RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 SPINK1P00995 79 aa4.41□□□□□ -1.7
MRPS35-204ENST00000542199 IGKCP01834 107 aa4.41□□□□□ -1.7
MRPS35-204ENST00000542199 FABP4P15090 132 aa4.41□□□□□ -1.7
MRPS35-204ENST00000542199 Q6ZRX8 168 aa4.41□□□□□ -1.7
MRPS35-204ENST00000542199 PMCHL2Q9BQD1 86 aa4.41□□□□□ -1.7
MRPS35-204ENST00000542199 COLCA2A8K830 154 aa4.4□□□□□ -1.71
MRPS35-204ENST00000542199 LGALS3P17931 250 aaKnown RBP4.4□□□□□ -1.71
MRPS35-204ENST00000542199 RPS29P62273 56 aaKnown RBP4.4□□□□□ -1.71
MRPS35-204ENST00000542199 SOSTDC1Q6X4U4 206 aa4.4□□□□□ -1.71
MRPS35-204ENST00000542199 MIEN1Q9BRT3 115 aa4.4□□□□□ -1.71
MRPS35-204ENST00000542199 MOBPQ13875 183 aa4.39□□□□□ -1.71
MRPS35-204ENST00000542199 SSBP3-AS1Q7Z2R9 100 aa4.39□□□□□ -1.71
MRPS35-204ENST00000542199 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
MRPS35-204ENST00000542199 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
MRPS35-204ENST00000542199 TRAV23DV6A0A075B6W5 121 aa4.38□□□□□ -1.71
MRPS35-204ENST00000542199 ZNF73O43830 326 aaPredicted RBP4.38□□□□□ -1.71
MRPS35-204ENST00000542199 S100A7L2Q5SY68 101 aa4.38□□□□□ -1.71
MRPS35-204ENST00000542199 JOSD1Q15040 202 aaPredicted RBP4.37□□□□□ -1.71
MRPS35-204ENST00000542199 ASB16-AS1Q495Z4 193 aa4.37□□□□□ -1.71
MRPS35-204ENST00000542199 SLC7A5P1Q8MH63 180 aa4.37□□□□□ -1.71
MRPS35-204ENST00000542199 SYS1-DBNDD2H3BUS1 97 aa4.36□□□□□ -1.71
MRPS35-204ENST00000542199 BPY2O14599 106 aa4.36□□□□□ -1.71
MRPS35-204ENST00000542199 SLC25A20O43772 301 aa4.36□□□□□ -1.71
MRPS35-204ENST00000542199 NPC2P61916 151 aa4.36□□□□□ -1.71
MRPS35-204ENST00000542199 Q5W150 140 aa4.36□□□□□ -1.71
MRPS35-204ENST00000542199 SPANXCQ9NY87 97 aa4.36□□□□□ -1.71
MRPS35-204ENST00000542199 FLGP20930 4061 aaPredicted RBP4.36□□□□□ -1.71
MRPS35-204ENST00000542199 HIST1H2BKO60814 126 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 TIMM17BO60830 172 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 HIST1H2BJP06899 126 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 HIST1H2BOP23527 126 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 HIST1H2BBP33778 126 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 HIST1H2BDP58876 126 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 HIST1H2BCP62807 126 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 HIST2H2BEQ16778 126 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 C5orf47Q569G3 176 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.35□□□□□ -1.71
MRPS35-204ENST00000542199 LINC01545Q5VT33 79 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 ST20-AS1Q8NBB2 130 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 LINC00308Q8TCZ7 52 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 HIST1H2BHQ93079 126 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 HIST1H2BNQ99877 126 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 HIST1H2BMQ99879 126 aa4.35□□□□□ -1.71
MRPS35-204ENST00000542199 SMIM26A0A096LP01 95 aa4.34□□□□□ -1.71
MRPS35-204ENST00000542199 KRTAP4-1Q9BYQ7 146 aa4.34□□□□□ -1.71
MRPS35-204ENST00000542199 CBY1Q9Y3M2 126 aa4.34□□□□□ -1.71
MRPS35-204ENST00000542199 SPRR1BP22528 89 aa4.33□□□□□ -1.72
MRPS35-204ENST00000542199 C9orf153Q5TBE3 101 aa4.33□□□□□ -1.72
MRPS35-204ENST00000542199 HINT1P49773 126 aaPredicted RBP4.32□□□□□ -1.72
MRPS35-204ENST00000542199 SPANXDQ9BXN6 97 aa4.32□□□□□ -1.72
MRPS35-204ENST00000542199 ZNF815PA8K554 130 aa4.31□□□□□ -1.72
MRPS35-204ENST00000542199 ELOF1P60002 83 aaKnown RBP4.31□□□□□ -1.72
MRPS35-204ENST00000542199 OR13C6PQ8NH95 151 aa4.31□□□□□ -1.72
MRPS35-204ENST00000542199 TTTY13Q9BZ97 58 aa4.31□□□□□ -1.72
MRPS35-204ENST00000542199 C3orf79P0CE67 100 aa4.3□□□□□ -1.72
MRPS35-204ENST00000542199 SLC25A34Q6PIV7 304 aa4.3□□□□□ -1.72
MRPS35-204ENST00000542199 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
MRPS35-204ENST00000542199 COX7BP24311 80 aa4.29□□□□□ -1.72
MRPS35-204ENST00000542199 C6orf99Q4VX62 202 aa4.29□□□□□ -1.72
MRPS35-204ENST00000542199 TRBV7-6A0A0J9YX20 115 aa4.28□□□□□ -1.72
MRPS35-204ENST00000542199 LIMD2Q9BT23 127 aa4.28□□□□□ -1.72
MRPS35-204ENST00000542199 LAMTOR3Q9UHA4 124 aa4.28□□□□□ -1.72
MRPS35-204ENST00000542199 IFITM1P13164 125 aa4.27□□□□□ -1.73
MRPS35-204ENST00000542199 CD164Q04900 197 aa4.27□□□□□ -1.73
MRPS35-204ENST00000542199 IGLV5-48A0A075B6I7 105 aa4.26□□□□□ -1.73
MRPS35-204ENST00000542199 TEX49A0A1B0GTD5 131 aa4.26□□□□□ -1.73
MRPS35-204ENST00000542199 KRTDAPP60985 99 aa4.26□□□□□ -1.73
MRPS35-204ENST00000542199 Q5XG85 94 aa4.26□□□□□ -1.73
MRPS35-204ENST00000542199 HRCT1Q6UXD1 115 aa4.26□□□□□ -1.73
MRPS35-204ENST00000542199 SCGB1D4Q6XE38 83 aa4.26□□□□□ -1.73
MRPS35-204ENST00000542199 COPS9Q8WXC6 57 aa4.26□□□□□ -1.73
MRPS35-204ENST00000542199 C8orf17Q9NRJ1 99 aa4.26□□□□□ -1.73
MRPS35-204ENST00000542199 C20orf202A1L168 122 aa4.25□□□□□ -1.73
MRPS35-204ENST00000542199 TAL2Q16559 108 aa4.25□□□□□ -1.73
MRPS35-204ENST00000542199 KRTAP19-2Q3LHN2 52 aa4.25□□□□□ -1.73
MRPS35-204ENST00000542199 PRO1933Q9H354 126 aa4.25□□□□□ -1.73
MRPS35-204ENST00000542199 MUSTN1Q8IVN3 82 aa4.24□□□□□ -1.73
MRPS35-204ENST00000542199 DEFB105AQ8NG35 78 aa4.24□□□□□ -1.73
MRPS35-204ENST00000542199 C9orf92A6NGG3 77 aa4.23□□□□□ -1.73
MRPS35-204ENST00000542199 H7C2G1 150 aa4.23□□□□□ -1.73
MRPS35-204ENST00000542199 AKR1D1P51857 326 aa4.23□□□□□ -1.73
MRPS35-204ENST00000542199 ATOH7Q8N100 152 aa4.23□□□□□ -1.73
MRPS35-204ENST00000542199 TRAV13-2A0A0B4J235 113 aa4.22□□□□□ -1.73
MRPS35-204ENST00000542199 PCOTHQ58A44 107 aa4.22□□□□□ -1.73
MRPS35-204ENST00000542199 C1orf195Q5TG92 126 aa4.22□□□□□ -1.73
MRPS35-204ENST00000542199 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
MRPS35-204ENST00000542199 A0A0G2JQZ4 141 aa4.21□□□□□ -1.74
MRPS35-204ENST00000542199 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
MRPS35-204ENST00000542199 SMIM11BQ8TCY0 68 aa4.21□□□□□ -1.74
MRPS35-204ENST00000542199 NHP2Q9NX24 153 aaKnown RBP4.21□□□□□ -1.74
MRPS35-204ENST00000542199 MT1HP80294 61 aa4.19□□□□□ -1.74
MRPS35-204ENST00000542199 LINC00575Q6W349 94 aa4.18□□□□□ -1.74
MRPS35-204ENST00000542199 HIST3H2BBQ8N257 126 aa4.18□□□□□ -1.74
MRPS35-204ENST00000542199 HIST1H2BLQ99880 126 aa4.18□□□□□ -1.74
MRPS35-204ENST00000542199 RPL37P61927 97 aaKnown RBP4.17□□□□□ -1.74
MRPS35-204ENST00000542199 TCL1BO95988 128 aa4.16□□□□□ -1.74
MRPS35-204ENST00000542199 VAMP3Q15836 100 aa4.16□□□□□ -1.74
MRPS35-204ENST00000542199 Q6ZQY7 126 aa4.16□□□□□ -1.74
MRPS35-204ENST00000542199 hADV29S1A0JD25 119 aa4.15□□□□□ -1.75
MRPS35-204ENST00000542199 HSBP1L1C9JCN9 74 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms