RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 DHRS4-AS1Q9P1J3 65 aa7.1□□□□□ -1.27
CLSTN3-207ENST00000537408 RELNP78509 3460 aa7.09□□□□□ -1.27
CLSTN3-207ENST00000537408 SPAG11AQ6PDA7 123 aa7.09□□□□□ -1.28
CLSTN3-207ENST00000537408 C1orf134Q5TEV5 83 aa7.08□□□□□ -1.28
CLSTN3-207ENST00000537408 DEFB116Q30KQ4 102 aa7.07□□□□□ -1.28
CLSTN3-207ENST00000537408 FBN2P35556 2912 aa7.07□□□□□ -1.28
CLSTN3-207ENST00000537408 Q8N377 158 aa7.07□□□□□ -1.28
CLSTN3-207ENST00000537408 C6orf48Q9UBA6 75 aa7.07□□□□□ -1.28
CLSTN3-207ENST00000537408 X6R8D5 127 aa7.07□□□□□ -1.28
CLSTN3-207ENST00000537408 OTOGQ6ZRI0 2925 aa7.07□□□□□ -1.28
CLSTN3-207ENST00000537408 IGKV2-24A0A0C4DH68 120 aa7.07□□□□□ -1.28
CLSTN3-207ENST00000537408 PRR26Q8N8Z3 221 aa7.07□□□□□ -1.28
CLSTN3-207ENST00000537408 PRAC1Q96KF2 57 aa7.07□□□□□ -1.28
CLSTN3-207ENST00000537408 C14orf177Q52M58 125 aa7.06□□□□□ -1.28
CLSTN3-207ENST00000537408 SPRR4Q96PI1 79 aa7.05□□□□□ -1.28
CLSTN3-207ENST00000537408 HRNRQ86YZ3 2850 aaPredicted RBP7.05□□□□□ -1.28
CLSTN3-207ENST00000537408 IGLV7-46A0A075B6I9 117 aa7.03□□□□□ -1.28
CLSTN3-207ENST00000537408 CASC10Q5T4H9 136 aa7.02□□□□□ -1.29
CLSTN3-207ENST00000537408 Q8NAQ8 132 aa7.02□□□□□ -1.29
CLSTN3-207ENST00000537408 SPINK7P58062 85 aa7.02□□□□□ -1.29
CLSTN3-207ENST00000537408 ASB16-AS1Q495Z4 193 aa7.02□□□□□ -1.29
CLSTN3-207ENST00000537408 C9orf163Q8N9P6 203 aa7□□□□□ -1.29
CLSTN3-207ENST00000537408 MXRA5Q9NR99 2828 aa7□□□□□ -1.29
CLSTN3-207ENST00000537408 CSNK1G2-AS1Q8NCQ2 148 aa7□□□□□ -1.29
CLSTN3-207ENST00000537408 PLA2G1BP04054 148 aaKnown RBP7□□□□□ -1.29
CLSTN3-207ENST00000537408 GIG44P09565 113 aaPredicted RBP6.99□□□□□ -1.29
CLSTN3-207ENST00000537408 C7orf33Q8WU49 177 aa6.99□□□□□ -1.29
CLSTN3-207ENST00000537408 RETNLBQ9BQ08 111 aa6.98□□□□□ -1.29
CLSTN3-207ENST00000537408 PCOTHQ58A44 107 aa6.97□□□□□ -1.29
CLSTN3-207ENST00000537408 RPL37AP8A6NKH3 93 aa6.97□□□□□ -1.29
CLSTN3-207ENST00000537408 VPS13CQ709C8 3753 aa6.97□□□□□ -1.29
CLSTN3-207ENST00000537408 H3BNG1 76 aa6.96□□□□□ -1.3
CLSTN3-207ENST00000537408 Q6ZRX8 168 aa6.96□□□□□ -1.3
CLSTN3-207ENST00000537408 TNP2Q05952 138 aa6.96□□□□□ -1.3
CLSTN3-207ENST00000537408 PLAC8Q9NZF1 115 aa6.96□□□□□ -1.3
CLSTN3-207ENST00000537408 CNBPP62633 177 aaKnown RBP6.95□□□□□ -1.3
CLSTN3-207ENST00000537408 A0A096LNI7 61 aa6.95□□□□□ -1.3
CLSTN3-207ENST00000537408 LINC00476Q8WZB0 136 aa6.95□□□□□ -1.3
CLSTN3-207ENST00000537408 A0A087WSZ3 146 aa6.93□□□□□ -1.3
CLSTN3-207ENST00000537408 DMBT1Q9UGM3 2413 aaPredicted RBP6.93□□□□□ -1.3
CLSTN3-207ENST00000537408 A0A087X002 238 aa6.93□□□□□ -1.3
CLSTN3-207ENST00000537408 KRTAP29-1A8MX34 341 aaPredicted RBP6.93□□□□□ -1.3
CLSTN3-207ENST00000537408 NBDYA0A0U1RRE5 68 aa6.92□□□□□ -1.3
CLSTN3-207ENST00000537408 RPL37AP61513 92 aaKnown RBP6.91□□□□□ -1.3
CLSTN3-207ENST00000537408 PRR34Q9NV39 138 aa6.91□□□□□ -1.3
CLSTN3-207ENST00000537408 CELSR1Q9NYQ6 3014 aa6.91□□□□□ -1.3
CLSTN3-207ENST00000537408 ADM2Q7Z4H4 148 aa6.9□□□□□ -1.3
CLSTN3-207ENST00000537408 H0Y9J4 135 aa6.9□□□□□ -1.31
CLSTN3-207ENST00000537408 TP53AIP1Q9HCN2 124 aa6.89□□□□□ -1.31
CLSTN3-207ENST00000537408 A8MWP4 228 aa6.89□□□□□ -1.31
CLSTN3-207ENST00000537408 IGLV5-52A0A0A0MRZ9 124 aa6.88□□□□□ -1.31
CLSTN3-207ENST00000537408 APLNQ9ULZ1 77 aa6.87□□□□□ -1.31
CLSTN3-207ENST00000537408 IGLV1-50A0A075B6I6 118 aa6.87□□□□□ -1.31
CLSTN3-207ENST00000537408 LINC01556Q5JQF7 62 aa6.87□□□□□ -1.31
CLSTN3-207ENST00000537408 IGFL1Q6UW32 110 aa6.87□□□□□ -1.31
CLSTN3-207ENST00000537408 ZNF706Q9Y5V0 76 aaPredicted RBP6.87□□□□□ -1.31
CLSTN3-207ENST00000537408 IGLV5-37A0A075B6J1 123 aa6.86□□□□□ -1.31
CLSTN3-207ENST00000537408 NF1P21359 2839 aa6.86□□□□□ -1.31
CLSTN3-207ENST00000537408 HRES1P13985 223 aa6.85□□□□□ -1.31
CLSTN3-207ENST00000537408 NBPF19A0A087WUL8 3843 aa6.83□□□□□ -1.32
CLSTN3-207ENST00000537408 NBEAL2Q6ZNJ1 2754 aa6.82□□□□□ -1.32
CLSTN3-207ENST00000537408 CSAG1Q6PB30 78 aa6.82□□□□□ -1.32
CLSTN3-207ENST00000537408 REG3GQ6UW15 175 aa6.82□□□□□ -1.32
CLSTN3-207ENST00000537408 A0A1B0GU69 56 aa6.81□□□□□ -1.32
CLSTN3-207ENST00000537408 RTL8CO15255 209 aa6.81□□□□□ -1.32
CLSTN3-207ENST00000537408 FAM229AH3BQW9 127 aa6.8□□□□□ -1.32
CLSTN3-207ENST00000537408 PLA2G2DQ9UNK4 145 aa6.8□□□□□ -1.32
CLSTN3-207ENST00000537408 A0A0G2JQZ4 141 aa6.79□□□□□ -1.32
CLSTN3-207ENST00000537408 A0A1W2PNN7 141 aa6.79□□□□□ -1.32
CLSTN3-207ENST00000537408 SPRR1AP35321 89 aa6.79□□□□□ -1.32
CLSTN3-207ENST00000537408 C15orf56Q8N910 161 aa6.79□□□□□ -1.32
CLSTN3-207ENST00000537408 MIR22HGQ0VDD5 57 aa6.78□□□□□ -1.32
CLSTN3-207ENST00000537408 KRTAP4-16G5E9R7 235 aaPredicted RBP6.78□□□□□ -1.32
CLSTN3-207ENST00000537408 ACYP2P14621 99 aa6.78□□□□□ -1.32
CLSTN3-207ENST00000537408 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
CLSTN3-207ENST00000537408 UQCR11O14957 56 aa6.76□□□□□ -1.33
CLSTN3-207ENST00000537408 SPATA8Q6RVD6 105 aa6.76□□□□□ -1.33
CLSTN3-207ENST00000537408 STAB2Q8WWQ8 2551 aa6.76□□□□□ -1.33
CLSTN3-207ENST00000537408 IGLV8-61A0A075B6I0 122 aa6.76□□□□□ -1.33
CLSTN3-207ENST00000537408 IGLV9-49A0A0B4J1Y8 123 aa6.76□□□□□ -1.33
CLSTN3-207ENST00000537408 DNAH10OSP0CZ25 163 aa6.76□□□□□ -1.33
CLSTN3-207ENST00000537408 PRLHP81277 87 aa6.75□□□□□ -1.33
CLSTN3-207ENST00000537408 Q6ZR54 194 aa6.73□□□□□ -1.33
CLSTN3-207ENST00000537408 SPINK6Q6UWN8 80 aa6.73□□□□□ -1.33
CLSTN3-207ENST00000537408 LINC00472Q9H8W2 130 aa6.73□□□□□ -1.33
CLSTN3-207ENST00000537408 FBN3Q75N90 2809 aa6.72□□□□□ -1.33
CLSTN3-207ENST00000537408 TLX1NBP0CAT3 122 aa6.72□□□□□ -1.33
CLSTN3-207ENST00000537408 CSMD2Q7Z408 3487 aa6.71□□□□□ -1.34
CLSTN3-207ENST00000537408 FAM168BA1KXE4 195 aa6.7□□□□□ -1.34
CLSTN3-207ENST00000537408 KRTAP26-1Q6PEX3 210 aa6.69□□□□□ -1.34
CLSTN3-207ENST00000537408 C8orf17Q9NRJ1 99 aa6.68□□□□□ -1.34
CLSTN3-207ENST00000537408 A0A087WTM6 91 aa6.67□□□□□ -1.34
CLSTN3-207ENST00000537408 FBN1P35555 2871 aaKnown RBP6.67□□□□□ -1.34
CLSTN3-207ENST00000537408 IGHV6-1A0A0B4J1U7 121 aa6.66□□□□□ -1.34
CLSTN3-207ENST00000537408 J3QL48 77 aa6.65□□□□□ -1.34
CLSTN3-207ENST00000537408 TENM1Q9UKZ4 2725 aa6.65□□□□□ -1.34
CLSTN3-207ENST00000537408 MRPL34Q9BQ48 92 aaKnown RBP6.64□□□□□ -1.35
CLSTN3-207ENST00000537408 ROMO1P60602 79 aa6.63□□□□□ -1.35
CLSTN3-207ENST00000537408 AKAP9Q99996 3911 aa6.62□□□□□ -1.35
CLSTN3-207ENST00000537408 CIRBP-AS1Q8TBR5 109 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms