RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 C7orf33Q8WU49 177 aa6.21□□□□□ -1.42
CLIP1-212ENST00000540304 FAM168BA1KXE4 195 aa6.2□□□□□ -1.42
CLIP1-212ENST00000540304 KCNQ1DNQ9H478 68 aa6.2□□□□□ -1.42
CLIP1-212ENST00000540304 PRYO14603 147 aa6.19□□□□□ -1.42
CLIP1-212ENST00000540304 Q5VV11 94 aa6.19□□□□□ -1.42
CLIP1-212ENST00000540304 JMJD7-PLA2G4BH0Y9G9 81 aa6.19□□□□□ -1.42
CLIP1-212ENST00000540304 H3BQ85 93 aa6.19□□□□□ -1.42
CLIP1-212ENST00000540304 Q6ZQY7 126 aa6.19□□□□□ -1.42
CLIP1-212ENST00000540304 LINC00313P59037 77 aa6.18□□□□□ -1.42
CLIP1-212ENST00000540304 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.18□□□□□ -1.42
CLIP1-212ENST00000540304 KRTAP7-1Q8IUC3 87 aa6.18□□□□□ -1.42
CLIP1-212ENST00000540304 VPS13DQ5THJ4 4388 aa6.17□□□□□ -1.42
CLIP1-212ENST00000540304 HCG22E2RYF7 251 aa6.17□□□□□ -1.42
CLIP1-212ENST00000540304 NREPQ16612 68 aa6.17□□□□□ -1.42
CLIP1-212ENST00000540304 UBL5Q9BZL1 73 aa6.17□□□□□ -1.42
CLIP1-212ENST00000540304 KMT2AQ03164 3969 aa6.17□□□□□ -1.42
CLIP1-212ENST00000540304 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.17□□□□□ -1.42
CLIP1-212ENST00000540304 ATP11AUNQ6ZP68 121 aa6.17□□□□□ -1.42
CLIP1-212ENST00000540304 C1orf64Q8NEQ6 169 aa6.17□□□□□ -1.42
CLIP1-212ENST00000540304 IGLV1-50A0A075B6I6 118 aa6.16□□□□□ -1.42
CLIP1-212ENST00000540304 Q6ZRN7 208 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-212ENST00000540304 FBN3Q75N90 2809 aa6.16□□□□□ -1.42
CLIP1-212ENST00000540304 A0A096LNI7 61 aa6.16□□□□□ -1.42
CLIP1-212ENST00000540304 RPL37AP8A6NKH3 93 aa6.16□□□□□ -1.42
CLIP1-212ENST00000540304 UBE2AP49459 152 aa6.16□□□□□ -1.42
CLIP1-212ENST00000540304 DNAH2Q9P225 4427 aa6.15□□□□□ -1.43
CLIP1-212ENST00000540304 CHKB-CPT1BH3BT56 60 aa6.14□□□□□ -1.43
CLIP1-212ENST00000540304 SPRR1AP35321 89 aa6.14□□□□□ -1.43
CLIP1-212ENST00000540304 IGKV2-24A0A0C4DH68 120 aa6.14□□□□□ -1.43
CLIP1-212ENST00000540304 M0R2N4 97 aa6.14□□□□□ -1.43
CLIP1-212ENST00000540304 KRTAP4-16G5E9R7 235 aaPredicted RBP6.13□□□□□ -1.43
CLIP1-212ENST00000540304 LINC01547P58512 204 aaPredicted RBP6.13□□□□□ -1.43
CLIP1-212ENST00000540304 LINC01554Q52M75 96 aa6.13□□□□□ -1.43
CLIP1-212ENST00000540304 Q6ZRX8 168 aa6.13□□□□□ -1.43
CLIP1-212ENST00000540304 C9orf163Q8N9P6 203 aa6.13□□□□□ -1.43
CLIP1-212ENST00000540304 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
CLIP1-212ENST00000540304 ETDCA0A1B0GVM5 59 aa6.12□□□□□ -1.43
CLIP1-212ENST00000540304 HAMPP81172 84 aa6.12□□□□□ -1.43
CLIP1-212ENST00000540304 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
CLIP1-212ENST00000540304 HIGD2AQ9BW72 106 aa6.12□□□□□ -1.43
CLIP1-212ENST00000540304 DHRS4-AS1Q9P1J3 65 aa6.12□□□□□ -1.43
CLIP1-212ENST00000540304 A0A0A0MQY5 61 aa6.12□□□□□ -1.43
CLIP1-212ENST00000540304 PRAC1Q96KF2 57 aa6.12□□□□□ -1.43
CLIP1-212ENST00000540304 LOC110117498A0A087WWA1 95 aa6.11□□□□□ -1.43
CLIP1-212ENST00000540304 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
CLIP1-212ENST00000540304 ERC2-IT1O76042 136 aa6.11□□□□□ -1.43
CLIP1-212ENST00000540304 REG3GQ6UW15 175 aa6.11□□□□□ -1.43
CLIP1-212ENST00000540304 Q6ZR54 194 aa6.11□□□□□ -1.43
CLIP1-212ENST00000540304 SRRM2Q9UQ35 2752 aaKnown RBP6.1□□□□□ -1.43
CLIP1-212ENST00000540304 Q6ZQT0 140 aa6.1□□□□□ -1.43
CLIP1-212ENST00000540304 CHTF8P0CG12 524 aa6.1□□□□□ -1.43
CLIP1-212ENST00000540304 Q9BRP9 147 aa6.1□□□□□ -1.43
CLIP1-212ENST00000540304 PDE6GP18545 87 aa6.09□□□□□ -1.43
CLIP1-212ENST00000540304 A0A087WTM6 91 aa6.09□□□□□ -1.44
CLIP1-212ENST00000540304 BPY2O14599 106 aa6.08□□□□□ -1.44
CLIP1-212ENST00000540304 SCXQ7RTU7 201 aa6.08□□□□□ -1.44
CLIP1-212ENST00000540304 DEFB105AQ8NG35 78 aa6.07□□□□□ -1.44
CLIP1-212ENST00000540304 Q8N377 158 aa6.06□□□□□ -1.44
CLIP1-212ENST00000540304 WWC2-AS2Q96NR7 200 aa6.06□□□□□ -1.44
CLIP1-212ENST00000540304 HECTD4Q9Y4D8 3996 aa6.06□□□□□ -1.44
CLIP1-212ENST00000540304 LY6G6CO95867 125 aa6.06□□□□□ -1.44
CLIP1-212ENST00000540304 MP68P56378 58 aa6.06□□□□□ -1.44
CLIP1-212ENST00000540304 MOBPQ13875 183 aa6.06□□□□□ -1.44
CLIP1-212ENST00000540304 ZNF706Q9Y5V0 76 aaPredicted RBP6.06□□□□□ -1.44
CLIP1-212ENST00000540304 IGLV5-48A0A075B6I7 105 aa6.05□□□□□ -1.44
CLIP1-212ENST00000540304 C1orf134Q5TEV5 83 aa6.05□□□□□ -1.44
CLIP1-212ENST00000540304 A6NED7 52 aa6.05□□□□□ -1.44
CLIP1-212ENST00000540304 FAM229AH3BQW9 127 aa6.05□□□□□ -1.44
CLIP1-212ENST00000540304 PRR4Q16378 134 aa6.05□□□□□ -1.44
CLIP1-212ENST00000540304 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
CLIP1-212ENST00000540304 HYDINQ4G0P3 5121 aa6.04□□□□□ -1.44
CLIP1-212ENST00000540304 ST20-AS1Q8NBB2 130 aa6.04□□□□□ -1.44
CLIP1-212ENST00000540304 OCR1Q9BZK8 76 aa6.04□□□□□ -1.44
CLIP1-212ENST00000540304 PANO1I0J062 215 aa6.03□□□□□ -1.44
CLIP1-212ENST00000540304 RTL8CO15255 209 aa6.03□□□□□ -1.44
CLIP1-212ENST00000540304 CXCL6P80162 114 aa6.03□□□□□ -1.44
CLIP1-212ENST00000540304 LCE2CQ5TA81 110 aa6.03□□□□□ -1.44
CLIP1-212ENST00000540304 SPACA4Q8TDM5 124 aa6.03□□□□□ -1.44
CLIP1-212ENST00000540304 LINC00476Q8WZB0 136 aa6.03□□□□□ -1.44
CLIP1-212ENST00000540304 DNAH17Q9UFH2 4485 aa6.03□□□□□ -1.44
CLIP1-212ENST00000540304 PRLHP81277 87 aa6.03□□□□□ -1.44
CLIP1-212ENST00000540304 ADM2Q7Z4H4 148 aa6.03□□□□□ -1.44
CLIP1-212ENST00000540304 KRTAP11-1Q8IUC1 163 aa6.02□□□□□ -1.45
CLIP1-212ENST00000540304 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.02□□□□□ -1.45
CLIP1-212ENST00000540304 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
CLIP1-212ENST00000540304 H0Y9J4 135 aa6.01□□□□□ -1.45
CLIP1-212ENST00000540304 DNAH6Q9C0G6 4158 aa6□□□□□ -1.45
CLIP1-212ENST00000540304 Q8N9P0 234 aaPredicted RBP6□□□□□ -1.45
CLIP1-212ENST00000540304 FRAS1Q86XX4 4008 aa6□□□□□ -1.45
CLIP1-212ENST00000540304 DNAH8Q96JB1 4490 aa6□□□□□ -1.45
CLIP1-212ENST00000540304 IGLV5-52A0A0A0MRZ9 124 aa5.99□□□□□ -1.45
CLIP1-212ENST00000540304 C3orf84H3BNL1 204 aa5.99□□□□□ -1.45
CLIP1-212ENST00000540304 Q8N9L7 120 aa5.99□□□□□ -1.45
CLIP1-212ENST00000540304 Q75L30 129 aa5.98□□□□□ -1.45
CLIP1-212ENST00000540304 LIMD2Q9BT23 127 aa5.98□□□□□ -1.45
CLIP1-212ENST00000540304 CYP4F30PQ9H0H9 118 aa5.98□□□□□ -1.45
CLIP1-212ENST00000540304 SMIM29Q86T20 159 aa5.97□□□□□ -1.45
CLIP1-212ENST00000540304 A0A0G2JQZ4 141 aa5.97□□□□□ -1.45
CLIP1-212ENST00000540304 C1orf137Q5JT78 98 aa5.97□□□□□ -1.45
CLIP1-212ENST00000540304 DNAH5Q8TE73 4624 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms