RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 C2orf82Q6UX34 121 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 CAMK2N1Q7Z7J9 78 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 Q86TA4 180 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 Q8N814 137 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 C20orf203Q8NBC4 194 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 C7orf33Q8WU49 177 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 FAM104AQ969W3 186 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 IFI27L1Q96BM0 104 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 TXNDC17Q9BRA2 123 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 ICOSQ9Y6W8 199 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 MYCBP2O75592 4640 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 TNXBP22105 4242 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 LRP1Q07954 4544 aaKnown RBP1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 IGLV1-50A0A075B6I6 118 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 TRBV10-2A0A0K0K1G8 114 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 SDHAF1A6NFY7 115 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 LINC01549A6NIU2 74 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 LECT2O14960 151 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 SPINK4O60575 86 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 BCE1O60756 84 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 INSP01308 110 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 IGHV3-30-3P0DP02 117 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 MIFP14174 115 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 LINC00315P59091 139 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 UBE2D3P61077 147 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 UBE2D2P62837 147 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 KLKP1Q107X0 134 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 Q1RN00 199 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 SPINK13Q1W4C9 94 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 DEFB135Q30KP9 77 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 FAM229BQ4G0N7 80 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 CASC10Q5T4H9 136 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 Q6JHZ5 121 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 LYZL1Q6UWQ5 148 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 C1orf64Q8NEQ6 169 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 Q8TAT8 98 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 SMCR5Q8TEV8 140 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 TMEM263Q8WUH6 116 aaKnown RBP1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 CYP4F30PQ9H0H9 118 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 CDC42SE1Q9NRR8 79 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 TIMM8BQ9Y5J9 83 aaPredicted RBP1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 U3KQK5 164 aa1.16□□□□□ -2.22
CBX3P4-201ENST00000538909 IGKV3-7A0A075B6H7 116 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 TRBV7-3A0A075B6L6 115 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 TRBV25-1A0A075B6N4 114 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 TRAV22A0A0B4J277 110 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 C11orf86A6NJI1 115 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 D6R8Y8 96 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 H3BNG1 76 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 TLX1NBP0CAT3 122 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 ZNF22P17026 224 aaPredicted RBP1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 DEFB121Q5J5C9 76 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 ATP5EP2Q5VTU8 51 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 SDIM1Q6ZPB5 146 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 MUSTN1Q8IVN3 82 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 TMEM254Q8TBM7 123 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 CIRBP-AS1Q8TBR5 109 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 C16orf74Q96GX8 76 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 LINC01600Q96MT4 127 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 LIMD2Q9BT23 127 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 CHCHD7Q9BUK0 85 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 APLNQ9ULZ1 77 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 SNURFQ9Y675 71 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 ABCA13Q86UQ4 5058 aa1.15□□□□□ -2.23
CBX3P4-201ENST00000538909 PCLOQ9Y6V0 5065 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 TRAV23DV6A0A075B6W5 121 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 A0A096LPF7 62 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 TRAV12-3A0A0B4J271 114 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 TRAV21A0A0B4J279 112 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 IGKV3D-7A0A0C4DH55 119 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 A0A1B0GVX0 72 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 H7C2G1 150 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 BPY2O14599 106 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 ERC2-IT1O76042 136 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 DNAL4O96015 105 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 ARMS2P0C7Q2 107 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 ROMO1P60602 79 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 MIR22HGQ0VDD5 57 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 MOBPQ13875 183 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 Q6ZQT0 140 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 Q6ZTI0 123 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 MIR7-3HGQ8N6C7 128 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 MUC7Q8TAX7 377 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 PRR15LQ9BU68 103 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 C14orf132Q9NPU4 83 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 V9GYV3 84 aa1.14□□□□□ -2.23
CBX3P4-201ENST00000538909 IGLV2-18A0A075B6J9 118 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 TRAV10A0A0B4J240 114 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 TRBV10-1A0A0K0K1A3 114 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 TRBV6-5A0A0K0K1A5 114 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 LCE6AA0A183 80 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 TRBV6-4A0A1B0GX49 114 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 SMIM27A0A1W2PRY6 76 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 LINC01546A6NGU7 62 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 H3BPC8 53 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 K7EMI3 77 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 DEFB4AO15263 64 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 IGHV3-53P01767 116 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 SPART-AS1P0CW21 52 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms