RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	TMEM256-PLSCR3	K7ERE1	68 aa		4.12	□□□□□ -1.75
CIT-213	ENST00000543324	NDUFC1	O43677	76 aa		4.12	□□□□□ -1.75
CIT-213	ENST00000543324	SCX	Q7RTU7	201 aa		4.12	□□□□□ -1.75
CIT-213	ENST00000543324	KLK12	Q9UKR0	248 aa		4.12	□□□□□ -1.75
CIT-213	ENST00000543324	NEB	P20929	6669 aa		4.11	□□□□□ -1.75
CIT-213	ENST00000543324	LOC110117498	A0A087WWA1	95 aa		4.11	□□□□□ -1.75
CIT-213	ENST00000543324		H3BQ85	93 aa		4.11	□□□□□ -1.75
CIT-213	ENST00000543324		H7BZZ5	65 aa		4.11	□□□□□ -1.75
CIT-213	ENST00000543324	NCR3	O14931	201 aa		4.11	□□□□□ -1.75
CIT-213	ENST00000543324	RMI2	Q96E14	147 aa		4.11	□□□□□ -1.75
CIT-213	ENST00000543324	UBL5	Q9BZL1	73 aa		4.11	□□□□□ -1.75
CIT-213	ENST00000543324	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.11	□□□□□ -1.75
CIT-213	ENST00000543324	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.1	□□□□□ -1.75
CIT-213	ENST00000543324	IGKV2D-24	A0A075B6R9	120 aa		4.1	□□□□□ -1.75
CIT-213	ENST00000543324		A0A087WZ39	114 aa		4.1	□□□□□ -1.75
CIT-213	ENST00000543324	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.09	□□□□□ -1.75
CIT-213	ENST00000543324		A0A1B0GUV1	79 aa		4.09	□□□□□ -1.75
CIT-213	ENST00000543324		F8WDY8	70 aa		4.09	□□□□□ -1.75
CIT-213	ENST00000543324	UBE2L6	O14933	153 aa		4.09	□□□□□ -1.75
CIT-213	ENST00000543324	PDE6G	P18545	87 aa		4.09	□□□□□ -1.75
CIT-213	ENST00000543324	LINC00158	P58513	81 aa		4.09	□□□□□ -1.75
CIT-213	ENST00000543324		Q6ZRU5	148 aa		4.09	□□□□□ -1.75
CIT-213	ENST00000543324	C20orf197	Q8N268	126 aa		4.09	□□□□□ -1.75
CIT-213	ENST00000543324	CIRBP-AS1	Q8TBR5	109 aa		4.09	□□□□□ -1.75
CIT-213	ENST00000543324	C1orf43	Q9BWL3	253 aa		4.09	□□□□□ -1.75
CIT-213	ENST00000543324	TRAV23DV6	A0A075B6W5	121 aa		4.08	□□□□□ -1.76
CIT-213	ENST00000543324	ERC2-IT1	O76042	136 aa		4.08	□□□□□ -1.76
CIT-213	ENST00000543324	CXCL6	P80162	114 aa		4.08	□□□□□ -1.76
CIT-213	ENST00000543324	C14orf177	Q52M58	125 aa		4.08	□□□□□ -1.76
CIT-213	ENST00000543324		Q6ZQT0	140 aa		4.08	□□□□□ -1.76
CIT-213	ENST00000543324	FAM19A1	Q7Z5A9	133 aa		4.08	□□□□□ -1.76
CIT-213	ENST00000543324		Q8IZM0	81 aa		4.08	□□□□□ -1.76
CIT-213	ENST00000543324	IGLV4-60	A0A075B6I1	120 aa		4.07	□□□□□ -1.76
CIT-213	ENST00000543324	ZNF561-AS1	K7EIQ3	104 aa		4.07	□□□□□ -1.76
CIT-213	ENST00000543324	ANG	P03950	147 aa	Known RBP	4.07	□□□□□ -1.76
CIT-213	ENST00000543324	CNBP	P62633	177 aa	Known RBP	4.07	□□□□□ -1.76
CIT-213	ENST00000543324	COX17	Q14061	63 aa		4.07	□□□□□ -1.76
CIT-213	ENST00000543324	LINC00269	Q8N2A0	174 aa		4.07	□□□□□ -1.76
CIT-213	ENST00000543324	C9orf163	Q8N9P6	203 aa		4.07	□□□□□ -1.76
CIT-213	ENST00000543324	SLPI	P03973	132 aa		4.06	□□□□□ -1.76
CIT-213	ENST00000543324	REG3A	Q06141	175 aa		4.06	□□□□□ -1.76
CIT-213	ENST00000543324	FP248	Q71RG6	208 aa	Predicted RBP	4.06	□□□□□ -1.76
CIT-213	ENST00000543324	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.06	□□□□□ -1.76
CIT-213	ENST00000543324	MUC17	Q685J3	4493 aa		4.05	□□□□□ -1.76
CIT-213	ENST00000543324	LINC01547	P58512	204 aa	Predicted RBP	4.05	□□□□□ -1.76
CIT-213	ENST00000543324	RBM3	P98179	157 aa	Known RBP	4.05	□□□□□ -1.76
CIT-213	ENST00000543324	CLPSL2	Q6UWE3	100 aa		4.05	□□□□□ -1.76
CIT-213	ENST00000543324	C15orf56	Q8N910	161 aa		4.05	□□□□□ -1.76
CIT-213	ENST00000543324	TOMM7	Q9P0U1	55 aa		4.05	□□□□□ -1.76
CIT-213	ENST00000543324	TRBV7-4	A0A0J9YYF1	115 aa		4.04	□□□□□ -1.76
CIT-213	ENST00000543324	LINC00575	Q6W349	94 aa		4.04	□□□□□ -1.76
CIT-213	ENST00000543324		Q6ZVQ6	151 aa		4.04	□□□□□ -1.76
CIT-213	ENST00000543324	IGLV10-54	A0A075B6I4	117 aa		4.03	□□□□□ -1.76
CIT-213	ENST00000543324	TRBV7-6	A0A0J9YX20	115 aa		4.03	□□□□□ -1.76
CIT-213	ENST00000543324	LINC00959	A0A1B0GUT2	108 aa		4.03	□□□□□ -1.76
CIT-213	ENST00000543324		F8WEM9	126 aa		4.03	□□□□□ -1.76
CIT-213	ENST00000543324	RPL37A	P61513	92 aa	Known RBP	4.03	□□□□□ -1.76
CIT-213	ENST00000543324	SPACA4	Q8TDM5	124 aa		4.03	□□□□□ -1.76
CIT-213	ENST00000543324	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.02	□□□□□ -1.77
CIT-213	ENST00000543324	KRTAP20-1	Q3LI63	56 aa		4.02	□□□□□ -1.77
CIT-213	ENST00000543324	C6orf226	Q5I0X4	101 aa		4.02	□□□□□ -1.77
CIT-213	ENST00000543324	KRTAP4-7	Q9BYR0	210 aa		4.02	□□□□□ -1.77
CIT-213	ENST00000543324	KIAA0087	Q14695	138 aa		4.01	□□□□□ -1.77
CIT-213	ENST00000543324	PLAC8	Q9NZF1	115 aa		4.01	□□□□□ -1.77
CIT-213	ENST00000543324	NREP	Q16612	68 aa		4	□□□□□ -1.77
CIT-213	ENST00000543324	C6orf99	Q4VX62	202 aa		4	□□□□□ -1.77
CIT-213	ENST00000543324	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4	□□□□□ -1.77
CIT-213	ENST00000543324	LAMTOR3	Q9UHA4	124 aa		4	□□□□□ -1.77
CIT-213	ENST00000543324	IGLV6-57	P01721	117 aa		3.99	□□□□□ -1.77
CIT-213	ENST00000543324	CHTF8	P0CG12	524 aa		3.99	□□□□□ -1.77
CIT-213	ENST00000543324	C1orf195	Q5TG92	126 aa		3.99	□□□□□ -1.77
CIT-213	ENST00000543324	TMEM254	Q8TBM7	123 aa		3.99	□□□□□ -1.77
CIT-213	ENST00000543324	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	3.99	□□□□□ -1.77
CIT-213	ENST00000543324	SNURF	Q9Y675	71 aa		3.99	□□□□□ -1.77
CIT-213	ENST00000543324	LCE1D	Q5T752	114 aa		3.98	□□□□□ -1.77
CIT-213	ENST00000543324	CD164L2	Q6UWJ8	174 aa		3.98	□□□□□ -1.77
CIT-213	ENST00000543324	OCR1	Q9BZK8	76 aa		3.98	□□□□□ -1.77
CIT-213	ENST00000543324		V9GYY9	64 aa		3.98	□□□□□ -1.77
CIT-213	ENST00000543324		A0A096LNI7	61 aa		3.97	□□□□□ -1.77
CIT-213	ENST00000543324	IGKV3OR2-268	A0A0C4DH90	116 aa		3.97	□□□□□ -1.77
CIT-213	ENST00000543324		A0A1B0GW54	56 aa		3.97	□□□□□ -1.77
CIT-213	ENST00000543324	PRY	O14603	147 aa		3.97	□□□□□ -1.77
CIT-213	ENST00000543324	COX7B	P24311	80 aa		3.97	□□□□□ -1.77
CIT-213	ENST00000543324	KRTAP10-8	P60410	259 aa		3.97	□□□□□ -1.77
CIT-213	ENST00000543324	BPY2	O14599	106 aa		3.96	□□□□□ -1.78
CIT-213	ENST00000543324	PRR3	P79522	188 aa	Known RBP	3.96	□□□□□ -1.78
CIT-213	ENST00000543324	HIGD2B	Q4VC39	106 aa		3.96	□□□□□ -1.78
CIT-213	ENST00000543324	PRR15	Q8IV56	129 aa		3.96	□□□□□ -1.78
CIT-213	ENST00000543324	LINC00474	Q9P2X8	69 aa		3.96	□□□□□ -1.78
CIT-213	ENST00000543324	IGKV4-1	P06312	121 aa		3.95	□□□□□ -1.78
CIT-213	ENST00000543324		Q6ZQY7	126 aa		3.95	□□□□□ -1.78
CIT-213	ENST00000543324		Q8NDZ9	215 aa		3.95	□□□□□ -1.78
CIT-213	ENST00000543324	BRK1	Q8WUW1	75 aa		3.95	□□□□□ -1.78
CIT-213	ENST00000543324	DIRC1	Q969H9	104 aa		3.95	□□□□□ -1.78
CIT-213	ENST00000543324	PKIG	Q9Y2B9	76 aa		3.95	□□□□□ -1.78
CIT-213	ENST00000543324	ELOF1	P60002	83 aa	Known RBP	3.94	□□□□□ -1.78
CIT-213	ENST00000543324	SEC61G	P60059	68 aa		3.94	□□□□□ -1.78
CIT-213	ENST00000543324		Q1T7F1	81 aa		3.94	□□□□□ -1.78
CIT-213	ENST00000543324	FAM229B	Q4G0N7	80 aa		3.94	□□□□□ -1.78
CIT-213	ENST00000543324	hDV103S1	A0JD37	113 aa		3.93	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms