RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ZNF861PO60384 105 aa14.92□□□□□ -0.02
TTC3-225ENST00000540756 APOBP04114 4563 aaKnown RBP14.92□□□□□ -0.02
TTC3-225ENST00000540756 IGLV7-43P04211 117 aa14.91□□□□□ -0.02
TTC3-225ENST00000540756 XGP55808 180 aa14.9□□□□□ -0.02
TTC3-225ENST00000540756 LINC00846Q9NV44 126 aa14.9□□□□□ -0.02
TTC3-225ENST00000540756 ACYP1P07311 99 aa14.89□□□□□ -0.03
TTC3-225ENST00000540756 A0A0G2JQZ4 141 aa14.88□□□□□ -0.03
TTC3-225ENST00000540756 SPRR1BP22528 89 aa14.86□□□□□ -0.03
TTC3-225ENST00000540756 MT-ATP8P03928 68 aa14.85□□□□□ -0.03
TTC3-225ENST00000540756 SPRR4Q96PI1 79 aa14.85□□□□□ -0.03
TTC3-225ENST00000540756 ANAPC11Q9NYG5 84 aa14.83□□□□□ -0.03
TTC3-225ENST00000540756 PDE6GP18545 87 aa14.83□□□□□ -0.04
TTC3-225ENST00000540756 F8WEM9 126 aa14.8□□□□□ -0.04
TTC3-225ENST00000540756 SIGMAR1Q99720 223 aa14.8□□□□□ -0.04
TTC3-225ENST00000540756 FAT1Q14517 4588 aa14.79□□□□□ -0.04
TTC3-225ENST00000540756 A0A1W2PNM2 257 aa14.78□□□□□ -0.04
TTC3-225ENST00000540756 IGFL1Q6UW32 110 aa14.76□□□□□ -0.05
TTC3-225ENST00000540756 SMR3BP02814 79 aaPredicted RBP14.76□□□□□ -0.05
TTC3-225ENST00000540756 LINC00483Q53H64 154 aa14.76□□□□□ -0.05
TTC3-225ENST00000540756 IGLV8-61A0A075B6I0 122 aa14.74□□□□□ -0.05
TTC3-225ENST00000540756 ZNF706Q9Y5V0 76 aaPredicted RBP14.73□□□□□ -0.05
TTC3-225ENST00000540756 IGLV9-49A0A0B4J1Y8 123 aa14.73□□□□□ -0.05
TTC3-225ENST00000540756 LINC00643Q86TS7 51 aa14.7□□□□□ -0.06
TTC3-225ENST00000540756 Q8NBF4 154 aa14.7□□□□□ -0.06
TTC3-225ENST00000540756 C9orf153Q5TBE3 101 aa14.66□□□□□ -0.06
TTC3-225ENST00000540756 Q6ZVQ6 151 aa14.66□□□□□ -0.06
TTC3-225ENST00000540756 UBL5Q9BZL1 73 aa14.65□□□□□ -0.06
TTC3-225ENST00000540756 IGKV3D-7A0A0C4DH55 119 aa14.65□□□□□ -0.06
TTC3-225ENST00000540756 RPL37AP61513 92 aaKnown RBP14.64□□□□□ -0.07
TTC3-225ENST00000540756 MOBPQ13875 183 aa14.61□□□□□ -0.07
TTC3-225ENST00000540756 CRYGAP11844 174 aa14.61□□□□□ -0.07
TTC3-225ENST00000540756 Q6JHZ5 121 aa14.61□□□□□ -0.07
TTC3-225ENST00000540756 EPPK1P58107 5090 aaKnown RBP14.6□□□□□ -0.07
TTC3-225ENST00000540756 C21orf62-AS1Q17RA5 79 aa14.59□□□□□ -0.07
TTC3-225ENST00000540756 HSPG2P98160 4391 aa14.57□□□□□ -0.08
TTC3-225ENST00000540756 A0A087X002 238 aa14.55□□□□□ -0.08
TTC3-225ENST00000540756 TRBV7-7A0A0K0K1E9 115 aa14.54□□□□□ -0.08
TTC3-225ENST00000540756 KRTAP10-4P60372 401 aaPredicted RBP14.54□□□□□ -0.08
TTC3-225ENST00000540756 A0A087WSZ3 146 aa14.54□□□□□ -0.08
TTC3-225ENST00000540756 KRTAP1-4P0C5Y4 121 aa14.54□□□□□ -0.08
TTC3-225ENST00000540756 NREPQ16612 68 aa14.54□□□□□ -0.08
TTC3-225ENST00000540756 HRCT1Q6UXD1 115 aa14.53□□□□□ -0.08
TTC3-225ENST00000540756 RYR1P21817 5038 aa14.52□□□□□ -0.09
TTC3-225ENST00000540756 A0A1B0GW54 56 aa14.51□□□□□ -0.09
TTC3-225ENST00000540756 KRTAP13-2Q52LG2 175 aa14.49□□□□□ -0.09
TTC3-225ENST00000540756 Q6Q795 121 aa14.48□□□□□ -0.09
TTC3-225ENST00000540756 SPINK6Q6UWN8 80 aa14.46□□□□□ -0.09
TTC3-225ENST00000540756 KIAA1109Q2LD37 5005 aa14.46□□□□□ -0.09
TTC3-225ENST00000540756 A0A087WVE0 104 aa14.45□□□□□ -0.1
TTC3-225ENST00000540756 ATP5EP2Q5VTU8 51 aa14.44□□□□□ -0.1
TTC3-225ENST00000540756 HIST1H4AP62805 103 aaKnown RBP14.43□□□□□ -0.1
TTC3-225ENST00000540756 DEFB116Q30KQ4 102 aa14.43□□□□□ -0.1
TTC3-225ENST00000540756 IMUPQ9GZP8 106 aa14.43□□□□□ -0.1
TTC3-225ENST00000540756 PLA2G1BP04054 148 aaKnown RBP14.42□□□□□ -0.1
TTC3-225ENST00000540756 Q8N9L7 120 aa14.41□□□□□ -0.1
TTC3-225ENST00000540756 CXCL6P80162 114 aa14.41□□□□□ -0.1
TTC3-225ENST00000540756 FAM229BQ4G0N7 80 aa14.41□□□□□ -0.1
TTC3-225ENST00000540756 BPY2O14599 106 aa14.39□□□□□ -0.11
TTC3-225ENST00000540756 CDK2AP2O75956 126 aa14.38□□□□□ -0.11
TTC3-225ENST00000540756 KRTAP17-1Q9BYP8 105 aa14.38□□□□□ -0.11
TTC3-225ENST00000540756 SCGB1A1P11684 91 aa14.37□□□□□ -0.11
TTC3-225ENST00000540756 SSBP3-AS1Q7Z2R9 100 aa14.36□□□□□ -0.11
TTC3-225ENST00000540756 FAM236AA0A1B0GUQ0 79 aa14.34□□□□□ -0.11
TTC3-225ENST00000540756 FAM236BA0A1B0GV22 79 aa14.34□□□□□ -0.11
TTC3-225ENST00000540756 PKHD1L1Q86WI1 4243 aa14.33□□□□□ -0.12
TTC3-225ENST00000540756 DSCR10P59022 87 aa14.32□□□□□ -0.12
TTC3-225ENST00000540756 PRR26Q8N8Z3 221 aa14.31□□□□□ -0.12
TTC3-225ENST00000540756 LINC00472Q9H8W2 130 aa14.31□□□□□ -0.12
TTC3-225ENST00000540756 FAM229AH3BQW9 127 aa14.3□□□□□ -0.12
TTC3-225ENST00000540756 PCP4P48539 62 aa14.29□□□□□ -0.12
TTC3-225ENST00000540756 Q5VSD8 79 aa14.29□□□□□ -0.12
TTC3-225ENST00000540756 IGKV4-1P06312 121 aa14.28□□□□□ -0.12
TTC3-225ENST00000540756 Q96NJ1 140 aa14.27□□□□□ -0.13
TTC3-225ENST00000540756 TYMSOSQ8TAI1 123 aa14.26□□□□□ -0.13
TTC3-225ENST00000540756 K7EQZ3 153 aa14.25□□□□□ -0.13
TTC3-225ENST00000540756 LRP1Q07954 4544 aaKnown RBP14.23□□□□□ -0.13
TTC3-225ENST00000540756 CD164Q04900 197 aa14.23□□□□□ -0.13
TTC3-225ENST00000540756 SS18L2Q9UHA2 77 aa14.2□□□□□ -0.14
TTC3-225ENST00000540756 ANAPC13Q9BS18 74 aa14.14□□□□□ -0.15
TTC3-225ENST00000540756 A8MWP4 228 aa14.1□□□□□ -0.15
TTC3-225ENST00000540756 FLG2Q5D862 2391 aaPredicted RBP14.09□□□□□ -0.15
TTC3-225ENST00000540756 TNXBP22105 4242 aa14.08□□□□□ -0.16
TTC3-225ENST00000540756 C4orf48Q5BLP8 95 aa14.08□□□□□ -0.16
TTC3-225ENST00000540756 Q8N1X5 172 aa14.08□□□□□ -0.16
TTC3-225ENST00000540756 J3KT08 172 aa14.07□□□□□ -0.16
TTC3-225ENST00000540756 PRR15Q8IV56 129 aa14.07□□□□□ -0.16
TTC3-225ENST00000540756 LINC00304Q8N9R0 145 aa14.07□□□□□ -0.16
TTC3-225ENST00000540756 FAT3Q8TDW7 4589 aa14.06□□□□□ -0.16
TTC3-225ENST00000540756 MYCBP2O75592 4640 aa14.06□□□□□ -0.16
TTC3-225ENST00000540756 ATOX1O00244 68 aa14.04□□□□□ -0.16
TTC3-225ENST00000540756 ASB16-AS1Q495Z4 193 aa14.03□□□□□ -0.16
TTC3-225ENST00000540756 Q5XG85 94 aa14.03□□□□□ -0.16
TTC3-225ENST00000540756 SPINK1P00995 79 aa14.03□□□□□ -0.16
TTC3-225ENST00000540756 C1orf195Q5TG92 126 aa14.02□□□□□ -0.16
TTC3-225ENST00000540756 HCG22E2RYF7 251 aa14□□□□□ -0.17
TTC3-225ENST00000540756 WFDC13Q8IUB5 93 aa14□□□□□ -0.17
TTC3-225ENST00000540756 IGHV6-1A0A0B4J1U7 121 aa13.98□□□□□ -0.17
TTC3-225ENST00000540756 NDUFB1O75438 58 aa13.98□□□□□ -0.17
TTC3-225ENST00000540756 LIMD2Q9BT23 127 aa13.98□□□□□ -0.17
TTC3-225ENST00000540756 NOTCH2NLQ7Z3S9 236 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms