RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 A0A0J9YWU9 116 aa7.36□□□□□ -1.23
CDH4-201ENST00000543233 ELOF1P60002 83 aaKnown RBP7.36□□□□□ -1.23
CDH4-201ENST00000543233 COA5Q86WW8 74 aa7.36□□□□□ -1.23
CDH4-201ENST00000543233 KIAA0087Q14695 138 aa7.36□□□□□ -1.23
CDH4-201ENST00000543233 KRTAP24-1Q3LI83 254 aa7.36□□□□□ -1.23
CDH4-201ENST00000543233 SPINK7P58062 85 aa7.36□□□□□ -1.23
CDH4-201ENST00000543233 CSMD3Q7Z407 3707 aa7.35□□□□□ -1.23
CDH4-201ENST00000543233 KPRPQ5T749 579 aaPredicted RBP7.35□□□□□ -1.23
CDH4-201ENST00000543233 LELP1Q5T871 98 aa7.34□□□□□ -1.23
CDH4-201ENST00000543233 STAB2Q8WWQ8 2551 aa7.34□□□□□ -1.23
CDH4-201ENST00000543233 H0Y9P7 68 aa7.33□□□□□ -1.24
CDH4-201ENST00000543233 Q9BRP9 147 aa7.33□□□□□ -1.24
CDH4-201ENST00000543233 DSCR10P59022 87 aa7.31□□□□□ -1.24
CDH4-201ENST00000543233 RETNLBQ9BQ08 111 aa7.3□□□□□ -1.24
CDH4-201ENST00000543233 ZNF706Q9Y5V0 76 aaPredicted RBP7.3□□□□□ -1.24
CDH4-201ENST00000543233 DNHD1Q96M86 4753 aa7.3□□□□□ -1.24
CDH4-201ENST00000543233 IGKV2D-24A0A075B6R9 120 aa7.29□□□□□ -1.24
CDH4-201ENST00000543233 DEFB131BA0A096LNP1 70 aa7.28□□□□□ -1.24
CDH4-201ENST00000543233 C1orf137Q5JT78 98 aa7.28□□□□□ -1.24
CDH4-201ENST00000543233 SPANXA2-OT1Q8N9U9 137 aa7.28□□□□□ -1.24
CDH4-201ENST00000543233 KCNQ1DNQ9H478 68 aa7.28□□□□□ -1.24
CDH4-201ENST00000543233 A0A1W2PNM2 257 aa7.27□□□□□ -1.24
CDH4-201ENST00000543233 PCOTHQ58A44 107 aa7.27□□□□□ -1.24
CDH4-201ENST00000543233 CAMK2N2Q96S95 79 aa7.27□□□□□ -1.24
CDH4-201ENST00000543233 TENM2Q9NT68 2774 aa7.27□□□□□ -1.25
CDH4-201ENST00000543233 C6orf48Q9UBA6 75 aa7.27□□□□□ -1.25
CDH4-201ENST00000543233 PRR34Q9NV39 138 aa7.25□□□□□ -1.25
CDH4-201ENST00000543233 LINC00528Q8N1L1 170 aa7.25□□□□□ -1.25
CDH4-201ENST00000543233 LINC01558Q9Y6Z2 57 aa7.23□□□□□ -1.25
CDH4-201ENST00000543233 Q8N377 158 aa7.23□□□□□ -1.25
CDH4-201ENST00000543233 LINC00476Q8WZB0 136 aa7.23□□□□□ -1.25
CDH4-201ENST00000543233 Q8NBF4 154 aa7.22□□□□□ -1.25
CDH4-201ENST00000543233 RPL37AP61513 92 aaKnown RBP7.21□□□□□ -1.25
CDH4-201ENST00000543233 A0A0G2JQZ4 141 aa7.2□□□□□ -1.26
CDH4-201ENST00000543233 A0A1W2PNN7 141 aa7.2□□□□□ -1.26
CDH4-201ENST00000543233 C7orf33Q8WU49 177 aa7.2□□□□□ -1.26
CDH4-201ENST00000543233 CMYA5Q8N3K9 4069 aa7.19□□□□□ -1.26
CDH4-201ENST00000543233 C15orf56Q8N910 161 aa7.19□□□□□ -1.26
CDH4-201ENST00000543233 IGLV5-48A0A075B6I7 105 aa7.18□□□□□ -1.26
CDH4-201ENST00000543233 PLA2G1BP04054 148 aaKnown RBP7.18□□□□□ -1.26
CDH4-201ENST00000543233 EGFEM1PQ0D2K5 195 aa7.18□□□□□ -1.26
CDH4-201ENST00000543233 CASC10Q5T4H9 136 aa7.18□□□□□ -1.26
CDH4-201ENST00000543233 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
CDH4-201ENST00000543233 KRTAP26-1Q6PEX3 210 aa7.15□□□□□ -1.26
CDH4-201ENST00000543233 H3BPC8 53 aa7.15□□□□□ -1.27
CDH4-201ENST00000543233 C9orf163Q8N9P6 203 aa7.14□□□□□ -1.27
CDH4-201ENST00000543233 IGLV7-46A0A075B6I9 117 aa7.13□□□□□ -1.27
CDH4-201ENST00000543233 RPL37AP8A6NKH3 93 aa7.13□□□□□ -1.27
CDH4-201ENST00000543233 A0A1B0GW54 56 aa7.13□□□□□ -1.27
CDH4-201ENST00000543233 LINC01556Q5JQF7 62 aa7.13□□□□□ -1.27
CDH4-201ENST00000543233 COL7A1Q02388 2944 aa7.13□□□□□ -1.27
CDH4-201ENST00000543233 A0A087WSZ3 146 aa7.12□□□□□ -1.27
CDH4-201ENST00000543233 H3BNG1 76 aa7.12□□□□□ -1.27
CDH4-201ENST00000543233 K7EIL1 84 aa7.12□□□□□ -1.27
CDH4-201ENST00000543233 LYSTQ99698 3801 aa7.12□□□□□ -1.27
CDH4-201ENST00000543233 IGLV1-50A0A075B6I6 118 aa7.12□□□□□ -1.27
CDH4-201ENST00000543233 GVQW2A0A096LPI5 108 aaPredicted RBP7.12□□□□□ -1.27
CDH4-201ENST00000543233 FAM168BA1KXE4 195 aa7.12□□□□□ -1.27
CDH4-201ENST00000543233 C1orf134Q5TEV5 83 aa7.11□□□□□ -1.27
CDH4-201ENST00000543233 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
CDH4-201ENST00000543233 PLAC8Q9NZF1 115 aa7.1□□□□□ -1.27
CDH4-201ENST00000543233 TGP01266 2768 aa7.09□□□□□ -1.27
CDH4-201ENST00000543233 H0Y9J4 135 aa7.08□□□□□ -1.28
CDH4-201ENST00000543233 HUWE1Q7Z6Z7 4374 aaKnown RBP7.08□□□□□ -1.28
CDH4-201ENST00000543233 Q6ZR54 194 aa7.07□□□□□ -1.28
CDH4-201ENST00000543233 DNAH10OSP0CZ25 163 aa7.07□□□□□ -1.28
CDH4-201ENST00000543233 HRES1P13985 223 aa7.07□□□□□ -1.28
CDH4-201ENST00000543233 CNBPP62633 177 aaKnown RBP7.07□□□□□ -1.28
CDH4-201ENST00000543233 IGKV2-24A0A0C4DH68 120 aa7.06□□□□□ -1.28
CDH4-201ENST00000543233 DHRS4-AS1Q9P1J3 65 aa7.06□□□□□ -1.28
CDH4-201ENST00000543233 SRRM2Q9UQ35 2752 aaKnown RBP7.06□□□□□ -1.28
CDH4-201ENST00000543233 DNAH10Q8IVF4 4471 aa7.05□□□□□ -1.28
CDH4-201ENST00000543233 KRTAP29-1A8MX34 341 aaPredicted RBP7.05□□□□□ -1.28
CDH4-201ENST00000543233 TNP2Q05952 138 aa7.04□□□□□ -1.28
CDH4-201ENST00000543233 DNAH3Q8TD57 4116 aa7.04□□□□□ -1.28
CDH4-201ENST00000543233 RTL8CO15255 209 aa7.04□□□□□ -1.28
CDH4-201ENST00000543233 UBE2DNLQ8IWF7 75 aa7.03□□□□□ -1.28
CDH4-201ENST00000543233 Q6ZRX8 168 aa7.03□□□□□ -1.28
CDH4-201ENST00000543233 MEGF8Q7Z7M0 2845 aa7.02□□□□□ -1.29
CDH4-201ENST00000543233 IGLV5-37A0A075B6J1 123 aa7.01□□□□□ -1.29
CDH4-201ENST00000543233 KRTAP1-5Q9BYS1 174 aa7.01□□□□□ -1.29
CDH4-201ENST00000543233 IGFL1Q6UW32 110 aa7.01□□□□□ -1.29
CDH4-201ENST00000543233 A0A1B0GU69 56 aa6.98□□□□□ -1.29
CDH4-201ENST00000543233 ASB16-AS1Q495Z4 193 aa6.98□□□□□ -1.29
CDH4-201ENST00000543233 KRTAP7-1Q8IUC3 87 aa6.97□□□□□ -1.29
CDH4-201ENST00000543233 MIR22HGQ0VDD5 57 aa6.96□□□□□ -1.29
CDH4-201ENST00000543233 CHTF8P0CG12 524 aa6.96□□□□□ -1.3
CDH4-201ENST00000543233 A0A0A0MQY5 61 aa6.96□□□□□ -1.3
CDH4-201ENST00000543233 A8MWP4 228 aa6.95□□□□□ -1.3
CDH4-201ENST00000543233 REG3GQ6UW15 175 aa6.95□□□□□ -1.3
CDH4-201ENST00000543233 PRKDCP78527 4128 aaKnown RBP6.95□□□□□ -1.3
CDH4-201ENST00000543233 A0A096LNI7 61 aa6.94□□□□□ -1.3
CDH4-201ENST00000543233 PRLHP81277 87 aa6.94□□□□□ -1.3
CDH4-201ENST00000543233 FBN3Q75N90 2809 aa6.94□□□□□ -1.3
CDH4-201ENST00000543233 DNAH7Q8WXX0 4024 aa6.93□□□□□ -1.3
CDH4-201ENST00000543233 ROMO1P60602 79 aa6.93□□□□□ -1.3
CDH4-201ENST00000543233 IGHV6-1A0A0B4J1U7 121 aa6.92□□□□□ -1.3
CDH4-201ENST00000543233 DNAH9Q9NYC9 4486 aa6.92□□□□□ -1.3
CDH4-201ENST00000543233 TLX1NBP0CAT3 122 aa6.9□□□□□ -1.3
CDH4-201ENST00000543233 PLECQ15149 4684 aaKnown RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms