RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 SPACA4Q8TDM5 124 aa11.11□□□□□ -0.63
GNE-204ENST00000539208 RPS28P62857 69 aaKnown RBP11.1□□□□□ -0.63
GNE-204ENST00000539208 KRTAP13-1Q8IUC0 172 aa11.09□□□□□ -0.63
GNE-204ENST00000539208 DSCR10P59022 87 aa11.09□□□□□ -0.63
GNE-204ENST00000539208 Q6ZR54 194 aa11.09□□□□□ -0.63
GNE-204ENST00000539208 VPS13DQ5THJ4 4388 aa11.08□□□□□ -0.64
GNE-204ENST00000539208 STARD9Q9P2P6 4700 aa11.07□□□□□ -0.64
GNE-204ENST00000539208 DPH3Q96FX2 82 aa11.07□□□□□ -0.64
GNE-204ENST00000539208 OCR1Q9BZK8 76 aa11.07□□□□□ -0.64
GNE-204ENST00000539208 A0A0G2JQZ4 141 aa11.06□□□□□ -0.64
GNE-204ENST00000539208 J3KT08 172 aa11.06□□□□□ -0.64
GNE-204ENST00000539208 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.06□□□□□ -0.64
GNE-204ENST00000539208 H7BZZ5 65 aa11.04□□□□□ -0.64
GNE-204ENST00000539208 PRKDCP78527 4128 aaKnown RBP11.03□□□□□ -0.64
GNE-204ENST00000539208 MEGF8Q7Z7M0 2845 aa11.02□□□□□ -0.65
GNE-204ENST00000539208 A0A087WSZ3 146 aa11.01□□□□□ -0.65
GNE-204ENST00000539208 NDUFC1O43677 76 aa11.01□□□□□ -0.65
GNE-204ENST00000539208 SNURFQ9Y675 71 aa11.01□□□□□ -0.65
GNE-204ENST00000539208 K7EQZ3 153 aa11.01□□□□□ -0.65
GNE-204ENST00000539208 RTL8CO15255 209 aa11.01□□□□□ -0.65
GNE-204ENST00000539208 TMEM254Q8TBM7 123 aa11□□□□□ -0.65
GNE-204ENST00000539208 FAM236DA0A1B0GTK5 79 aa10.97□□□□□ -0.65
GNE-204ENST00000539208 FAM236CP0DP71 79 aa10.97□□□□□ -0.65
GNE-204ENST00000539208 PLAC8Q9NZF1 115 aa10.96□□□□□ -0.66
GNE-204ENST00000539208 A0A0U1RQV1 116 aa10.94□□□□□ -0.66
GNE-204ENST00000539208 C1orf134Q5TEV5 83 aa10.94□□□□□ -0.66
GNE-204ENST00000539208 HCG22E2RYF7 251 aa10.94□□□□□ -0.66
GNE-204ENST00000539208 SRRM2Q9UQ35 2752 aaKnown RBP10.94□□□□□ -0.66
GNE-204ENST00000539208 LCE6AA0A183 80 aa10.93□□□□□ -0.66
GNE-204ENST00000539208 LINC00483Q53H64 154 aa10.93□□□□□ -0.66
GNE-204ENST00000539208 HECTD4Q9Y4D8 3996 aa10.92□□□□□ -0.66
GNE-204ENST00000539208 IGLV5-52A0A0A0MRZ9 124 aa10.92□□□□□ -0.66
GNE-204ENST00000539208 DEFB116Q30KQ4 102 aa10.92□□□□□ -0.66
GNE-204ENST00000539208 FAM30AQ9NZY2 134 aa10.92□□□□□ -0.66
GNE-204ENST00000539208 LINC00472Q9H8W2 130 aa10.9□□□□□ -0.66
GNE-204ENST00000539208 PSORS1C2Q9UIG4 136 aa10.9□□□□□ -0.66
GNE-204ENST00000539208 ZNF706Q9Y5V0 76 aaPredicted RBP10.9□□□□□ -0.66
GNE-204ENST00000539208 RPL37AP61513 92 aaKnown RBP10.9□□□□□ -0.66
GNE-204ENST00000539208 OXTP01178 125 aa10.87□□□□□ -0.67
GNE-204ENST00000539208 ATP5EP56381 51 aaPredicted RBP10.87□□□□□ -0.67
GNE-204ENST00000539208 SERP1Q9Y6X1 66 aa10.86□□□□□ -0.67
GNE-204ENST00000539208 KMT2AQ03164 3969 aa10.86□□□□□ -0.67
GNE-204ENST00000539208 ZNF861PO60384 105 aa10.85□□□□□ -0.67
GNE-204ENST00000539208 A8MWP4 228 aa10.84□□□□□ -0.67
GNE-204ENST00000539208 LY6G6CO95867 125 aa10.84□□□□□ -0.67
GNE-204ENST00000539208 PRR15Q8IV56 129 aa10.84□□□□□ -0.67
GNE-204ENST00000539208 DNAH2Q9P225 4427 aa10.84□□□□□ -0.67
GNE-204ENST00000539208 DNAH17Q9UFH2 4485 aa10.84□□□□□ -0.67
GNE-204ENST00000539208 C5orf47Q569G3 176 aa10.83□□□□□ -0.68
GNE-204ENST00000539208 DNHD1Q96M86 4753 aa10.83□□□□□ -0.68
GNE-204ENST00000539208 IGLV9-49A0A0B4J1Y8 123 aa10.83□□□□□ -0.68
GNE-204ENST00000539208 KRTAP29-1A8MX34 341 aaPredicted RBP10.83□□□□□ -0.68
GNE-204ENST00000539208 WWC2-AS2Q96NR7 200 aa10.82□□□□□ -0.68
GNE-204ENST00000539208 FBN3Q75N90 2809 aa10.81□□□□□ -0.68
GNE-204ENST00000539208 WFDC13Q8IUB5 93 aa10.8□□□□□ -0.68
GNE-204ENST00000539208 ZCCHC13Q8WW36 166 aaKnown RBP10.79□□□□□ -0.68
GNE-204ENST00000539208 CASC2Q6XLA1 102 aa10.77□□□□□ -0.69
GNE-204ENST00000539208 Q96NJ1 140 aa10.76□□□□□ -0.69
GNE-204ENST00000539208 DNAH6Q9C0G6 4158 aa10.75□□□□□ -0.69
GNE-204ENST00000539208 IGLV7-43P04211 117 aa10.75□□□□□ -0.69
GNE-204ENST00000539208 TGP01266 2768 aa10.74□□□□□ -0.69
GNE-204ENST00000539208 NDUFB1O75438 58 aa10.73□□□□□ -0.69
GNE-204ENST00000539208 MOBPQ13875 183 aa10.73□□□□□ -0.69
GNE-204ENST00000539208 KRTAP21-3Q3LHN1 58 aa10.71□□□□□ -0.69
GNE-204ENST00000539208 MMP24-AS1A0A0U1RRL7 71 aa10.7□□□□□ -0.7
GNE-204ENST00000539208 KRTAP10-2P60368 255 aa10.7□□□□□ -0.7
GNE-204ENST00000539208 ANAPC11Q9NYG5 84 aa10.7□□□□□ -0.7
GNE-204ENST00000539208 DNAH8Q96JB1 4490 aa10.7□□□□□ -0.7
GNE-204ENST00000539208 MP68P56378 58 aa10.69□□□□□ -0.7
GNE-204ENST00000539208 HRCT1Q6UXD1 115 aa10.69□□□□□ -0.7
GNE-204ENST00000539208 Q5XG85 94 aa10.68□□□□□ -0.7
GNE-204ENST00000539208 CIRBP-AS1Q8TBR5 109 aa10.67□□□□□ -0.7
GNE-204ENST00000539208 H3BPC8 53 aa10.66□□□□□ -0.7
GNE-204ENST00000539208 ASB16-AS1Q495Z4 193 aa10.66□□□□□ -0.7
GNE-204ENST00000539208 SMIM26A0A096LP01 95 aa10.65□□□□□ -0.7
GNE-204ENST00000539208 hDV103S1A0JD37 113 aa10.65□□□□□ -0.71
GNE-204ENST00000539208 SVIPQ8NHG7 77 aa10.65□□□□□ -0.71
GNE-204ENST00000539208 Q6ZSA8 131 aa10.64□□□□□ -0.71
GNE-204ENST00000539208 H0Y9P7 68 aa10.62□□□□□ -0.71
GNE-204ENST00000539208 ALMS1Q8TCU4 4167 aa10.61□□□□□ -0.71
GNE-204ENST00000539208 FRAS1Q86XX4 4008 aa10.6□□□□□ -0.71
GNE-204ENST00000539208 TRAV22A0A0B4J277 110 aa10.6□□□□□ -0.71
GNE-204ENST00000539208 A0A1B0GVX0 72 aa10.6□□□□□ -0.71
GNE-204ENST00000539208 CD164Q04900 197 aa10.6□□□□□ -0.71
GNE-204ENST00000539208 LINC00208Q96KT6 92 aa10.6□□□□□ -0.71
GNE-204ENST00000539208 C8orf17Q9NRJ1 99 aa10.6□□□□□ -0.71
GNE-204ENST00000539208 SSBP3-AS1Q7Z2R9 100 aa10.6□□□□□ -0.71
GNE-204ENST00000539208 C4orf26Q17RF5 130 aa10.58□□□□□ -0.72
GNE-204ENST00000539208 CDK2AP2O75956 126 aa10.58□□□□□ -0.72
GNE-204ENST00000539208 KRTAP10-1P60331 282 aa10.58□□□□□ -0.72
GNE-204ENST00000539208 TP53AIP1Q9HCN2 124 aa10.58□□□□□ -0.72
GNE-204ENST00000539208 DNAH11Q96DT5 4516 aa10.57□□□□□ -0.72
GNE-204ENST00000539208 FP248Q71RG6 208 aaPredicted RBP10.57□□□□□ -0.72
GNE-204ENST00000539208 CYP4F30PQ9H0H9 118 aa10.57□□□□□ -0.72
GNE-204ENST00000539208 DNAH5Q8TE73 4624 aa10.57□□□□□ -0.72
GNE-204ENST00000539208 IGHV6-1A0A0B4J1U7 121 aa10.55□□□□□ -0.72
GNE-204ENST00000539208 C1orf64Q8NEQ6 169 aa10.53□□□□□ -0.72
GNE-204ENST00000539208 FAM229BQ4G0N7 80 aa10.51□□□□□ -0.73
GNE-204ENST00000539208 SPANXA2-OT1Q8N9U9 137 aa10.51□□□□□ -0.73
GNE-204ENST00000539208 PKD1P98161 4303 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms