RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 Q6JHZ5 121 aa9.1□□□□□ -0.95
RAP1B-229ENST00000543393 TTTY13Q9BZ97 58 aa9.09□□□□□ -0.95
RAP1B-229ENST00000543393 TRGC2P03986 189 aa9.08□□□□□ -0.96
RAP1B-229ENST00000543393 KRTAP6-3Q3LI67 103 aa9.08□□□□□ -0.96
RAP1B-229ENST00000543393 SVBPQ8N300 66 aa9.08□□□□□ -0.96
RAP1B-229ENST00000543393 LST1O00453 97 aa9.06□□□□□ -0.96
RAP1B-229ENST00000543393 NDUFA5Q16718 116 aa9.04□□□□□ -0.96
RAP1B-229ENST00000543393 SLC7A5P1Q8MH63 180 aa9.03□□□□□ -0.96
RAP1B-229ENST00000543393 SMIM11BQ8TCY0 68 aa9.03□□□□□ -0.96
RAP1B-229ENST00000543393 TRAV13-2A0A0B4J235 113 aa9.02□□□□□ -0.97
RAP1B-229ENST00000543393 OCIAD2Q56VL3 154 aa9.02□□□□□ -0.97
RAP1B-229ENST00000543393 KRTAP16-1A8MUX0 517 aa9□□□□□ -0.97
RAP1B-229ENST00000543393 SYS1-DBNDD2H3BUS1 97 aa9□□□□□ -0.97
RAP1B-229ENST00000543393 Q6ZQY7 126 aa9□□□□□ -0.97
RAP1B-229ENST00000543393 SCGB1D4Q6XE38 83 aa8.99□□□□□ -0.97
RAP1B-229ENST00000543393 MPLKIPQ8TAP9 179 aa8.99□□□□□ -0.97
RAP1B-229ENST00000543393 COPS9Q8WXC6 57 aa8.99□□□□□ -0.97
RAP1B-229ENST00000543393 RBM12B-AS1Q9P1G2 102 aa8.99□□□□□ -0.97
RAP1B-229ENST00000543393 IFITM1P13164 125 aa8.98□□□□□ -0.97
RAP1B-229ENST00000543393 LINC00575Q6W349 94 aa8.98□□□□□ -0.97
RAP1B-229ENST00000543393 HRES1P13985 223 aa8.96□□□□□ -0.98
RAP1B-229ENST00000543393 MUSTN1Q8IVN3 82 aa8.96□□□□□ -0.98
RAP1B-229ENST00000543393 hADV29S1A0JD25 119 aa8.95□□□□□ -0.98
RAP1B-229ENST00000543393 LINC01545Q5VT33 79 aa8.95□□□□□ -0.98
RAP1B-229ENST00000543393 VAMP3Q15836 100 aa8.94□□□□□ -0.98
RAP1B-229ENST00000543393 DSCR10P59022 87 aa8.93□□□□□ -0.98
RAP1B-229ENST00000543393 Q6ZVH6 145 aa8.93□□□□□ -0.98
RAP1B-229ENST00000543393 SS18L2Q9UHA2 77 aa8.92□□□□□ -0.98
RAP1B-229ENST00000543393 H3BUT2 72 aa8.91□□□□□ -0.98
RAP1B-229ENST00000543393 PET117Q6UWS5 81 aa8.89□□□□□ -0.99
RAP1B-229ENST00000543393 NEBP20929 6669 aa8.87□□□□□ -0.99
RAP1B-229ENST00000543393 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
RAP1B-229ENST00000543393 SNHG12Q9BXW3 62 aa8.87□□□□□ -0.99
RAP1B-229ENST00000543393 SCGB1D1O95968 90 aa8.86□□□□□ -0.99
RAP1B-229ENST00000543393 ANKRD39Q53RE8 183 aa8.86□□□□□ -0.99
RAP1B-229ENST00000543393 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.86□□□□□ -0.99
RAP1B-229ENST00000543393 PPDPFLQ8WWR9 84 aa8.85□□□□□ -0.99
RAP1B-229ENST00000543393 TEN1Q86WV5 123 aa8.83□□□□□ -1
RAP1B-229ENST00000543393 A0A087WSZ3 146 aa8.82□□□□□ -1
RAP1B-229ENST00000543393 LINC00313P59037 77 aa8.82□□□□□ -1
RAP1B-229ENST00000543393 C3orf79P0CE67 100 aa8.8□□□□□ -1
RAP1B-229ENST00000543393 MTURNQ8N3F0 131 aa8.8□□□□□ -1
RAP1B-229ENST00000543393 COLCA2A8K830 154 aa8.78□□□□□ -1
RAP1B-229ENST00000543393 SIGMAR1Q99720 223 aa8.78□□□□□ -1
RAP1B-229ENST00000543393 Q8N9P0 234 aaPredicted RBP8.77□□□□□ -1.01
RAP1B-229ENST00000543393 A8MWP4 228 aa8.76□□□□□ -1.01
RAP1B-229ENST00000543393 MUC12Q9UKN1 5478 aa8.74□□□□□ -1.01
RAP1B-229ENST00000543393 KRTDAPP60985 99 aa8.73□□□□□ -1.01
RAP1B-229ENST00000543393 HIST1H2BKO60814 126 aa8.72□□□□□ -1.01
RAP1B-229ENST00000543393 HIST1H2BJP06899 126 aa8.72□□□□□ -1.01
RAP1B-229ENST00000543393 HIST1H2BOP23527 126 aa8.72□□□□□ -1.01
RAP1B-229ENST00000543393 HIST1H2BBP33778 126 aa8.72□□□□□ -1.01
RAP1B-229ENST00000543393 HIST1H2BDP58876 126 aa8.72□□□□□ -1.01
RAP1B-229ENST00000543393 HIST1H2BCP62807 126 aa8.72□□□□□ -1.01
RAP1B-229ENST00000543393 HIST2H2BEQ16778 126 aa8.72□□□□□ -1.01
RAP1B-229ENST00000543393 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.72□□□□□ -1.01
RAP1B-229ENST00000543393 BVES-AS1Q5T3Y7 98 aa8.72□□□□□ -1.01
RAP1B-229ENST00000543393 ATOH7Q8N100 152 aa8.72□□□□□ -1.01
RAP1B-229ENST00000543393 HIST1H2BHQ93079 126 aa8.72□□□□□ -1.01
RAP1B-229ENST00000543393 HIST1H2BNQ99877 126 aa8.72□□□□□ -1.01
RAP1B-229ENST00000543393 HIST1H2BMQ99879 126 aa8.72□□□□□ -1.01
RAP1B-229ENST00000543393 KRTAP20-1Q3LI63 56 aa8.71□□□□□ -1.02
RAP1B-229ENST00000543393 IGKV4-1P06312 121 aa8.7□□□□□ -1.02
RAP1B-229ENST00000543393 NDUFV3P56181 108 aaKnown RBP8.7□□□□□ -1.02
RAP1B-229ENST00000543393 C12orf57Q99622 126 aa8.69□□□□□ -1.02
RAP1B-229ENST00000543393 A0A1W2PNM2 257 aa8.64□□□□□ -1.03
RAP1B-229ENST00000543393 H3BMG7 143 aa8.63□□□□□ -1.03
RAP1B-229ENST00000543393 SPINK7P58062 85 aa8.63□□□□□ -1.03
RAP1B-229ENST00000543393 IGHV6-1A0A0B4J1U7 121 aa8.61□□□□□ -1.03
RAP1B-229ENST00000543393 DEFB116Q30KQ4 102 aa8.61□□□□□ -1.03
RAP1B-229ENST00000543393 SNCGO76070 127 aa8.58□□□□□ -1.04
RAP1B-229ENST00000543393 ZCCHC13Q8WW36 166 aaKnown RBP8.57□□□□□ -1.04
RAP1B-229ENST00000543393 FAM218AQ96MZ4 157 aa8.57□□□□□ -1.04
RAP1B-229ENST00000543393 SNRPEP62304 92 aaKnown RBP8.56□□□□□ -1.04
RAP1B-229ENST00000543393 LINC00472Q9H8W2 130 aa8.55□□□□□ -1.04
RAP1B-229ENST00000543393 FABP2P12104 132 aa8.54□□□□□ -1.04
RAP1B-229ENST00000543393 COA6Q5JTJ3 125 aaKnown RBP8.54□□□□□ -1.04
RAP1B-229ENST00000543393 WFDC13Q8IUB5 93 aa8.54□□□□□ -1.04
RAP1B-229ENST00000543393 TRBV7-4A0A0J9YYF1 115 aa8.52□□□□□ -1.05
RAP1B-229ENST00000543393 H0YGX0 51 aa8.52□□□□□ -1.05
RAP1B-229ENST00000543393 C8orf87E5RJ46 101 aa8.5□□□□□ -1.05
RAP1B-229ENST00000543393 A6NN06 94 aa8.49□□□□□ -1.05
RAP1B-229ENST00000543393 GHRHP01286 108 aa8.49□□□□□ -1.05
RAP1B-229ENST00000543393 ANKRD29Q8N6D5 301 aa8.49□□□□□ -1.05
RAP1B-229ENST00000543393 HIST1H4GQ99525 98 aa8.49□□□□□ -1.05
RAP1B-229ENST00000543393 RAB37Q96AX2 223 aa8.48□□□□□ -1.05
RAP1B-229ENST00000543393 A0A1B0GVX0 72 aa8.47□□□□□ -1.05
RAP1B-229ENST00000543393 A0A1B0GV72 72 aa8.45□□□□□ -1.06
RAP1B-229ENST00000543393 HSBP1L1C9JCN9 74 aa8.43□□□□□ -1.06
RAP1B-229ENST00000543393 A0A1B0GX51 115 aa8.42□□□□□ -1.06
RAP1B-229ENST00000543393 TRACP01848 142 aa8.42□□□□□ -1.06
RAP1B-229ENST00000543393 KRTAP5-9P26371 169 aa8.42□□□□□ -1.06
RAP1B-229ENST00000543393 CCKP06307 115 aa8.41□□□□□ -1.06
RAP1B-229ENST00000543393 MDN1Q9NU22 5596 aa8.41□□□□□ -1.06
RAP1B-229ENST00000543393 KMT2DO14686 5537 aa8.38□□□□□ -1.07
RAP1B-229ENST00000543393 H1FX-AS1Q4G0G2 97 aa8.38□□□□□ -1.07
RAP1B-229ENST00000543393 A0A0B4J2C4 111 aa8.36□□□□□ -1.07
RAP1B-229ENST00000543393 MT1BP07438 61 aa8.35□□□□□ -1.07
RAP1B-229ENST00000543393 LYRM7Q5U5X0 104 aa8.35□□□□□ -1.07
RAP1B-229ENST00000543393 ORMDL1Q9P0S3 153 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms