RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 RPS28P62857 69 aaKnown RBP11.08□□□□□ -0.64
PTPN6-222ENST00000543744 DPH3Q96FX2 82 aa11.08□□□□□ -0.64
PTPN6-222ENST00000543744 SNURFQ9Y675 71 aa11.07□□□□□ -0.64
PTPN6-222ENST00000543744 PANO1I0J062 215 aa11.06□□□□□ -0.64
PTPN6-222ENST00000543744 H7BZZ5 65 aa11.04□□□□□ -0.64
PTPN6-222ENST00000543744 DSCR10P59022 87 aa11.04□□□□□ -0.64
PTPN6-222ENST00000543744 SPRR1BP22528 89 aa11.04□□□□□ -0.64
PTPN6-222ENST00000543744 OCR1Q9BZK8 76 aa11.04□□□□□ -0.64
PTPN6-222ENST00000543744 A0A087WTM6 91 aa11.01□□□□□ -0.65
PTPN6-222ENST00000543744 A0A087WSZ3 146 aa11□□□□□ -0.65
PTPN6-222ENST00000543744 FAM236DA0A1B0GTK5 79 aa11□□□□□ -0.65
PTPN6-222ENST00000543744 K7EQZ3 153 aa11□□□□□ -0.65
PTPN6-222ENST00000543744 FAM236CP0DP71 79 aa11□□□□□ -0.65
PTPN6-222ENST00000543744 TMEM254Q8TBM7 123 aa11□□□□□ -0.65
PTPN6-222ENST00000543744 SPACA4Q8TDM5 124 aa11□□□□□ -0.65
PTPN6-222ENST00000543744 STARD9Q9P2P6 4700 aa11□□□□□ -0.65
PTPN6-222ENST00000543744 PRKDCP78527 4128 aaKnown RBP10.99□□□□□ -0.65
PTPN6-222ENST00000543744 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.99□□□□□ -0.65
PTPN6-222ENST00000543744 NDUFC1O43677 76 aa10.98□□□□□ -0.65
PTPN6-222ENST00000543744 SRRM2Q9UQ35 2752 aaKnown RBP10.98□□□□□ -0.65
PTPN6-222ENST00000543744 KRTAP13-1Q8IUC0 172 aa10.97□□□□□ -0.65
PTPN6-222ENST00000543744 VPS13DQ5THJ4 4388 aa10.97□□□□□ -0.65
PTPN6-222ENST00000543744 MEGF8Q7Z7M0 2845 aa10.95□□□□□ -0.66
PTPN6-222ENST00000543744 DEFB116Q30KQ4 102 aa10.95□□□□□ -0.66
PTPN6-222ENST00000543744 FAM30AQ9NZY2 134 aa10.94□□□□□ -0.66
PTPN6-222ENST00000543744 Q6ZR54 194 aa10.93□□□□□ -0.66
PTPN6-222ENST00000543744 RTL8CO15255 209 aa10.92□□□□□ -0.66
PTPN6-222ENST00000543744 A0A0U1RQV1 116 aa10.92□□□□□ -0.66
PTPN6-222ENST00000543744 HCG22E2RYF7 251 aa10.92□□□□□ -0.66
PTPN6-222ENST00000543744 OXTP01178 125 aa10.91□□□□□ -0.66
PTPN6-222ENST00000543744 SERP1Q9Y6X1 66 aa10.87□□□□□ -0.67
PTPN6-222ENST00000543744 HECTD4Q9Y4D8 3996 aa10.86□□□□□ -0.67
PTPN6-222ENST00000543744 LCE6AA0A183 80 aa10.85□□□□□ -0.67
PTPN6-222ENST00000543744 RPL37AP61513 92 aaKnown RBP10.85□□□□□ -0.67
PTPN6-222ENST00000543744 ATP5EP56381 51 aaPredicted RBP10.84□□□□□ -0.67
PTPN6-222ENST00000543744 C1orf134Q5TEV5 83 aa10.84□□□□□ -0.67
PTPN6-222ENST00000543744 PLAC8Q9NZF1 115 aa10.84□□□□□ -0.67
PTPN6-222ENST00000543744 LINC00472Q9H8W2 130 aa10.83□□□□□ -0.68
PTPN6-222ENST00000543744 PSORS1C2Q9UIG4 136 aa10.83□□□□□ -0.68
PTPN6-222ENST00000543744 IGLV5-52A0A0A0MRZ9 124 aa10.82□□□□□ -0.68
PTPN6-222ENST00000543744 IGLV9-49A0A0B4J1Y8 123 aa10.82□□□□□ -0.68
PTPN6-222ENST00000543744 WFDC13Q8IUB5 93 aa10.82□□□□□ -0.68
PTPN6-222ENST00000543744 KMT2AQ03164 3969 aa10.82□□□□□ -0.68
PTPN6-222ENST00000543744 LINC00483Q53H64 154 aa10.81□□□□□ -0.68
PTPN6-222ENST00000543744 ZNF706Q9Y5V0 76 aaPredicted RBP10.81□□□□□ -0.68
PTPN6-222ENST00000543744 DNAH2Q9P225 4427 aa10.81□□□□□ -0.68
PTPN6-222ENST00000543744 PRR15Q8IV56 129 aa10.8□□□□□ -0.68
PTPN6-222ENST00000543744 A8MWP4 228 aa10.79□□□□□ -0.68
PTPN6-222ENST00000543744 C5orf47Q569G3 176 aa10.79□□□□□ -0.68
PTPN6-222ENST00000543744 LY6G6CO95867 125 aa10.78□□□□□ -0.68
PTPN6-222ENST00000543744 DNHD1Q96M86 4753 aa10.78□□□□□ -0.68
PTPN6-222ENST00000543744 KRTAP29-1A8MX34 341 aaPredicted RBP10.76□□□□□ -0.69
PTPN6-222ENST00000543744 ZNF861PO60384 105 aa10.76□□□□□ -0.69
PTPN6-222ENST00000543744 CASC2Q6XLA1 102 aa10.75□□□□□ -0.69
PTPN6-222ENST00000543744 DNAH17Q9UFH2 4485 aa10.74□□□□□ -0.69
PTPN6-222ENST00000543744 TGP01266 2768 aa10.74□□□□□ -0.69
PTPN6-222ENST00000543744 ZCCHC13Q8WW36 166 aaKnown RBP10.74□□□□□ -0.69
PTPN6-222ENST00000543744 WWC2-AS2Q96NR7 200 aa10.73□□□□□ -0.69
PTPN6-222ENST00000543744 FBN3Q75N90 2809 aa10.73□□□□□ -0.69
PTPN6-222ENST00000543744 SVIPQ8NHG7 77 aa10.72□□□□□ -0.69
PTPN6-222ENST00000543744 Q5XG85 94 aa10.71□□□□□ -0.69
PTPN6-222ENST00000543744 NDUFB1O75438 58 aa10.7□□□□□ -0.7
PTPN6-222ENST00000543744 HRCT1Q6UXD1 115 aa10.7□□□□□ -0.7
PTPN6-222ENST00000543744 MOBPQ13875 183 aa10.7□□□□□ -0.7
PTPN6-222ENST00000543744 ANAPC11Q9NYG5 84 aa10.69□□□□□ -0.7
PTPN6-222ENST00000543744 MP68P56378 58 aa10.68□□□□□ -0.7
PTPN6-222ENST00000543744 Q96NJ1 140 aa10.68□□□□□ -0.7
PTPN6-222ENST00000543744 SMIM26A0A096LP01 95 aa10.67□□□□□ -0.7
PTPN6-222ENST00000543744 IGLV7-43P04211 117 aa10.66□□□□□ -0.7
PTPN6-222ENST00000543744 C4orf26Q17RF5 130 aa10.66□□□□□ -0.7
PTPN6-222ENST00000543744 MMP24-AS1A0A0U1RRL7 71 aa10.65□□□□□ -0.71
PTPN6-222ENST00000543744 DNAH8Q96JB1 4490 aa10.64□□□□□ -0.71
PTPN6-222ENST00000543744 FRAS1Q86XX4 4008 aa10.62□□□□□ -0.71
PTPN6-222ENST00000543744 hDV103S1A0JD37 113 aa10.62□□□□□ -0.71
PTPN6-222ENST00000543744 LINC00208Q96KT6 92 aa10.62□□□□□ -0.71
PTPN6-222ENST00000543744 H0Y9P7 68 aa10.61□□□□□ -0.71
PTPN6-222ENST00000543744 KRTAP10-2P60368 255 aa10.61□□□□□ -0.71
PTPN6-222ENST00000543744 FP248Q71RG6 208 aaPredicted RBP10.6□□□□□ -0.71
PTPN6-222ENST00000543744 DNAH6Q9C0G6 4158 aa10.59□□□□□ -0.71
PTPN6-222ENST00000543744 CIRBP-AS1Q8TBR5 109 aa10.59□□□□□ -0.71
PTPN6-222ENST00000543744 TRAV22A0A0B4J277 110 aa10.58□□□□□ -0.72
PTPN6-222ENST00000543744 H3BPC8 53 aa10.58□□□□□ -0.72
PTPN6-222ENST00000543744 CDK2AP2O75956 126 aa10.57□□□□□ -0.72
PTPN6-222ENST00000543744 C8orf17Q9NRJ1 99 aa10.56□□□□□ -0.72
PTPN6-222ENST00000543744 A0A1B0GVX0 72 aa10.55□□□□□ -0.72
PTPN6-222ENST00000543744 ASB16-AS1Q495Z4 193 aa10.55□□□□□ -0.72
PTPN6-222ENST00000543744 FAM229BQ4G0N7 80 aa10.55□□□□□ -0.72
PTPN6-222ENST00000543744 IGHV6-1A0A0B4J1U7 121 aa10.55□□□□□ -0.72
PTPN6-222ENST00000543744 C1orf64Q8NEQ6 169 aa10.52□□□□□ -0.73
PTPN6-222ENST00000543744 CYP4F30PQ9H0H9 118 aa10.51□□□□□ -0.73
PTPN6-222ENST00000543744 PRR4Q16378 134 aa10.51□□□□□ -0.73
PTPN6-222ENST00000543744 TP53AIP1Q9HCN2 124 aa10.51□□□□□ -0.73
PTPN6-222ENST00000543744 DNAH5Q8TE73 4624 aa10.5□□□□□ -0.73
PTPN6-222ENST00000543744 SSBP3-AS1Q7Z2R9 100 aa10.49□□□□□ -0.73
PTPN6-222ENST00000543744 KRTAP10-1P60331 282 aa10.48□□□□□ -0.73
PTPN6-222ENST00000543744 Q6ZSA8 131 aa10.48□□□□□ -0.73
PTPN6-222ENST00000543744 DNAH11Q96DT5 4516 aa10.48□□□□□ -0.73
PTPN6-222ENST00000543744 ALMS1Q8TCU4 4167 aa10.48□□□□□ -0.73
PTPN6-222ENST00000543744 CD164Q04900 197 aa10.48□□□□□ -0.73
PTPN6-222ENST00000543744 SPANXA2-OT1Q8N9U9 137 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms