RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 IGLV5-48A0A075B6I7 105 aa9.7□□□□□ -0.86
XRCC1-202ENST00000543982 NDUFV3P56181 108 aaKnown RBP9.7□□□□□ -0.86
XRCC1-202ENST00000543982 RBM3P98179 157 aaKnown RBP9.7□□□□□ -0.86
XRCC1-202ENST00000543982 FAM240AA0A1B0GVK7 77 aa9.69□□□□□ -0.86
XRCC1-202ENST00000543982 KRTAP10-4P60372 401 aaPredicted RBP9.69□□□□□ -0.86
XRCC1-202ENST00000543982 ZNF861PO60384 105 aa9.67□□□□□ -0.86
XRCC1-202ENST00000543982 CDK2AP2O75956 126 aa9.67□□□□□ -0.86
XRCC1-202ENST00000543982 ACYP1P07311 99 aa9.66□□□□□ -0.86
XRCC1-202ENST00000543982 RPL37AP61513 92 aaKnown RBP9.65□□□□□ -0.86
XRCC1-202ENST00000543982 GAGE2AQ6NT46 116 aa9.65□□□□□ -0.86
XRCC1-202ENST00000543982 CDIP1Q9H305 208 aa9.65□□□□□ -0.86
XRCC1-202ENST00000543982 DSCR8Q96T75 97 aa9.64□□□□□ -0.87
XRCC1-202ENST00000543982 CCKP06307 115 aa9.64□□□□□ -0.87
XRCC1-202ENST00000543982 LOC110117498A0A087WWA1 95 aa9.63□□□□□ -0.87
XRCC1-202ENST00000543982 PDE6GP18545 87 aa9.63□□□□□ -0.87
XRCC1-202ENST00000543982 Q6ZQT0 140 aa9.62□□□□□ -0.87
XRCC1-202ENST00000543982 ANAPC11Q9NYG5 84 aa9.62□□□□□ -0.87
XRCC1-202ENST00000543982 TRBV7-4A0A0J9YYF1 115 aa9.61□□□□□ -0.87
XRCC1-202ENST00000543982 C3orf22Q8N5N4 141 aa9.61□□□□□ -0.87
XRCC1-202ENST00000543982 BIRC6Q9NR09 4857 aa9.59□□□□□ -0.87
XRCC1-202ENST00000543982 SMIM29Q86T20 159 aa9.59□□□□□ -0.87
XRCC1-202ENST00000543982 SPRR1BP22528 89 aa9.57□□□□□ -0.88
XRCC1-202ENST00000543982 SPRR4Q96PI1 79 aa9.57□□□□□ -0.88
XRCC1-202ENST00000543982 Q5VSD8 79 aa9.55□□□□□ -0.88
XRCC1-202ENST00000543982 SIGMAR1Q99720 223 aa9.54□□□□□ -0.88
XRCC1-202ENST00000543982 LINC00846Q9NV44 126 aa9.54□□□□□ -0.88
XRCC1-202ENST00000543982 F8WEM9 126 aa9.54□□□□□ -0.88
XRCC1-202ENST00000543982 FAM229AH3BQW9 127 aa9.52□□□□□ -0.89
XRCC1-202ENST00000543982 KRTAP1-4P0C5Y4 121 aa9.52□□□□□ -0.89
XRCC1-202ENST00000543982 LINC00483Q53H64 154 aa9.52□□□□□ -0.89
XRCC1-202ENST00000543982 ZNF706Q9Y5V0 76 aaPredicted RBP9.52□□□□□ -0.89
XRCC1-202ENST00000543982 IGLV8-61A0A075B6I0 122 aa9.5□□□□□ -0.89
XRCC1-202ENST00000543982 A0A0G2JQZ4 141 aa9.5□□□□□ -0.89
XRCC1-202ENST00000543982 MT-ATP8P03928 68 aa9.5□□□□□ -0.89
XRCC1-202ENST00000543982 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
XRCC1-202ENST00000543982 KRTAP4-5Q9BYR2 181 aa9.5□□□□□ -0.89
XRCC1-202ENST00000543982 LINC00643Q86TS7 51 aa9.49□□□□□ -0.89
XRCC1-202ENST00000543982 Q8N1X5 172 aa9.49□□□□□ -0.89
XRCC1-202ENST00000543982 PLA2G1BP04054 148 aaKnown RBP9.48□□□□□ -0.89
XRCC1-202ENST00000543982 SCGB1A1P11684 91 aa9.48□□□□□ -0.89
XRCC1-202ENST00000543982 PKHD1L1Q86WI1 4243 aa9.48□□□□□ -0.89
XRCC1-202ENST00000543982 A0A087X002 238 aa9.46□□□□□ -0.89
XRCC1-202ENST00000543982 UBL5Q9BZL1 73 aa9.46□□□□□ -0.9
XRCC1-202ENST00000543982 A0A1B0GW54 56 aa9.45□□□□□ -0.9
XRCC1-202ENST00000543982 A0A1W2PNM2 257 aa9.45□□□□□ -0.9
XRCC1-202ENST00000543982 IGFL1Q6UW32 110 aa9.45□□□□□ -0.9
XRCC1-202ENST00000543982 Q8NBF4 154 aa9.44□□□□□ -0.9
XRCC1-202ENST00000543982 HERC2O95714 4834 aa9.44□□□□□ -0.9
XRCC1-202ENST00000543982 IGLV9-49A0A0B4J1Y8 123 aa9.44□□□□□ -0.9
XRCC1-202ENST00000543982 KRTAP13-2Q52LG2 175 aa9.44□□□□□ -0.9
XRCC1-202ENST00000543982 Q6JHZ5 121 aa9.44□□□□□ -0.9
XRCC1-202ENST00000543982 LRP1Q07954 4544 aaKnown RBP9.43□□□□□ -0.9
XRCC1-202ENST00000543982 Q6ZVQ6 151 aa9.41□□□□□ -0.9
XRCC1-202ENST00000543982 CRYGAP11844 174 aa9.4□□□□□ -0.9
XRCC1-202ENST00000543982 MOBPQ13875 183 aa9.39□□□□□ -0.91
XRCC1-202ENST00000543982 TRBV7-7A0A0K0K1E9 115 aa9.39□□□□□ -0.91
XRCC1-202ENST00000543982 PRR26Q8N8Z3 221 aa9.38□□□□□ -0.91
XRCC1-202ENST00000543982 FLG2Q5D862 2391 aaPredicted RBP9.38□□□□□ -0.91
XRCC1-202ENST00000543982 C9orf153Q5TBE3 101 aa9.37□□□□□ -0.91
XRCC1-202ENST00000543982 IMUPQ9GZP8 106 aa9.37□□□□□ -0.91
XRCC1-202ENST00000543982 ATP5EP2Q5VTU8 51 aa9.37□□□□□ -0.91
XRCC1-202ENST00000543982 Q6Q795 121 aa9.37□□□□□ -0.91
XRCC1-202ENST00000543982 NREPQ16612 68 aa9.36□□□□□ -0.91
XRCC1-202ENST00000543982 FAM229BQ4G0N7 80 aa9.36□□□□□ -0.91
XRCC1-202ENST00000543982 IGKV3D-7A0A0C4DH55 119 aa9.35□□□□□ -0.91
XRCC1-202ENST00000543982 MYCBP2O75592 4640 aa9.35□□□□□ -0.91
XRCC1-202ENST00000543982 ABCA13Q86UQ4 5058 aa9.34□□□□□ -0.91
XRCC1-202ENST00000543982 FAT3Q8TDW7 4589 aa9.34□□□□□ -0.91
XRCC1-202ENST00000543982 CXCL6P80162 114 aa9.31□□□□□ -0.92
XRCC1-202ENST00000543982 A0A087WSZ3 146 aa9.3□□□□□ -0.92
XRCC1-202ENST00000543982 HRCT1Q6UXD1 115 aa9.3□□□□□ -0.92
XRCC1-202ENST00000543982 TNXBP22105 4242 aa9.28□□□□□ -0.92
XRCC1-202ENST00000543982 TYMSOSQ8TAI1 123 aa9.28□□□□□ -0.92
XRCC1-202ENST00000543982 SSBP3-AS1Q7Z2R9 100 aa9.27□□□□□ -0.93
XRCC1-202ENST00000543982 BPY2O14599 106 aa9.26□□□□□ -0.93
XRCC1-202ENST00000543982 HIST1H4AP62805 103 aaKnown RBP9.25□□□□□ -0.93
XRCC1-202ENST00000543982 KRTAP10-8P60410 259 aa9.24□□□□□ -0.93
XRCC1-202ENST00000543982 A0A087WVE0 104 aa9.22□□□□□ -0.93
XRCC1-202ENST00000543982 MT1HL1P0DM35 61 aa9.22□□□□□ -0.93
XRCC1-202ENST00000543982 FAM236AA0A1B0GUQ0 79 aa9.2□□□□□ -0.94
XRCC1-202ENST00000543982 FAM236BA0A1B0GV22 79 aa9.2□□□□□ -0.94
XRCC1-202ENST00000543982 CD164Q04900 197 aa9.2□□□□□ -0.94
XRCC1-202ENST00000543982 SS18L2Q9UHA2 77 aa9.19□□□□□ -0.94
XRCC1-202ENST00000543982 LINC00472Q9H8W2 130 aa9.17□□□□□ -0.94
XRCC1-202ENST00000543982 DSCR10P59022 87 aa9.17□□□□□ -0.94
XRCC1-202ENST00000543982 DEFB116Q30KQ4 102 aa9.17□□□□□ -0.94
XRCC1-202ENST00000543982 Q8N9L7 120 aa9.17□□□□□ -0.94
XRCC1-202ENST00000543982 LINC00304Q8N9R0 145 aa9.16□□□□□ -0.94
XRCC1-202ENST00000543982 IGKV4-1P06312 121 aa9.15□□□□□ -0.94
XRCC1-202ENST00000543982 J3KT08 172 aa9.12□□□□□ -0.95
XRCC1-202ENST00000543982 K7EQZ3 153 aa9.12□□□□□ -0.95
XRCC1-202ENST00000543982 Q96NJ1 140 aa9.12□□□□□ -0.95
XRCC1-202ENST00000543982 PCLOQ9Y6V0 5065 aa9.11□□□□□ -0.95
XRCC1-202ENST00000543982 DMBT1Q9UGM3 2413 aaPredicted RBP9.11□□□□□ -0.95
XRCC1-202ENST00000543982 OXTP01178 125 aa9.1□□□□□ -0.95
XRCC1-202ENST00000543982 C4orf48Q5BLP8 95 aa9.1□□□□□ -0.95
XRCC1-202ENST00000543982 ANAPC13Q9BS18 74 aa9.1□□□□□ -0.95
XRCC1-202ENST00000543982 KRTAP29-1A8MX34 341 aaPredicted RBP9.09□□□□□ -0.95
XRCC1-202ENST00000543982 SPINK1P00995 79 aa9.09□□□□□ -0.95
XRCC1-202ENST00000543982 ATOX1O00244 68 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms