-204ENST00000544913 RPL37AP8A6NKH3 93 aa4.36□□□□□ -1.71
HMGCS2-204ENST00000544913 PLAC8Q9NZF1 115 aa4.36□□□□□ -1.71
HMGCS2-204ENST00000544913 HSPG2P98160 4391 aa4.36□□□□□ -1.71
HMGCS2-204ENST00000544913 KRTAP9-6A0A140TA67 174 aa4.36□□□□□ -1.71
HMGCS2-204ENST00000544913 OXTP01178 125 aa4.36□□□□□ -1.71
HMGCS2-204ENST00000544913 NREPQ16612 68 aa4.36□□□□□ -1.71
HMGCS2-204ENST00000544913 RYR1P21817 5038 aa4.36□□□□□ -1.71
HMGCS2-204ENST00000544913 KIAA1109Q2LD37 5005 aa4.36□□□□□ -1.71
HMGCS2-204ENST00000544913 PHF5AQ7RTV0 110 aaKnown RBP4.35□□□□□ -1.71
HMGCS2-204ENST00000544913 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
HMGCS2-204ENST00000544913 VPS13BQ7Z7G8 4022 aa4.35□□□□□ -1.71
HMGCS2-204ENST00000544913 A0A087WVE0 104 aa4.34□□□□□ -1.71
HMGCS2-204ENST00000544913 H0Y9J4 135 aa4.34□□□□□ -1.71
HMGCS2-204ENST00000544913 UBE2BP63146 152 aa4.34□□□□□ -1.71
HMGCS2-204ENST00000544913 DEFB105AQ8NG35 78 aa4.34□□□□□ -1.71
HMGCS2-204ENST00000544913 Q9BRP9 147 aa4.34□□□□□ -1.71
HMGCS2-204ENST00000544913 A0A0U1RQV1 116 aa4.34□□□□□ -1.71
HMGCS2-204ENST00000544913 F8WEM9 126 aa4.34□□□□□ -1.71
HMGCS2-204ENST00000544913 SCXQ7RTU7 201 aa4.34□□□□□ -1.71
HMGCS2-204ENST00000544913 CIRBP-AS1Q8TBR5 109 aa4.34□□□□□ -1.71
HMGCS2-204ENST00000544913 TRAV7A0A075B6U4 112 aa4.33□□□□□ -1.72
HMGCS2-204ENST00000544913 C1orf137Q5JT78 98 aa4.33□□□□□ -1.72
HMGCS2-204ENST00000544913 PRR15Q8IV56 129 aa4.33□□□□□ -1.72
HMGCS2-204ENST00000544913 SPRR4Q96PI1 79 aa4.33□□□□□ -1.72
HMGCS2-204ENST00000544913 BPY2O14599 106 aa4.32□□□□□ -1.72
HMGCS2-204ENST00000544913 Q8NBF4 154 aa4.32□□□□□ -1.72
HMGCS2-204ENST00000544913 LORP23490 312 aaPredicted RBP4.31□□□□□ -1.72
HMGCS2-204ENST00000544913 IGLV8-61A0A075B6I0 122 aa4.31□□□□□ -1.72
HMGCS2-204ENST00000544913 ATP5EP56381 51 aaPredicted RBP4.31□□□□□ -1.72
HMGCS2-204ENST00000544913 KRTAP13-1Q8IUC0 172 aa4.31□□□□□ -1.72
HMGCS2-204ENST00000544913 ERC2-IT1O76042 136 aa4.29□□□□□ -1.72
HMGCS2-204ENST00000544913 SPRR1BP22528 89 aa4.29□□□□□ -1.72
HMGCS2-204ENST00000544913 ST20-AS1Q8NBB2 130 aa4.29□□□□□ -1.72
HMGCS2-204ENST00000544913 A0A1W2PNM2 257 aa4.29□□□□□ -1.72
HMGCS2-204ENST00000544913 SMIM29Q86T20 159 aa4.29□□□□□ -1.72
HMGCS2-204ENST00000544913 PSORS1C2Q9UIG4 136 aa4.29□□□□□ -1.72
HMGCS2-204ENST00000544913 NDUFC1O43677 76 aa4.28□□□□□ -1.72
HMGCS2-204ENST00000544913 KRTAP10-4P60372 401 aaPredicted RBP4.28□□□□□ -1.72
HMGCS2-204ENST00000544913 LCE3BQ5TA77 95 aa4.28□□□□□ -1.72
HMGCS2-204ENST00000544913 BIRC6Q9NR09 4857 aa4.28□□□□□ -1.73
HMGCS2-204ENST00000544913 IGKV4-1P06312 121 aa4.27□□□□□ -1.73
HMGCS2-204ENST00000544913 PRLHP81277 87 aa4.27□□□□□ -1.73
HMGCS2-204ENST00000544913 KLKP1Q107X0 134 aa4.27□□□□□ -1.73
HMGCS2-204ENST00000544913 HIGD2AQ9BW72 106 aa4.27□□□□□ -1.73
HMGCS2-204ENST00000544913 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
HMGCS2-204ENST00000544913 UBE2AP49459 152 aa4.26□□□□□ -1.73
HMGCS2-204ENST00000544913 RPL37AP61513 92 aaKnown RBP4.25□□□□□ -1.73
HMGCS2-204ENST00000544913 H3BS24 57 aa4.25□□□□□ -1.73
HMGCS2-204ENST00000544913 IGFL1Q6UW32 110 aa4.25□□□□□ -1.73
HMGCS2-204ENST00000544913 C20orf197Q8N268 126 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms