RNA–Protein interactions for RNA: ENST00000538174.6

PTPRB-203, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best)

Gene PTPRB, Length 2,661 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-203ENST00000538174 CHKB-CPT1BH3BT56 60 aa4.43□□□□□ -1.7
PTPRB-203ENST00000538174 TLX1NBP0CAT3 122 aa4.43□□□□□ -1.7
PTPRB-203ENST00000538174 A0A096LPF7 62 aa4.42□□□□□ -1.7
PTPRB-203ENST00000538174 DEFB130BP0DP73 79 aa4.42□□□□□ -1.7
PTPRB-203ENST00000538174 DEFB130AP0DP74 79 aa4.42□□□□□ -1.7
PTPRB-203ENST00000538174 KMT2AQ03164 3969 aa4.42□□□□□ -1.7
PTPRB-203ENST00000538174 Q6ZTC4 211 aa4.42□□□□□ -1.7
PTPRB-203ENST00000538174 TOMM7Q9P0U1 55 aa4.42□□□□□ -1.7
PTPRB-203ENST00000538174 LINC01556Q5JQF7 62 aa4.41□□□□□ -1.7
PTPRB-203ENST00000538174 KRTAP26-1Q6PEX3 210 aa4.41□□□□□ -1.7
PTPRB-203ENST00000538174 CYP4F30PQ9H0H9 118 aa4.41□□□□□ -1.7
PTPRB-203ENST00000538174 IGLV5-37A0A075B6J1 123 aa4.41□□□□□ -1.7
PTPRB-203ENST00000538174 A0A087WYN8 130 aa4.41□□□□□ -1.7
PTPRB-203ENST00000538174 MOBPQ13875 183 aa4.41□□□□□ -1.7
PTPRB-203ENST00000538174 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
PTPRB-203ENST00000538174 DNAH2Q9P225 4427 aa4.41□□□□□ -1.7
PTPRB-203ENST00000538174 APLNQ9ULZ1 77 aa4.4□□□□□ -1.7
PTPRB-203ENST00000538174 LECT2O14960 151 aa4.4□□□□□ -1.71
PTPRB-203ENST00000538174 SPAG11BQ08648 103 aa4.4□□□□□ -1.71
PTPRB-203ENST00000538174 ASB16-AS1Q495Z4 193 aa4.4□□□□□ -1.71
PTPRB-203ENST00000538174 VPS13DQ5THJ4 4388 aa4.4□□□□□ -1.71
PTPRB-203ENST00000538174 ANGP03950 147 aaKnown RBP4.39□□□□□ -1.71
PTPRB-203ENST00000538174 C1orf134Q5TEV5 83 aa4.39□□□□□ -1.71
PTPRB-203ENST00000538174 ENHOQ6UWT2 76 aa4.39□□□□□ -1.71
PTPRB-203ENST00000538174 DNAH10OSP0CZ25 163 aa4.39□□□□□ -1.71
PTPRB-203ENST00000538174 Q6ZR54 194 aa4.39□□□□□ -1.71
PTPRB-203ENST00000538174 STAB2Q8WWQ8 2551 aa4.38□□□□□ -1.71
PTPRB-203ENST00000538174 ELOF1P60002 83 aaKnown RBP4.38□□□□□ -1.71
PTPRB-203ENST00000538174 RYR1P21817 5038 aa4.38□□□□□ -1.71
PTPRB-203ENST00000538174 DEFB135Q30KP9 77 aa4.38□□□□□ -1.71
PTPRB-203ENST00000538174 Q6ZQT0 140 aa4.37□□□□□ -1.71
PTPRB-203ENST00000538174 TRBV7-4A0A0J9YYF1 115 aa4.37□□□□□ -1.71
PTPRB-203ENST00000538174 ROMO1P60602 79 aa4.37□□□□□ -1.71
PTPRB-203ENST00000538174 A0A087X002 238 aa4.36□□□□□ -1.71
PTPRB-203ENST00000538174 LRCOL1A6NCL2 159 aa4.36□□□□□ -1.71
PTPRB-203ENST00000538174 RTL8CO15255 209 aa4.36□□□□□ -1.71
PTPRB-203ENST00000538174 UBL5Q9BZL1 73 aa4.36□□□□□ -1.71
PTPRB-203ENST00000538174 RPL37AP8A6NKH3 93 aa4.36□□□□□ -1.71
PTPRB-203ENST00000538174 KCNQ1DNQ9H478 68 aa4.36□□□□□ -1.71
PTPRB-203ENST00000538174 LINC00846Q9NV44 126 aa4.36□□□□□ -1.71
PTPRB-203ENST00000538174 C6orf48Q9UBA6 75 aa4.36□□□□□ -1.71
PTPRB-203ENST00000538174 A6NED7 52 aa4.35□□□□□ -1.71
PTPRB-203ENST00000538174 ERC2-IT1O76042 136 aa4.35□□□□□ -1.71
PTPRB-203ENST00000538174 TRAV10A0A0B4J240 114 aa4.35□□□□□ -1.71
PTPRB-203ENST00000538174 PSCAO43653 123 aa4.35□□□□□ -1.71
PTPRB-203ENST00000538174 LIMD2Q9BT23 127 aa4.35□□□□□ -1.71
PTPRB-203ENST00000538174 FRAS1Q86XX4 4008 aa4.35□□□□□ -1.71
PTPRB-203ENST00000538174 CSMD3Q7Z407 3707 aa4.34□□□□□ -1.71
PTPRB-203ENST00000538174 KRTAP29-1A8MX34 341 aaPredicted RBP4.34□□□□□ -1.71
PTPRB-203ENST00000538174 COX7BP24311 80 aa4.34□□□□□ -1.71
PTPRB-203ENST00000538174 UNQ6190/PRO20217Q6UXQ8 127 aa4.34□□□□□ -1.71
PTPRB-203ENST00000538174 C8orf17Q9NRJ1 99 aa4.34□□□□□ -1.71
PTPRB-203ENST00000538174 PKHD1P08F94 4074 aa4.34□□□□□ -1.71
PTPRB-203ENST00000538174 SPRR1AP35321 89 aa4.34□□□□□ -1.72
PTPRB-203ENST00000538174 KRTAP4-5Q9BYR2 181 aa4.34□□□□□ -1.72
PTPRB-203ENST00000538174 C14orf132Q9NPU4 83 aa4.34□□□□□ -1.72
PTPRB-203ENST00000538174 IGKV3OR2-268A0A0C4DH90 116 aa4.33□□□□□ -1.72
PTPRB-203ENST00000538174 DHRS4-AS1Q9P1J3 65 aa4.33□□□□□ -1.72
PTPRB-203ENST00000538174 CASC2Q6XLA1 102 aa4.33□□□□□ -1.72
PTPRB-203ENST00000538174 C15orf56Q8N910 161 aa4.33□□□□□ -1.72
PTPRB-203ENST00000538174 C1orf64Q8NEQ6 169 aa4.33□□□□□ -1.72
PTPRB-203ENST00000538174 TMEM254Q8TBM7 123 aa4.33□□□□□ -1.72
PTPRB-203ENST00000538174 KLK12Q9UKR0 248 aa4.33□□□□□ -1.72
PTPRB-203ENST00000538174 IGLV5-48A0A075B6I7 105 aa4.32□□□□□ -1.72
PTPRB-203ENST00000538174 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
PTPRB-203ENST00000538174 XAGE1AQ9HD64 81 aa4.32□□□□□ -1.72
PTPRB-203ENST00000538174 VPS13BQ7Z7G8 4022 aa4.32□□□□□ -1.72
PTPRB-203ENST00000538174 KIAA1109Q2LD37 5005 aa4.32□□□□□ -1.72
PTPRB-203ENST00000538174 IGLV5-52A0A0A0MRZ9 124 aa4.32□□□□□ -1.72
PTPRB-203ENST00000538174 C10orf25Q5T742 122 aa4.32□□□□□ -1.72
PTPRB-203ENST00000538174 NCR3O14931 201 aa4.31□□□□□ -1.72
PTPRB-203ENST00000538174 CAMK2N2Q96S95 79 aa4.31□□□□□ -1.72
PTPRB-203ENST00000538174 Q8NDZ9 215 aa4.31□□□□□ -1.72
PTPRB-203ENST00000538174 C9orf129Q5T035 196 aaKnown RBP4.3□□□□□ -1.72
PTPRB-203ENST00000538174 ABCA13Q86UQ4 5058 aa4.3□□□□□ -1.72
PTPRB-203ENST00000538174 A8MWP4 228 aa4.29□□□□□ -1.72
PTPRB-203ENST00000538174 KRTAP4-16G5E9R7 235 aaPredicted RBP4.29□□□□□ -1.72
PTPRB-203ENST00000538174 PRR15LQ9BU68 103 aa4.29□□□□□ -1.72
PTPRB-203ENST00000538174 LRP1BQ9NZR2 4599 aa4.29□□□□□ -1.72
PTPRB-203ENST00000538174 HSPG2P98160 4391 aa4.29□□□□□ -1.72
PTPRB-203ENST00000538174 DEFB131BA0A096LNP1 70 aa4.28□□□□□ -1.72
PTPRB-203ENST00000538174 LINC01547P58512 204 aaPredicted RBP4.28□□□□□ -1.72
PTPRB-203ENST00000538174 Q6ZQY7 126 aa4.28□□□□□ -1.72
PTPRB-203ENST00000538174 IGLV10-54A0A075B6I4 117 aa4.28□□□□□ -1.73
PTPRB-203ENST00000538174 CLPSL2Q6UWE3 100 aa4.28□□□□□ -1.73
PTPRB-203ENST00000538174 WFDC10BQ8IUB3 73 aa4.28□□□□□ -1.73
PTPRB-203ENST00000538174 IGLV8-61A0A075B6I0 122 aa4.27□□□□□ -1.73
PTPRB-203ENST00000538174 CNBPP62633 177 aaKnown RBP4.27□□□□□ -1.73
PTPRB-203ENST00000538174 LOC101927531A0A1B0GV80 90 aa4.27□□□□□ -1.73
PTPRB-203ENST00000538174 SLPIP03973 132 aa4.27□□□□□ -1.73
PTPRB-203ENST00000538174 C14orf177Q52M58 125 aa4.27□□□□□ -1.73
PTPRB-203ENST00000538174 SPRR4Q96PI1 79 aa4.27□□□□□ -1.73
PTPRB-203ENST00000538174 PKD1P98161 4303 aa4.26□□□□□ -1.73
PTPRB-203ENST00000538174 IGLV1-50A0A075B6I6 118 aa4.26□□□□□ -1.73
PTPRB-203ENST00000538174 Q8N9P0 234 aaPredicted RBP4.26□□□□□ -1.73
PTPRB-203ENST00000538174 Q6ZRX8 168 aa4.26□□□□□ -1.73
PTPRB-203ENST00000538174 HIGD2BQ4VC39 106 aa4.25□□□□□ -1.73
PTPRB-203ENST00000538174 DEFB4AO15263 64 aa4.25□□□□□ -1.73
PTPRB-203ENST00000538174 PRR4Q16378 134 aa4.25□□□□□ -1.73
PTPRB-203ENST00000538174 NREPQ16612 68 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms