RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 COX7BP24311 80 aa10.73□□□□□ -0.69
COPS3-212ENST00000539941 ELOF1P60002 83 aaKnown RBP10.73□□□□□ -0.69
COPS3-212ENST00000539941 RTL8CO15255 209 aa10.72□□□□□ -0.69
COPS3-212ENST00000539941 Q6ZQT0 140 aa10.71□□□□□ -0.69
COPS3-212ENST00000539941 A0A1W2PNN7 141 aa10.7□□□□□ -0.7
COPS3-212ENST00000539941 LINC01547P58512 204 aaPredicted RBP10.7□□□□□ -0.7
COPS3-212ENST00000539941 BRK1Q8WUW1 75 aa10.7□□□□□ -0.7
COPS3-212ENST00000539941 CHTF8P0CG12 524 aa10.69□□□□□ -0.7
COPS3-212ENST00000539941 TNP2Q05952 138 aa10.69□□□□□ -0.7
COPS3-212ENST00000539941 RPL37AP8A6NKH3 93 aa10.68□□□□□ -0.7
COPS3-212ENST00000539941 SPRR1AP35321 89 aa10.68□□□□□ -0.7
COPS3-212ENST00000539941 HECTD4Q9Y4D8 3996 aa10.68□□□□□ -0.7
COPS3-212ENST00000539941 IGLV5-52A0A0A0MRZ9 124 aa10.67□□□□□ -0.7
COPS3-212ENST00000539941 LINC00528Q8N1L1 170 aa10.67□□□□□ -0.7
COPS3-212ENST00000539941 TRBV7-4A0A0J9YYF1 115 aa10.66□□□□□ -0.7
COPS3-212ENST00000539941 SPACA4Q8TDM5 124 aa10.66□□□□□ -0.7
COPS3-212ENST00000539941 KRTAP4-16G5E9R7 235 aaPredicted RBP10.65□□□□□ -0.7
COPS3-212ENST00000539941 Q6ZVQ6 151 aa10.65□□□□□ -0.7
COPS3-212ENST00000539941 SNURFQ9Y675 71 aa10.64□□□□□ -0.71
COPS3-212ENST00000539941 REG3GQ6UW15 175 aa10.63□□□□□ -0.71
COPS3-212ENST00000539941 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.63□□□□□ -0.71
COPS3-212ENST00000539941 ETDCA0A1B0GVM5 59 aa10.63□□□□□ -0.71
COPS3-212ENST00000539941 HAMPP81172 84 aa10.63□□□□□ -0.71
COPS3-212ENST00000539941 PANO1I0J062 215 aa10.62□□□□□ -0.71
COPS3-212ENST00000539941 Q6ZRX8 168 aa10.62□□□□□ -0.71
COPS3-212ENST00000539941 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.62□□□□□ -0.71
COPS3-212ENST00000539941 DHRS4-AS1Q9P1J3 65 aa10.61□□□□□ -0.71
COPS3-212ENST00000539941 NREPQ16612 68 aa10.6□□□□□ -0.71
COPS3-212ENST00000539941 TMEM254Q8TBM7 123 aa10.6□□□□□ -0.71
COPS3-212ENST00000539941 Q6ZQY7 126 aa10.6□□□□□ -0.71
COPS3-212ENST00000539941 PHF5AQ7RTV0 110 aaKnown RBP10.6□□□□□ -0.71
COPS3-212ENST00000539941 FUSP35637 526 aaKnown RBP eCLIP10.59□□□□□ -0.71
COPS3-212ENST00000539941 UBE2BP63146 152 aa10.59□□□□□ -0.71
COPS3-212ENST00000539941 PRR15Q8IV56 129 aa10.59□□□□□ -0.71
COPS3-212ENST00000539941 FAT2Q9NYQ8 4349 aa10.57□□□□□ -0.72
COPS3-212ENST00000539941 PLAC8Q9NZF1 115 aa10.57□□□□□ -0.72
COPS3-212ENST00000539941 DNAH11Q96DT5 4516 aa10.57□□□□□ -0.72
COPS3-212ENST00000539941 KRTAP10-2P60368 255 aa10.55□□□□□ -0.72
COPS3-212ENST00000539941 A0A0U1RQV1 116 aa10.54□□□□□ -0.72
COPS3-212ENST00000539941 Q9BRP9 147 aa10.54□□□□□ -0.72
COPS3-212ENST00000539941 BPY2O14599 106 aa10.53□□□□□ -0.72
COPS3-212ENST00000539941 H0Y9J4 135 aa10.52□□□□□ -0.73
COPS3-212ENST00000539941 KRTAP11-1Q8IUC1 163 aa10.52□□□□□ -0.73
COPS3-212ENST00000539941 PMAIP1Q13794 54 aa10.51□□□□□ -0.73
COPS3-212ENST00000539941 DNAH5Q8TE73 4624 aa10.51□□□□□ -0.73
COPS3-212ENST00000539941 DNAH8Q96JB1 4490 aa10.48□□□□□ -0.73
COPS3-212ENST00000539941 Q1T7F1 81 aa10.47□□□□□ -0.73
COPS3-212ENST00000539941 MPLKIPQ8TAP9 179 aa10.47□□□□□ -0.73
COPS3-212ENST00000539941 PKD1P98161 4303 aa10.47□□□□□ -0.73
COPS3-212ENST00000539941 PRLHP81277 87 aa10.47□□□□□ -0.73
COPS3-212ENST00000539941 IGLV5-48A0A075B6I7 105 aa10.46□□□□□ -0.74
COPS3-212ENST00000539941 Q6ZSA8 131 aa10.46□□□□□ -0.74
COPS3-212ENST00000539941 OCR1Q9BZK8 76 aa10.45□□□□□ -0.74
COPS3-212ENST00000539941 UBE2AP49459 152 aa10.44□□□□□ -0.74
COPS3-212ENST00000539941 HERC2O95714 4834 aa10.44□□□□□ -0.74
COPS3-212ENST00000539941 PKHD1P08F94 4074 aa10.44□□□□□ -0.74
COPS3-212ENST00000539941 FAM229BQ4G0N7 80 aa10.44□□□□□ -0.74
COPS3-212ENST00000539941 Q8N377 158 aa10.44□□□□□ -0.74
COPS3-212ENST00000539941 A0A1B0GVY2 172 aa10.43□□□□□ -0.74
COPS3-212ENST00000539941 KRTAP10-1P60331 282 aa10.43□□□□□ -0.74
COPS3-212ENST00000539941 KRTAP13-1Q8IUC0 172 aa10.42□□□□□ -0.74
COPS3-212ENST00000539941 HIGD2AQ9BW72 106 aa10.42□□□□□ -0.74
COPS3-212ENST00000539941 DYNC1H1Q14204 4646 aaKnown RBP10.42□□□□□ -0.74
COPS3-212ENST00000539941 KIAA1109Q2LD37 5005 aa10.42□□□□□ -0.74
COPS3-212ENST00000539941 hDV103S1A0JD37 113 aa10.41□□□□□ -0.74
COPS3-212ENST00000539941 ST20-AS1Q8NBB2 130 aa10.41□□□□□ -0.74
COPS3-212ENST00000539941 DEFB105AQ8NG35 78 aa10.41□□□□□ -0.74
COPS3-212ENST00000539941 FAM30AQ9NZY2 134 aa10.41□□□□□ -0.74
COPS3-212ENST00000539941 A0A1B0GW54 56 aa10.41□□□□□ -0.74
COPS3-212ENST00000539941 CD164Q04900 197 aa10.41□□□□□ -0.74
COPS3-212ENST00000539941 PSORS1C2Q9UIG4 136 aa10.4□□□□□ -0.74
COPS3-212ENST00000539941 CIRBP-AS1Q8TBR5 109 aa10.39□□□□□ -0.75
COPS3-212ENST00000539941 IGKV4-1P06312 121 aa10.38□□□□□ -0.75
COPS3-212ENST00000539941 SCXQ7RTU7 201 aa10.38□□□□□ -0.75
COPS3-212ENST00000539941 C1orf137Q5JT78 98 aa10.35□□□□□ -0.75
COPS3-212ENST00000539941 SPRR1BP22528 89 aa10.34□□□□□ -0.75
COPS3-212ENST00000539941 ZNF861PO60384 105 aa10.32□□□□□ -0.76
COPS3-212ENST00000539941 CYP4F30PQ9H0H9 118 aa10.32□□□□□ -0.76
COPS3-212ENST00000539941 SMIM29Q86T20 159 aa10.31□□□□□ -0.76
COPS3-212ENST00000539941 IGLV7-43P04211 117 aa10.29□□□□□ -0.76
COPS3-212ENST00000539941 ZNF706Q9Y5V0 76 aaPredicted RBP10.29□□□□□ -0.76
COPS3-212ENST00000539941 NDUFB1O75438 58 aa10.28□□□□□ -0.76
COPS3-212ENST00000539941 IGLV8-61A0A075B6I0 122 aa10.27□□□□□ -0.77
COPS3-212ENST00000539941 RYR1P21817 5038 aa10.26□□□□□ -0.77
COPS3-212ENST00000539941 SPRR4Q96PI1 79 aa10.26□□□□□ -0.77
COPS3-212ENST00000539941 KRTAP17-1Q9BYP8 105 aa10.26□□□□□ -0.77
COPS3-212ENST00000539941 LRP1BQ9NZR2 4599 aa10.26□□□□□ -0.77
COPS3-212ENST00000539941 PCLOQ9Y6V0 5065 aa10.25□□□□□ -0.77
COPS3-212ENST00000539941 C1orf64Q8NEQ6 169 aa10.25□□□□□ -0.77
COPS3-212ENST00000539941 ZCCHC13Q8WW36 166 aaKnown RBP10.25□□□□□ -0.77
COPS3-212ENST00000539941 LINC00483Q53H64 154 aa10.24□□□□□ -0.77
COPS3-212ENST00000539941 TRAV22A0A0B4J277 110 aa10.22□□□□□ -0.77
COPS3-212ENST00000539941 HSPG2P98160 4391 aa10.21□□□□□ -0.78
COPS3-212ENST00000539941 Q8NBF4 154 aa10.19□□□□□ -0.78
COPS3-212ENST00000539941 Q8N9L7 120 aa10.18□□□□□ -0.78
COPS3-212ENST00000539941 A0A1W2PNM2 257 aa10.17□□□□□ -0.78
COPS3-212ENST00000539941 IGFL1Q6UW32 110 aa10.17□□□□□ -0.78
COPS3-212ENST00000539941 LIMD2Q9BT23 127 aa10.17□□□□□ -0.78
COPS3-212ENST00000539941 NDUFS5O43920 106 aa10.16□□□□□ -0.78
COPS3-212ENST00000539941 KTN1-AS1Q86SY8 53 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms