RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 DEFB4AO15263 64 aa6.32□□□□□ -1.4
CLDN2-202ENST00000540876 SERTAD4-AS1Q5TG53 156 aa6.32□□□□□ -1.4
CLDN2-202ENST00000540876 Q8N377 158 aa6.32□□□□□ -1.4
CLDN2-202ENST00000540876 C1orf137Q5JT78 98 aa6.31□□□□□ -1.4
CLDN2-202ENST00000540876 CASC2Q6XLA1 102 aa6.31□□□□□ -1.4
CLDN2-202ENST00000540876 IGLV5-48A0A075B6I7 105 aa6.3□□□□□ -1.4
CLDN2-202ENST00000540876 KRTAP10-11P60412 298 aa6.3□□□□□ -1.4
CLDN2-202ENST00000540876 C6orf48Q9UBA6 75 aa6.29□□□□□ -1.4
CLDN2-202ENST00000540876 Q8NBF4 154 aa6.29□□□□□ -1.4
CLDN2-202ENST00000540876 VPREB1P12018 145 aa6.29□□□□□ -1.4
CLDN2-202ENST00000540876 CMC4P56277 68 aaPredicted RBP6.29□□□□□ -1.4
CLDN2-202ENST00000540876 C19orf73Q9NVV2 129 aa6.29□□□□□ -1.4
CLDN2-202ENST00000540876 A0A1B0GW54 56 aa6.27□□□□□ -1.41
CLDN2-202ENST00000540876 CSNK1G2-AS1Q8NCQ2 148 aa6.27□□□□□ -1.41
CLDN2-202ENST00000540876 LINC01558Q9Y6Z2 57 aa6.27□□□□□ -1.41
CLDN2-202ENST00000540876 MEGF8Q7Z7M0 2845 aa6.27□□□□□ -1.41
CLDN2-202ENST00000540876 HTN3P15516 51 aa6.26□□□□□ -1.41
CLDN2-202ENST00000540876 DEFB135Q30KP9 77 aa6.26□□□□□ -1.41
CLDN2-202ENST00000540876 IGKV2D-24A0A075B6R9 120 aa6.26□□□□□ -1.41
CLDN2-202ENST00000540876 Q8NAQ8 132 aa6.26□□□□□ -1.41
CLDN2-202ENST00000540876 C7orf33Q8WU49 177 aa6.26□□□□□ -1.41
CLDN2-202ENST00000540876 DNAH3Q8TD57 4116 aa6.24□□□□□ -1.41
CLDN2-202ENST00000540876 C9orf163Q8N9P6 203 aa6.24□□□□□ -1.41
CLDN2-202ENST00000540876 TENM3Q9P273 2699 aa6.24□□□□□ -1.41
CLDN2-202ENST00000540876 RPL37AP61513 92 aaKnown RBP6.23□□□□□ -1.41
CLDN2-202ENST00000540876 PCOTHQ58A44 107 aa6.23□□□□□ -1.41
CLDN2-202ENST00000540876 A0A0G2JQZ4 141 aa6.23□□□□□ -1.41
CLDN2-202ENST00000540876 A0A1W2PNN7 141 aa6.23□□□□□ -1.41
CLDN2-202ENST00000540876 PRKDCP78527 4128 aaKnown RBP6.23□□□□□ -1.41
CLDN2-202ENST00000540876 GVQW2A0A096LPI5 108 aaPredicted RBP6.22□□□□□ -1.41
CLDN2-202ENST00000540876 H3BPC8 53 aa6.22□□□□□ -1.41
CLDN2-202ENST00000540876 SPRR4Q96PI1 79 aa6.22□□□□□ -1.41
CLDN2-202ENST00000540876 CAMK2N2Q96S95 79 aa6.22□□□□□ -1.41
CLDN2-202ENST00000540876 COL7A1Q02388 2944 aa6.22□□□□□ -1.41
CLDN2-202ENST00000540876 PLAC8Q9NZF1 115 aa6.21□□□□□ -1.42
CLDN2-202ENST00000540876 PRO0255Q9UI72 69 aa6.21□□□□□ -1.42
CLDN2-202ENST00000540876 IGLV7-46A0A075B6I9 117 aa6.21□□□□□ -1.42
CLDN2-202ENST00000540876 PLA2G1BP04054 148 aaKnown RBP6.2□□□□□ -1.42
CLDN2-202ENST00000540876 EGFEM1PQ0D2K5 195 aa6.2□□□□□ -1.42
CLDN2-202ENST00000540876 X6R8D5 127 aa6.2□□□□□ -1.42
CLDN2-202ENST00000540876 TNP2Q05952 138 aa6.19□□□□□ -1.42
CLDN2-202ENST00000540876 TGP01266 2768 aa6.19□□□□□ -1.42
CLDN2-202ENST00000540876 RETNLBQ9BQ08 111 aa6.18□□□□□ -1.42
CLDN2-202ENST00000540876 IGLV1-50A0A075B6I6 118 aa6.18□□□□□ -1.42
CLDN2-202ENST00000540876 KRTAP29-1A8MX34 341 aaPredicted RBP6.18□□□□□ -1.42
CLDN2-202ENST00000540876 K7EIL1 84 aa6.18□□□□□ -1.42
CLDN2-202ENST00000540876 LINC00476Q8WZB0 136 aa6.18□□□□□ -1.42
CLDN2-202ENST00000540876 CNBPP62633 177 aaKnown RBP6.17□□□□□ -1.42
CLDN2-202ENST00000540876 KRTAP21-3Q3LHN1 58 aa6.17□□□□□ -1.42
CLDN2-202ENST00000540876 DHRS4-AS1Q9P1J3 65 aa6.17□□□□□ -1.42
CLDN2-202ENST00000540876 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
CLDN2-202ENST00000540876 RPL37AP8A6NKH3 93 aa6.16□□□□□ -1.42
CLDN2-202ENST00000540876 STAB2Q8WWQ8 2551 aa6.16□□□□□ -1.42
CLDN2-202ENST00000540876 A0A087WSZ3 146 aa6.16□□□□□ -1.42
CLDN2-202ENST00000540876 HUWE1Q7Z6Z7 4374 aaKnown RBP6.16□□□□□ -1.42
CLDN2-202ENST00000540876 DNAH9Q9NYC9 4486 aa6.15□□□□□ -1.43
CLDN2-202ENST00000540876 Q6ZRX8 168 aa6.14□□□□□ -1.43
CLDN2-202ENST00000540876 ZNF706Q9Y5V0 76 aaPredicted RBP6.13□□□□□ -1.43
CLDN2-202ENST00000540876 HRES1P13985 223 aa6.12□□□□□ -1.43
CLDN2-202ENST00000540876 CSAG1Q6PB30 78 aa6.12□□□□□ -1.43
CLDN2-202ENST00000540876 IGLV5-37A0A075B6J1 123 aa6.12□□□□□ -1.43
CLDN2-202ENST00000540876 SPART-AS1P0CW21 52 aa6.11□□□□□ -1.43
CLDN2-202ENST00000540876 IGFL1Q6UW32 110 aa6.11□□□□□ -1.43
CLDN2-202ENST00000540876 PRR34Q9NV39 138 aa6.1□□□□□ -1.43
CLDN2-202ENST00000540876 RTL8CO15255 209 aa6.09□□□□□ -1.43
CLDN2-202ENST00000540876 H0Y9J4 135 aa6.07□□□□□ -1.44
CLDN2-202ENST00000540876 LELP1Q5T871 98 aa6.07□□□□□ -1.44
CLDN2-202ENST00000540876 Q6ZR54 194 aa6.07□□□□□ -1.44
CLDN2-202ENST00000540876 TENM2Q9NT68 2774 aa6.07□□□□□ -1.44
CLDN2-202ENST00000540876 ASB16-AS1Q495Z4 193 aa6.07□□□□□ -1.44
CLDN2-202ENST00000540876 A8MWP4 228 aa6.05□□□□□ -1.44
CLDN2-202ENST00000540876 CSMD3Q7Z407 3707 aa6.05□□□□□ -1.44
CLDN2-202ENST00000540876 KRTAP4-16G5E9R7 235 aaPredicted RBP6.05□□□□□ -1.44
CLDN2-202ENST00000540876 FAM168BA1KXE4 195 aa6.05□□□□□ -1.44
CLDN2-202ENST00000540876 C1orf134Q5TEV5 83 aa6.05□□□□□ -1.44
CLDN2-202ENST00000540876 C15orf56Q8N910 161 aa6.05□□□□□ -1.44
CLDN2-202ENST00000540876 LYSTQ99698 3801 aa6.04□□□□□ -1.44
CLDN2-202ENST00000540876 IGKV2-24A0A0C4DH68 120 aa6.02□□□□□ -1.45
CLDN2-202ENST00000540876 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
CLDN2-202ENST00000540876 SPRR1AP35321 89 aa6.01□□□□□ -1.45
CLDN2-202ENST00000540876 A0A1B0GU69 56 aa5.98□□□□□ -1.45
CLDN2-202ENST00000540876 SPATA8Q6RVD6 105 aa5.98□□□□□ -1.45
CLDN2-202ENST00000540876 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
CLDN2-202ENST00000540876 KRTAP26-1Q6PEX3 210 aa5.98□□□□□ -1.45
CLDN2-202ENST00000540876 LINC00472Q9H8W2 130 aa5.98□□□□□ -1.45
CLDN2-202ENST00000540876 STARD9Q9P2P6 4700 aa5.97□□□□□ -1.45
CLDN2-202ENST00000540876 A0A087X002 238 aa5.97□□□□□ -1.45
CLDN2-202ENST00000540876 TP53AIP1Q9HCN2 124 aa5.97□□□□□ -1.45
CLDN2-202ENST00000540876 DEFB131BA0A096LNP1 70 aa5.97□□□□□ -1.45
CLDN2-202ENST00000540876 A0A096LNI7 61 aa5.96□□□□□ -1.46
CLDN2-202ENST00000540876 PRLHP81277 87 aa5.96□□□□□ -1.46
CLDN2-202ENST00000540876 PLECQ15149 4684 aaKnown RBP5.95□□□□□ -1.46
CLDN2-202ENST00000540876 REG3GQ6UW15 175 aa5.95□□□□□ -1.46
CLDN2-202ENST00000540876 DNAH7Q8WXX0 4024 aa5.94□□□□□ -1.46
CLDN2-202ENST00000540876 KRTAP7-1Q8IUC3 87 aa5.93□□□□□ -1.46
CLDN2-202ENST00000540876 IGLV8-61A0A075B6I0 122 aa5.93□□□□□ -1.46
CLDN2-202ENST00000540876 UQCR11O14957 56 aa5.92□□□□□ -1.46
CLDN2-202ENST00000540876 ROMO1P60602 79 aa5.92□□□□□ -1.46
CLDN2-202ENST00000540876 PLA2G2DQ9UNK4 145 aa5.92□□□□□ -1.46
CLDN2-202ENST00000540876 A0A0A0MQY5 61 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms