RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 LINC00476Q8WZB0 136 aa5.23□□□□□ -1.57
PDLIM5-221ENST00000542407 IGKV4-1P06312 121 aa5.22□□□□□ -1.57
PDLIM5-221ENST00000542407 DYNC2H1Q8NCM8 4307 aaKnown RBP5.22□□□□□ -1.57
PDLIM5-221ENST00000542407 NBEAL1Q6ZS30 2694 aa5.22□□□□□ -1.57
PDLIM5-221ENST00000542407 C10orf25Q5T742 122 aa5.22□□□□□ -1.57
PDLIM5-221ENST00000542407 UNQ6190/PRO20217Q6UXQ8 127 aa5.22□□□□□ -1.57
PDLIM5-221ENST00000542407 WFDC10BQ8IUB3 73 aa5.22□□□□□ -1.57
PDLIM5-221ENST00000542407 KLK12Q9UKR0 248 aa5.22□□□□□ -1.57
PDLIM5-221ENST00000542407 DEFB131BA0A096LNP1 70 aa5.21□□□□□ -1.58
PDLIM5-221ENST00000542407 COX17Q14061 63 aa5.21□□□□□ -1.58
PDLIM5-221ENST00000542407 XAGE1AQ9HD64 81 aa5.21□□□□□ -1.58
PDLIM5-221ENST00000542407 NOTCH1P46531 2555 aa5.21□□□□□ -1.58
PDLIM5-221ENST00000542407 SMIM29Q86T20 159 aa5.2□□□□□ -1.58
PDLIM5-221ENST00000542407 LOC101927531A0A1B0GV80 90 aa5.2□□□□□ -1.58
PDLIM5-221ENST00000542407 COX7BP24311 80 aa5.2□□□□□ -1.58
PDLIM5-221ENST00000542407 CASC2Q6XLA1 102 aa5.2□□□□□ -1.58
PDLIM5-221ENST00000542407 KRTAP26-1Q6PEX3 210 aa5.19□□□□□ -1.58
PDLIM5-221ENST00000542407 HIGD2BQ4VC39 106 aa5.19□□□□□ -1.58
PDLIM5-221ENST00000542407 IGLV6-57P01721 117 aa5.18□□□□□ -1.58
PDLIM5-221ENST00000542407 DEFB105AQ8NG35 78 aa5.18□□□□□ -1.58
PDLIM5-221ENST00000542407 SPAG11BQ08648 103 aa5.18□□□□□ -1.58
PDLIM5-221ENST00000542407 ASB16-AS1Q495Z4 193 aa5.18□□□□□ -1.58
PDLIM5-221ENST00000542407 H3BQ85 93 aa5.17□□□□□ -1.58
PDLIM5-221ENST00000542407 LINC01556Q5JQF7 62 aa5.16□□□□□ -1.58
PDLIM5-221ENST00000542407 C1orf134Q5TEV5 83 aa5.16□□□□□ -1.58
PDLIM5-221ENST00000542407 COL7A1Q02388 2944 aa5.15□□□□□ -1.58
PDLIM5-221ENST00000542407 LYSTQ99698 3801 aa5.15□□□□□ -1.59
PDLIM5-221ENST00000542407 DNHD1Q96M86 4753 aa5.15□□□□□ -1.59
PDLIM5-221ENST00000542407 DNAH10OSP0CZ25 163 aa5.15□□□□□ -1.59
PDLIM5-221ENST00000542407 MGAM2Q2M2H8 2515 aa5.15□□□□□ -1.59
PDLIM5-221ENST00000542407 DNAH7Q8WXX0 4024 aa5.14□□□□□ -1.59
PDLIM5-221ENST00000542407 ZCCHC13Q8WW36 166 aaKnown RBP5.13□□□□□ -1.59
PDLIM5-221ENST00000542407 LCE6AA0A183 80 aa5.13□□□□□ -1.59
PDLIM5-221ENST00000542407 ELOF1P60002 83 aaKnown RBP5.13□□□□□ -1.59
PDLIM5-221ENST00000542407 C15orf56Q8N910 161 aa5.13□□□□□ -1.59
PDLIM5-221ENST00000542407 B9D2Q9BPU9 175 aa5.13□□□□□ -1.59
PDLIM5-221ENST00000542407 PRKDCP78527 4128 aaKnown RBP5.13□□□□□ -1.59
PDLIM5-221ENST00000542407 A0A087X002 238 aa5.13□□□□□ -1.59
PDLIM5-221ENST00000542407 GVQW2A0A096LPI5 108 aaPredicted RBP5.13□□□□□ -1.59
PDLIM5-221ENST00000542407 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
PDLIM5-221ENST00000542407 CSMD3Q7Z407 3707 aa5.13□□□□□ -1.59
PDLIM5-221ENST00000542407 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.12□□□□□ -1.59
PDLIM5-221ENST00000542407 ST20-AS1Q8NBB2 130 aa5.12□□□□□ -1.59
PDLIM5-221ENST00000542407 C6orf48Q9UBA6 75 aa5.11□□□□□ -1.59
PDLIM5-221ENST00000542407 ETDCA0A1B0GVM5 59 aa5.11□□□□□ -1.59
PDLIM5-221ENST00000542407 DEFB116Q30KQ4 102 aa5.11□□□□□ -1.59
PDLIM5-221ENST00000542407 LINC00208Q96KT6 92 aa5.11□□□□□ -1.59
PDLIM5-221ENST00000542407 ROMO1P60602 79 aa5.1□□□□□ -1.59
PDLIM5-221ENST00000542407 PLECQ15149 4684 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-221ENST00000542407 Q9BRP9 147 aa5.09□□□□□ -1.59
PDLIM5-221ENST00000542407 DNAH10Q8IVF4 4471 aa5.08□□□□□ -1.6
PDLIM5-221ENST00000542407 IGKV2D-24A0A075B6R9 120 aa5.08□□□□□ -1.6
PDLIM5-221ENST00000542407 K7EQZ3 153 aa5.08□□□□□ -1.6
PDLIM5-221ENST00000542407 NDUFB1O75438 58 aa5.08□□□□□ -1.6
PDLIM5-221ENST00000542407 CSAG1Q6PB30 78 aa5.08□□□□□ -1.6
PDLIM5-221ENST00000542407 APLNQ9ULZ1 77 aa5.08□□□□□ -1.6
PDLIM5-221ENST00000542407 STARD9Q9P2P6 4700 aa5.07□□□□□ -1.6
PDLIM5-221ENST00000542407 CASC10Q5T4H9 136 aa5.07□□□□□ -1.6
PDLIM5-221ENST00000542407 SPINK7P58062 85 aa5.07□□□□□ -1.6
PDLIM5-221ENST00000542407 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
PDLIM5-221ENST00000542407 STAB2Q8WWQ8 2551 aa5.07□□□□□ -1.6
PDLIM5-221ENST00000542407 A0A1W2PNM2 257 aa5.07□□□□□ -1.6
PDLIM5-221ENST00000542407 RTL8CO15255 209 aa5.07□□□□□ -1.6
PDLIM5-221ENST00000542407 WFDC13Q8IUB5 93 aa5.07□□□□□ -1.6
PDLIM5-221ENST00000542407 CAMK2N2Q96S95 79 aa5.07□□□□□ -1.6
PDLIM5-221ENST00000542407 KRTAP1-5Q9BYS1 174 aa5.06□□□□□ -1.6
PDLIM5-221ENST00000542407 Q8N377 158 aa5.06□□□□□ -1.6
PDLIM5-221ENST00000542407 MEGF8Q7Z7M0 2845 aa5.05□□□□□ -1.6
PDLIM5-221ENST00000542407 Q6ZR54 194 aa5.05□□□□□ -1.6
PDLIM5-221ENST00000542407 VPS13DQ5THJ4 4388 aa5.05□□□□□ -1.6
PDLIM5-221ENST00000542407 DSCR10P59022 87 aa5.05□□□□□ -1.6
PDLIM5-221ENST00000542407 C1orf137Q5JT78 98 aa5.05□□□□□ -1.6
PDLIM5-221ENST00000542407 KRTAP16-1A8MUX0 517 aa5.04□□□□□ -1.6
PDLIM5-221ENST00000542407 LINC01558Q9Y6Z2 57 aa5.04□□□□□ -1.6
PDLIM5-221ENST00000542407 A0A0G2JQZ4 141 aa5.02□□□□□ -1.61
PDLIM5-221ENST00000542407 A0A1W2PNN7 141 aa5.02□□□□□ -1.61
PDLIM5-221ENST00000542407 PLAC8Q9NZF1 115 aa5.02□□□□□ -1.61
PDLIM5-221ENST00000542407 IGLV5-48A0A075B6I7 105 aa5.01□□□□□ -1.61
PDLIM5-221ENST00000542407 TLX1NBP0CAT3 122 aa5.01□□□□□ -1.61
PDLIM5-221ENST00000542407 RPL37AP8A6NKH3 93 aa5.01□□□□□ -1.61
PDLIM5-221ENST00000542407 CDK2AP2O75956 126 aa5.01□□□□□ -1.61
PDLIM5-221ENST00000542407 REG3GQ6UW15 175 aa5.01□□□□□ -1.61
PDLIM5-221ENST00000542407 SPANXA2-OT1Q8N9U9 137 aa5.01□□□□□ -1.61
PDLIM5-221ENST00000542407 WWC2-AS2Q96NR7 200 aa5.01□□□□□ -1.61
PDLIM5-221ENST00000542407 NUPR2A6NF83 97 aa5.01□□□□□ -1.61
PDLIM5-221ENST00000542407 Q8NBF4 154 aa5.01□□□□□ -1.61
PDLIM5-221ENST00000542407 MIR22HGQ0VDD5 57 aa5□□□□□ -1.61
PDLIM5-221ENST00000542407 LORP23490 312 aaPredicted RBP5□□□□□ -1.61
PDLIM5-221ENST00000542407 CNBPP62633 177 aaKnown RBP4.99□□□□□ -1.61
PDLIM5-221ENST00000542407 SPAG11AQ6PDA7 123 aa4.99□□□□□ -1.61
PDLIM5-221ENST00000542407 A0A1B0GW54 56 aa4.98□□□□□ -1.61
PDLIM5-221ENST00000542407 H0Y9P7 68 aa4.98□□□□□ -1.61
PDLIM5-221ENST00000542407 RPL37AP61513 92 aaKnown RBP4.98□□□□□ -1.61
PDLIM5-221ENST00000542407 UBE2DNLQ8IWF7 75 aa4.98□□□□□ -1.61
PDLIM5-221ENST00000542407 KRTAP7-1Q8IUC3 87 aa4.98□□□□□ -1.61
PDLIM5-221ENST00000542407 C7orf33Q8WU49 177 aa4.98□□□□□ -1.61
PDLIM5-221ENST00000542407 P0C880 135 aa4.98□□□□□ -1.61
PDLIM5-221ENST00000542407 DNAH2Q9P225 4427 aa4.97□□□□□ -1.61
PDLIM5-221ENST00000542407 COA5Q86WW8 74 aa4.97□□□□□ -1.61
PDLIM5-221ENST00000542407 IGLV5-37A0A075B6J1 123 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms