RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 H0Y9J4 135 aa12.99□□□□□ -0.33
LSM14A-202ENST00000540746 KLKP1Q107X0 134 aa12.98□□□□□ -0.33
LSM14A-202ENST00000540746 SNURFQ9Y675 71 aa12.97□□□□□ -0.33
LSM14A-202ENST00000540746 HECTD4Q9Y4D8 3996 aa12.97□□□□□ -0.33
LSM14A-202ENST00000540746 DSCR10P59022 87 aa12.97□□□□□ -0.33
LSM14A-202ENST00000540746 LINC00474Q9P2X8 69 aa12.97□□□□□ -0.33
LSM14A-202ENST00000540746 DPH3Q96FX2 82 aa12.96□□□□□ -0.34
LSM14A-202ENST00000540746 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.96□□□□□ -0.34
LSM14A-202ENST00000540746 H7BZZ5 65 aa12.95□□□□□ -0.34
LSM14A-202ENST00000540746 UBE2AP49459 152 aa12.95□□□□□ -0.34
LSM14A-202ENST00000540746 DNHD1Q96M86 4753 aa12.95□□□□□ -0.34
LSM14A-202ENST00000540746 OCR1Q9BZK8 76 aa12.94□□□□□ -0.34
LSM14A-202ENST00000540746 PKIGQ9Y2B9 76 aa12.94□□□□□ -0.34
LSM14A-202ENST00000540746 J3KT08 172 aa12.93□□□□□ -0.34
LSM14A-202ENST00000540746 SPRR1BP22528 89 aa12.93□□□□□ -0.34
LSM14A-202ENST00000540746 TGP01266 2768 aa12.93□□□□□ -0.34
LSM14A-202ENST00000540746 DNAH2Q9P225 4427 aa12.92□□□□□ -0.34
LSM14A-202ENST00000540746 A0A087WTM6 91 aa12.92□□□□□ -0.34
LSM14A-202ENST00000540746 SPACA4Q8TDM5 124 aa12.91□□□□□ -0.34
LSM14A-202ENST00000540746 K7EQZ3 153 aa12.91□□□□□ -0.34
LSM14A-202ENST00000540746 KRTAP13-1Q8IUC0 172 aa12.91□□□□□ -0.34
LSM14A-202ENST00000540746 RPS28P62857 69 aaKnown RBP12.9□□□□□ -0.34
LSM14A-202ENST00000540746 A0A087WSZ3 146 aa12.89□□□□□ -0.35
LSM14A-202ENST00000540746 FBN3Q75N90 2809 aa12.89□□□□□ -0.35
LSM14A-202ENST00000540746 DEFB116Q30KQ4 102 aa12.87□□□□□ -0.35
LSM14A-202ENST00000540746 OXTP01178 125 aa12.86□□□□□ -0.35
LSM14A-202ENST00000540746 Q6ZR54 194 aa12.86□□□□□ -0.35
LSM14A-202ENST00000540746 TMEM254Q8TBM7 123 aa12.86□□□□□ -0.35
LSM14A-202ENST00000540746 FAM236DA0A1B0GTK5 79 aa12.83□□□□□ -0.36
LSM14A-202ENST00000540746 FAM236CP0DP71 79 aa12.83□□□□□ -0.36
LSM14A-202ENST00000540746 RTL8CO15255 209 aa12.81□□□□□ -0.36
LSM14A-202ENST00000540746 DNAH17Q9UFH2 4485 aa12.81□□□□□ -0.36
LSM14A-202ENST00000540746 FAM30AQ9NZY2 134 aa12.81□□□□□ -0.36
LSM14A-202ENST00000540746 A0A0U1RQV1 116 aa12.78□□□□□ -0.36
LSM14A-202ENST00000540746 FRAS1Q86XX4 4008 aa12.76□□□□□ -0.37
LSM14A-202ENST00000540746 HCG22E2RYF7 251 aa12.76□□□□□ -0.37
LSM14A-202ENST00000540746 NDUFC1O43677 76 aa12.76□□□□□ -0.37
LSM14A-202ENST00000540746 RPL37AP61513 92 aaKnown RBP12.76□□□□□ -0.37
LSM14A-202ENST00000540746 DNAH8Q96JB1 4490 aa12.73□□□□□ -0.37
LSM14A-202ENST00000540746 LCE6AA0A183 80 aa12.73□□□□□ -0.37
LSM14A-202ENST00000540746 PSORS1C2Q9UIG4 136 aa12.72□□□□□ -0.37
LSM14A-202ENST00000540746 LINC00472Q9H8W2 130 aa12.71□□□□□ -0.37
LSM14A-202ENST00000540746 PLAC8Q9NZF1 115 aa12.7□□□□□ -0.38
LSM14A-202ENST00000540746 IGLV5-52A0A0A0MRZ9 124 aa12.7□□□□□ -0.38
LSM14A-202ENST00000540746 C1orf134Q5TEV5 83 aa12.69□□□□□ -0.38
LSM14A-202ENST00000540746 IGLV9-49A0A0B4J1Y8 123 aa12.69□□□□□ -0.38
LSM14A-202ENST00000540746 WFDC13Q8IUB5 93 aa12.68□□□□□ -0.38
LSM14A-202ENST00000540746 LINC00483Q53H64 154 aa12.67□□□□□ -0.38
LSM14A-202ENST00000540746 SERP1Q9Y6X1 66 aa12.66□□□□□ -0.38
LSM14A-202ENST00000540746 DNAH6Q9C0G6 4158 aa12.65□□□□□ -0.38
LSM14A-202ENST00000540746 KRTAP29-1A8MX34 341 aaPredicted RBP12.64□□□□□ -0.39
LSM14A-202ENST00000540746 LY6G6CO95867 125 aa12.64□□□□□ -0.39
LSM14A-202ENST00000540746 PRR15Q8IV56 129 aa12.63□□□□□ -0.39
LSM14A-202ENST00000540746 A8MWP4 228 aa12.62□□□□□ -0.39
LSM14A-202ENST00000540746 WWC2-AS2Q96NR7 200 aa12.61□□□□□ -0.39
LSM14A-202ENST00000540746 ANAPC11Q9NYG5 84 aa12.61□□□□□ -0.39
LSM14A-202ENST00000540746 ZNF861PO60384 105 aa12.6□□□□□ -0.39
LSM14A-202ENST00000540746 ZCCHC13Q8WW36 166 aaKnown RBP12.6□□□□□ -0.39
LSM14A-202ENST00000540746 ATP5EP56381 51 aaPredicted RBP12.58□□□□□ -0.4
LSM14A-202ENST00000540746 C5orf47Q569G3 176 aa12.57□□□□□ -0.4
LSM14A-202ENST00000540746 Q5XG85 94 aa12.57□□□□□ -0.4
LSM14A-202ENST00000540746 Q96NJ1 140 aa12.57□□□□□ -0.4
LSM14A-202ENST00000540746 ZNF706Q9Y5V0 76 aaPredicted RBP12.57□□□□□ -0.4
LSM14A-202ENST00000540746 HRCT1Q6UXD1 115 aa12.56□□□□□ -0.4
LSM14A-202ENST00000540746 MOBPQ13875 183 aa12.56□□□□□ -0.4
LSM14A-202ENST00000540746 CASC2Q6XLA1 102 aa12.56□□□□□ -0.4
LSM14A-202ENST00000540746 DNAH5Q8TE73 4624 aa12.55□□□□□ -0.4
LSM14A-202ENST00000540746 DNAH11Q96DT5 4516 aa12.53□□□□□ -0.4
LSM14A-202ENST00000540746 KRTAP10-2P60368 255 aa12.52□□□□□ -0.4
LSM14A-202ENST00000540746 ALMS1Q8TCU4 4167 aa12.51□□□□□ -0.41
LSM14A-202ENST00000540746 C4orf26Q17RF5 130 aa12.5□□□□□ -0.41
LSM14A-202ENST00000540746 MMP24-AS1A0A0U1RRL7 71 aa12.49□□□□□ -0.41
LSM14A-202ENST00000540746 IGLV7-43P04211 117 aa12.49□□□□□ -0.41
LSM14A-202ENST00000540746 SVIPQ8NHG7 77 aa12.48□□□□□ -0.41
LSM14A-202ENST00000540746 CIRBP-AS1Q8TBR5 109 aa12.46□□□□□ -0.42
LSM14A-202ENST00000540746 PKD1P98161 4303 aa12.45□□□□□ -0.42
LSM14A-202ENST00000540746 HYDINQ4G0P3 5121 aa12.45□□□□□ -0.42
LSM14A-202ENST00000540746 FP248Q71RG6 208 aaPredicted RBP12.45□□□□□ -0.42
LSM14A-202ENST00000540746 NDUFB1O75438 58 aa12.44□□□□□ -0.42
LSM14A-202ENST00000540746 MP68P56378 58 aa12.42□□□□□ -0.42
LSM14A-202ENST00000540746 FAT2Q9NYQ8 4349 aa12.42□□□□□ -0.42
LSM14A-202ENST00000540746 FAM229BQ4G0N7 80 aa12.42□□□□□ -0.42
LSM14A-202ENST00000540746 SMIM26A0A096LP01 95 aa12.41□□□□□ -0.42
LSM14A-202ENST00000540746 LINC00208Q96KT6 92 aa12.41□□□□□ -0.42
LSM14A-202ENST00000540746 hDV103S1A0JD37 113 aa12.4□□□□□ -0.42
LSM14A-202ENST00000540746 H0Y9P7 68 aa12.39□□□□□ -0.43
LSM14A-202ENST00000540746 ASB16-AS1Q495Z4 193 aa12.39□□□□□ -0.43
LSM14A-202ENST00000540746 TRAV22A0A0B4J277 110 aa12.37□□□□□ -0.43
LSM14A-202ENST00000540746 C8orf17Q9NRJ1 99 aa12.36□□□□□ -0.43
LSM14A-202ENST00000540746 LRP1BQ9NZR2 4599 aa12.36□□□□□ -0.43
LSM14A-202ENST00000540746 KRTAP10-1P60331 282 aa12.35□□□□□ -0.43
LSM14A-202ENST00000540746 IGHV6-1A0A0B4J1U7 121 aa12.34□□□□□ -0.43
LSM14A-202ENST00000540746 A0A1B0GVX0 72 aa12.34□□□□□ -0.43
LSM14A-202ENST00000540746 PRR4Q16378 134 aa12.33□□□□□ -0.44
LSM14A-202ENST00000540746 Q6ZSA8 131 aa12.33□□□□□ -0.44
LSM14A-202ENST00000540746 C1orf64Q8NEQ6 169 aa12.31□□□□□ -0.44
LSM14A-202ENST00000540746 A0A087X002 238 aa12.3□□□□□ -0.44
LSM14A-202ENST00000540746 H3BPC8 53 aa12.3□□□□□ -0.44
LSM14A-202ENST00000540746 NOTCH2NLQ7Z3S9 236 aa12.3□□□□□ -0.44
LSM14A-202ENST00000540746 CYP4F30PQ9H0H9 118 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms