RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 IGLV3-1P01715 115 aa2□□□□□ -2.09
AC055720.1-201ENST00000539552 RNASE3P12724 160 aaKnown RBP2□□□□□ -2.09
AC055720.1-201ENST00000539552 CFAP126Q5VTH2 177 aa2□□□□□ -2.09
AC055720.1-201ENST00000539552 NDUFA4L2Q9NRX3 87 aa2□□□□□ -2.09
AC055720.1-201ENST00000539552 LENEPQ9Y5L5 61 aa2□□□□□ -2.09
AC055720.1-201ENST00000539552 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
AC055720.1-201ENST00000539552 MED12LQ86YW9 2145 aa2□□□□□ -2.09
AC055720.1-201ENST00000539552 HEATR1Q9H583 2144 aaKnown RBP1.99□□□□□ -2.09
AC055720.1-201ENST00000539552 TRBV6-7A0A0A0MS04 114 aa1.99□□□□□ -2.09
AC055720.1-201ENST00000539552 LOC101927531A0A1B0GV80 90 aa1.99□□□□□ -2.09
AC055720.1-201ENST00000539552 SSBP1Q04837 148 aaKnown RBP1.99□□□□□ -2.09
AC055720.1-201ENST00000539552 TMEM170BQ5T4T1 132 aa1.99□□□□□ -2.09
AC055720.1-201ENST00000539552 XAF1Q6GPH4 301 aa1.99□□□□□ -2.09
AC055720.1-201ENST00000539552 Q86TA4 180 aa1.99□□□□□ -2.09
AC055720.1-201ENST00000539552 C20orf197Q8N268 126 aa1.99□□□□□ -2.09
AC055720.1-201ENST00000539552 KLK9Q9UKQ9 250 aa1.99□□□□□ -2.09
AC055720.1-201ENST00000539552 V9GYH0 126 aa1.99□□□□□ -2.09
AC055720.1-201ENST00000539552 HMGN4O00479 90 aa1.98□□□□□ -2.09
AC055720.1-201ENST00000539552 DEFB121Q5J5C9 76 aa1.98□□□□□ -2.09
AC055720.1-201ENST00000539552 SFTA2Q6UW10 78 aa1.98□□□□□ -2.09
AC055720.1-201ENST00000539552 TVP23CQ96ET8 276 aa1.98□□□□□ -2.09
AC055720.1-201ENST00000539552 TMEM14BQ9NUH8 114 aa1.98□□□□□ -2.09
AC055720.1-201ENST00000539552 MUC17Q685J3 4493 aa1.97□□□□□ -2.09
AC055720.1-201ENST00000539552 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
AC055720.1-201ENST00000539552 IGLV3-32A0A0A0MS00 114 aa1.97□□□□□ -2.09
AC055720.1-201ENST00000539552 TRGV4A0A0C4DH28 118 aa1.97□□□□□ -2.09
AC055720.1-201ENST00000539552 DEFB108AA8MXU0 73 aa1.97□□□□□ -2.09
AC055720.1-201ENST00000539552 IGKV1-17P01599 117 aa1.97□□□□□ -2.09
AC055720.1-201ENST00000539552 HMGN2P05204 90 aaKnown RBP1.97□□□□□ -2.09
AC055720.1-201ENST00000539552 SMIM13P0DJ93 91 aa1.97□□□□□ -2.09
AC055720.1-201ENST00000539552 CCL3L1P16619 93 aa1.97□□□□□ -2.09
AC055720.1-201ENST00000539552 ZNF815PA8K554 130 aa1.96□□□□□ -2.1
AC055720.1-201ENST00000539552 PPP1R17O96001 155 aa1.96□□□□□ -2.1
AC055720.1-201ENST00000539552 SAA2P0DJI9 122 aaPredicted RBP1.96□□□□□ -2.1
AC055720.1-201ENST00000539552 COX7B2Q8TF08 81 aa1.96□□□□□ -2.1
AC055720.1-201ENST00000539552 AMELXQ99217 191 aa1.96□□□□□ -2.1
AC055720.1-201ENST00000539552 TTTY12Q9BZ98 90 aa1.96□□□□□ -2.1
AC055720.1-201ENST00000539552 WFDC10AQ9H1F0 79 aa1.96□□□□□ -2.1
AC055720.1-201ENST00000539552 TMEM14CQ9P0S9 112 aa1.96□□□□□ -2.1
AC055720.1-201ENST00000539552 ARFGEF3Q5TH69 2177 aa1.95□□□□□ -2.1
AC055720.1-201ENST00000539552 IGKV3D-7A0A0C4DH55 119 aa1.95□□□□□ -2.1
AC055720.1-201ENST00000539552 IGKV3OR2-268A0A0C4DH90 116 aa1.95□□□□□ -2.1
AC055720.1-201ENST00000539552 M0R2N4 97 aa1.95□□□□□ -2.1
AC055720.1-201ENST00000539552 INE1O15225 51 aa1.95□□□□□ -2.1
AC055720.1-201ENST00000539552 LY6G6CO95867 125 aa1.95□□□□□ -2.1
AC055720.1-201ENST00000539552 SPAG11BQ08648 103 aa1.95□□□□□ -2.1
AC055720.1-201ENST00000539552 PSMG4Q5JS54 123 aa1.95□□□□□ -2.1
AC055720.1-201ENST00000539552 FAM74A4Q5TZK3 123 aa1.95□□□□□ -2.1
AC055720.1-201ENST00000539552 SPAG11AQ6PDA7 123 aa1.95□□□□□ -2.1
AC055720.1-201ENST00000539552 A0A087WWC5 75 aa1.94□□□□□ -2.1
AC055720.1-201ENST00000539552 C7orf77A4D0Y5 90 aa1.94□□□□□ -2.1
AC055720.1-201ENST00000539552 F8WEM9 126 aa1.94□□□□□ -2.1
AC055720.1-201ENST00000539552 PPP1R1CQ8WVI7 109 aa1.94□□□□□ -2.1
AC055720.1-201ENST00000539552 TXNDC17Q9BRA2 123 aa1.94□□□□□ -2.1
AC055720.1-201ENST00000539552 TNCP24821 2201 aa1.94□□□□□ -2.1
AC055720.1-201ENST00000539552 NBDYA0A0U1RRE5 68 aa1.93□□□□□ -2.1
AC055720.1-201ENST00000539552 MYMXA0A1B0GTQ4 84 aa1.93□□□□□ -2.1
AC055720.1-201ENST00000539552 IQCF6A8MYZ5 107 aa1.93□□□□□ -2.1
AC055720.1-201ENST00000539552 UMAD1C9J7I0 102 aa1.93□□□□□ -2.1
AC055720.1-201ENST00000539552 DNAL4O96015 105 aa1.93□□□□□ -2.1
AC055720.1-201ENST00000539552 RPL37AP61513 92 aaKnown RBP1.93□□□□□ -2.1
AC055720.1-201ENST00000539552 LINC00322Q6ZN03 302 aaPredicted RBP1.93□□□□□ -2.1
AC055720.1-201ENST00000539552 COA5Q86WW8 74 aa1.93□□□□□ -2.1
AC055720.1-201ENST00000539552 PSENENQ9NZ42 101 aa1.93□□□□□ -2.1
AC055720.1-201ENST00000539552 R4GMQ9 66 aa1.93□□□□□ -2.1
AC055720.1-201ENST00000539552 ARL2-SNX15V9GYD0 113 aa1.93□□□□□ -2.1
AC055720.1-201ENST00000539552 IGKV2-40A0A087WW87 121 aaPredicted RBP1.92□□□□□ -2.1
AC055720.1-201ENST00000539552 LOC110117498A0A087WWA1 95 aa1.92□□□□□ -2.1
AC055720.1-201ENST00000539552 TRBV6-5A0A0K0K1A5 114 aa1.92□□□□□ -2.1
AC055720.1-201ENST00000539552 IGKV2D-40P01614 121 aaPredicted RBP1.92□□□□□ -2.1
AC055720.1-201ENST00000539552 CCL18P55774 89 aa1.92□□□□□ -2.1
AC055720.1-201ENST00000539552 HCP5Q6MZN7 132 aa1.92□□□□□ -2.1
AC055720.1-201ENST00000539552 FAM223BA6NKX1 122 aa1.91□□□□□ -2.1
AC055720.1-201ENST00000539552 F8VRH5 84 aa1.91□□□□□ -2.1
AC055720.1-201ENST00000539552 IGKV4-1P06312 121 aa1.91□□□□□ -2.1
AC055720.1-201ENST00000539552 ARMS2P0C7Q2 107 aa1.91□□□□□ -2.1
AC055720.1-201ENST00000539552 FXYD3Q14802 87 aa1.91□□□□□ -2.1
AC055720.1-201ENST00000539552 PLGLAQ15195 96 aa1.91□□□□□ -2.1
AC055720.1-201ENST00000539552 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
AC055720.1-201ENST00000539552 LINC00304Q8N9R0 145 aa1.91□□□□□ -2.1
AC055720.1-201ENST00000539552 LINC01558Q9Y6Z2 57 aa1.91□□□□□ -2.1
AC055720.1-201ENST00000539552 V9GYV3 84 aa1.91□□□□□ -2.1
AC055720.1-201ENST00000539552 A0A087WTM6 91 aa1.9□□□□□ -2.11
AC055720.1-201ENST00000539552 A0A1B0GWA3 101 aa1.9□□□□□ -2.11
AC055720.1-201ENST00000539552 CEBPZOSA8MTT3 80 aa1.9□□□□□ -2.11
AC055720.1-201ENST00000539552 FXYD4P59646 89 aa1.9□□□□□ -2.11
AC055720.1-201ENST00000539552 Q6ZRN7 208 aaPredicted RBP1.9□□□□□ -2.11
AC055720.1-201ENST00000539552 C5orf56Q8N8D9 126 aa1.9□□□□□ -2.11
AC055720.1-201ENST00000539552 ZNF563Q8TA94 476 aa1.9□□□□□ -2.11
AC055720.1-201ENST00000539552 DOCK11Q5JSL3 2073 aa1.9□□□□□ -2.11
AC055720.1-201ENST00000539552 SORL1Q92673 2214 aa1.9□□□□□ -2.11
AC055720.1-201ENST00000539552 IGKV2-29A2NJV5 120 aaPredicted RBP1.89□□□□□ -2.11
AC055720.1-201ENST00000539552 HCRTO43612 131 aa1.89□□□□□ -2.11
AC055720.1-201ENST00000539552 Q5VSD8 79 aa1.89□□□□□ -2.11
AC055720.1-201ENST00000539552 ZNF625Q96I27 306 aaPredicted RBP1.89□□□□□ -2.11
AC055720.1-201ENST00000539552 WFDC6Q9BQY6 131 aa1.89□□□□□ -2.11
AC055720.1-201ENST00000539552 M0R135 149 aa1.88□□□□□ -2.11
AC055720.1-201ENST00000539552 UQCR11O14957 56 aa1.88□□□□□ -2.11
AC055720.1-201ENST00000539552 LEPROTL1O95214 131 aa1.88□□□□□ -2.11
AC055720.1-201ENST00000539552 GNGT1P63211 74 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms