RNA–Protein interactions for RNA: ENST00000541168.1

SMCO2-205, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-205ENST00000541168 Q9HAA7 133 aa3.7□□□□□ -1.82
SMCO2-205ENST00000541168 SND1-IT1Q9HBX3 110 aa3.7□□□□□ -1.82
SMCO2-205ENST00000541168 LINC00588Q9Y4M8 146 aa3.7□□□□□ -1.82
SMCO2-205ENST00000541168 TRAV23DV6A0A075B6W5 121 aa3.69□□□□□ -1.82
SMCO2-205ENST00000541168 C16orf90A8MZG2 172 aa3.69□□□□□ -1.82
SMCO2-205ENST00000541168 TMEM256-PLSCR3K7ERE1 68 aa3.69□□□□□ -1.82
SMCO2-205ENST00000541168 LECT2O14960 151 aa3.69□□□□□ -1.82
SMCO2-205ENST00000541168 PDE6GP18545 87 aa3.69□□□□□ -1.82
SMCO2-205ENST00000541168 CXCL6P80162 114 aa3.69□□□□□ -1.82
SMCO2-205ENST00000541168 RBM3P98179 157 aaKnown RBP3.69□□□□□ -1.82
SMCO2-205ENST00000541168 BRK1Q8WUW1 75 aa3.69□□□□□ -1.82
SMCO2-205ENST00000541168 FAM104AQ969W3 186 aa3.69□□□□□ -1.82
SMCO2-205ENST00000541168 LINC00467Q9BRT7 94 aa3.69□□□□□ -1.82
SMCO2-205ENST00000541168 PKIGQ9Y2B9 76 aa3.69□□□□□ -1.82
SMCO2-205ENST00000541168 HSPG2P98160 4391 aa3.69□□□□□ -1.82
SMCO2-205ENST00000541168 LRP1BQ9NZR2 4599 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 TRGV2A0A075B6R0 118 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 TRGV1A0A0A0MS02 117 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 IBA57-AS1B1ANH7 110 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 H3BNG1 76 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 K7EQD1 137 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 IGHV3-53P01767 116 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 C6orf226Q5I0X4 101 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 LINC00242Q5T6M2 205 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 Q6ZTI0 123 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 Q6ZVQ6 151 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 MIR7-3HGQ8N6C7 128 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 C11orf72Q8NBR9 251 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 SMIM11BQ8TCY0 68 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 RYR1P21817 5038 aa3.68□□□□□ -1.82
SMCO2-205ENST00000541168 PKD1P98161 4303 aa3.67□□□□□ -1.82
SMCO2-205ENST00000541168 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.67□□□□□ -1.82
SMCO2-205ENST00000541168 LOC110117498A0A087WWA1 95 aa3.67□□□□□ -1.82
SMCO2-205ENST00000541168 TRBV7-6A0A0J9YX20 115 aa3.67□□□□□ -1.82
SMCO2-205ENST00000541168 TRBV10-1A0A0K0K1A3 114 aa3.67□□□□□ -1.82
SMCO2-205ENST00000541168 IGKV2-29A2NJV5 120 aaPredicted RBP3.67□□□□□ -1.82
SMCO2-205ENST00000541168 F8WEM9 126 aa3.67□□□□□ -1.82
SMCO2-205ENST00000541168 NCR3O14931 201 aa3.67□□□□□ -1.82
SMCO2-205ENST00000541168 RNASE13Q5GAN3 156 aaKnown RBP3.67□□□□□ -1.82
SMCO2-205ENST00000541168 ENHOQ6UWT2 76 aa3.67□□□□□ -1.82
SMCO2-205ENST00000541168 FP248Q71RG6 208 aaPredicted RBP3.67□□□□□ -1.82
SMCO2-205ENST00000541168 LINC00337Q8N6G1 96 aa3.67□□□□□ -1.82
SMCO2-205ENST00000541168 A0A096LPF7 62 aa3.66□□□□□ -1.82
SMCO2-205ENST00000541168 ESRGQ1W209 222 aa3.66□□□□□ -1.82
SMCO2-205ENST00000541168 PRR15Q8IV56 129 aa3.66□□□□□ -1.82
SMCO2-205ENST00000541168 COX7B2Q8TF08 81 aa3.66□□□□□ -1.82
SMCO2-205ENST00000541168 DEFB104AQ8WTQ1 72 aa3.66□□□□□ -1.82
SMCO2-205ENST00000541168 ABCA13Q86UQ4 5058 aa3.65□□□□□ -1.82
SMCO2-205ENST00000541168 IGKV2-28A0A075B6P5 120 aa3.65□□□□□ -1.83
SMCO2-205ENST00000541168 TRBV6-4A0A1B0GX49 114 aa3.65□□□□□ -1.83
SMCO2-205ENST00000541168 UBE2L6O14933 153 aa3.65□□□□□ -1.83
SMCO2-205ENST00000541168 IGKV2D-28P01615 120 aa3.65□□□□□ -1.83
SMCO2-205ENST00000541168 SS18Q15532 418 aa3.65□□□□□ -1.83
SMCO2-205ENST00000541168 PRO0255Q9UI72 69 aa3.65□□□□□ -1.83
SMCO2-205ENST00000541168 APOBP04114 4563 aaKnown RBP3.65□□□□□ -1.83
SMCO2-205ENST00000541168 TRBV7-4A0A0J9YYF1 115 aa3.64□□□□□ -1.83
SMCO2-205ENST00000541168 LINC00158P58513 81 aa3.64□□□□□ -1.83
SMCO2-205ENST00000541168 FAM19A1Q7Z5A9 133 aa3.64□□□□□ -1.83
SMCO2-205ENST00000541168 Q8N814 137 aa3.64□□□□□ -1.83
SMCO2-205ENST00000541168 TRGV4A0A0C4DH28 118 aa3.63□□□□□ -1.83
SMCO2-205ENST00000541168 COX6A2Q02221 97 aa3.63□□□□□ -1.83
SMCO2-205ENST00000541168 NREPQ16612 68 aa3.63□□□□□ -1.83
SMCO2-205ENST00000541168 C9orf129Q5T035 196 aaKnown RBP3.63□□□□□ -1.83
SMCO2-205ENST00000541168 Q6ZQT0 140 aa3.63□□□□□ -1.83
SMCO2-205ENST00000541168 Q6ZRN7 208 aaPredicted RBP3.63□□□□□ -1.83
SMCO2-205ENST00000541168 Q6ZRU5 148 aa3.63□□□□□ -1.83
SMCO2-205ENST00000541168 RMI2Q96E14 147 aa3.63□□□□□ -1.83
SMCO2-205ENST00000541168 CDC42SE2Q9NRR3 84 aa3.63□□□□□ -1.83
SMCO2-205ENST00000541168 IGHV3-73A0A0B4J1V6 119 aa3.62□□□□□ -1.83
SMCO2-205ENST00000541168 FUSP35637 526 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMCO2-205ENST00000541168 CD164Q04900 197 aa3.62□□□□□ -1.83
SMCO2-205ENST00000541168 PMAIP1Q13794 54 aa3.62□□□□□ -1.83
SMCO2-205ENST00000541168 TMEM254Q8TBM7 123 aa3.62□□□□□ -1.83
SMCO2-205ENST00000541168 DNAH5Q8TE73 4624 aa3.62□□□□□ -1.83
SMCO2-205ENST00000541168 IGHV3-38A0A0C4DH36 116 aa3.61□□□□□ -1.83
SMCO2-205ENST00000541168 COX17Q14061 63 aa3.61□□□□□ -1.83
SMCO2-205ENST00000541168 WFDC10BQ8IUB3 73 aa3.61□□□□□ -1.83
SMCO2-205ENST00000541168 SNURFQ9Y675 71 aa3.61□□□□□ -1.83
SMCO2-205ENST00000541168 LOC100131303A0A0U1RQF7 123 aa3.6□□□□□ -1.83
SMCO2-205ENST00000541168 A0A0U1RQV1 116 aa3.6□□□□□ -1.83
SMCO2-205ENST00000541168 NTM-AS1Q6ZSK4 140 aa3.6□□□□□ -1.83
SMCO2-205ENST00000541168 Q8IZM0 81 aa3.6□□□□□ -1.83
SMCO2-205ENST00000541168 TOMM7Q9P0U1 55 aa3.6□□□□□ -1.83
SMCO2-205ENST00000541168 A0A087WTM6 91 aa3.59□□□□□ -1.83
SMCO2-205ENST00000541168 HAMPP81172 84 aa3.59□□□□□ -1.83
SMCO2-205ENST00000541168 Q1T7F1 81 aa3.59□□□□□ -1.83
SMCO2-205ENST00000541168 BPY2O14599 106 aa3.58□□□□□ -1.84
SMCO2-205ENST00000541168 PSCAO43653 123 aa3.58□□□□□ -1.84
SMCO2-205ENST00000541168 LINC01556Q5JQF7 62 aa3.58□□□□□ -1.84
SMCO2-205ENST00000541168 LINC00575Q6W349 94 aa3.58□□□□□ -1.84
SMCO2-205ENST00000541168 LINC00474Q9P2X8 69 aa3.58□□□□□ -1.84
SMCO2-205ENST00000541168 IGHV3OR16-9A0A0B4J2B5 98 aa3.57□□□□□ -1.84
SMCO2-205ENST00000541168 UBE2BP63146 152 aa3.57□□□□□ -1.84
SMCO2-205ENST00000541168 LELP1Q5T871 98 aa3.57□□□□□ -1.84
SMCO2-205ENST00000541168 Q5VSD8 79 aa3.57□□□□□ -1.84
SMCO2-205ENST00000541168 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.57□□□□□ -1.84
SMCO2-205ENST00000541168 MRPL55Q7Z7F7 128 aaKnown RBP3.57□□□□□ -1.84
SMCO2-205ENST00000541168 ANAPC11Q9NYG5 84 aa3.57□□□□□ -1.84
SMCO2-205ENST00000541168 FAT1Q14517 4588 aa3.56□□□□□ -1.84
SMCO2-205ENST00000541168 A0A1B0GW54 56 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms