RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 COX7BP24311 80 aa7.8□□□□□ -1.16
SCARB1-204ENST00000535005 Q6ZSA8 131 aa7.8□□□□□ -1.16
SCARB1-204ENST00000535005 Q8NDZ9 215 aa7.8□□□□□ -1.16
SCARB1-204ENST00000535005 LRP1BQ9NZR2 4599 aa7.8□□□□□ -1.16
SCARB1-204ENST00000535005 NREPQ16612 68 aa7.79□□□□□ -1.16
SCARB1-204ENST00000535005 SPACA4Q8TDM5 124 aa7.79□□□□□ -1.16
SCARB1-204ENST00000535005 XAGE1AQ9HD64 81 aa7.79□□□□□ -1.16
SCARB1-204ENST00000535005 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.79□□□□□ -1.16
SCARB1-204ENST00000535005 IGKV2-24A0A0C4DH68 120 aa7.78□□□□□ -1.16
SCARB1-204ENST00000535005 PANO1I0J062 215 aa7.78□□□□□ -1.16
SCARB1-204ENST00000535005 CHTF8P0CG12 524 aa7.78□□□□□ -1.16
SCARB1-204ENST00000535005 ELOF1P60002 83 aaKnown RBP7.78□□□□□ -1.16
SCARB1-204ENST00000535005 PLA2G2DQ9UNK4 145 aa7.78□□□□□ -1.16
SCARB1-204ENST00000535005 A0A1B0GW54 56 aa7.78□□□□□ -1.16
SCARB1-204ENST00000535005 ZNF73O43830 326 aaPredicted RBP7.77□□□□□ -1.17
SCARB1-204ENST00000535005 TMEM254Q8TBM7 123 aa7.77□□□□□ -1.17
SCARB1-204ENST00000535005 FAM30AQ9NZY2 134 aa7.77□□□□□ -1.17
SCARB1-204ENST00000535005 SNURFQ9Y675 71 aa7.77□□□□□ -1.17
SCARB1-204ENST00000535005 BPY2O14599 106 aa7.76□□□□□ -1.17
SCARB1-204ENST00000535005 FP248Q71RG6 208 aaPredicted RBP7.76□□□□□ -1.17
SCARB1-204ENST00000535005 A0A1W2PNN7 141 aa7.75□□□□□ -1.17
SCARB1-204ENST00000535005 PLAC8Q9NZF1 115 aa7.75□□□□□ -1.17
SCARB1-204ENST00000535005 IGLV5-37A0A075B6J1 123 aa7.74□□□□□ -1.17
SCARB1-204ENST00000535005 KRTAP7-1Q8IUC3 87 aa7.74□□□□□ -1.17
SCARB1-204ENST00000535005 EPPK1P58107 5090 aaKnown RBP7.74□□□□□ -1.17
SCARB1-204ENST00000535005 VPREB1P12018 145 aa7.73□□□□□ -1.17
SCARB1-204ENST00000535005 SERTAD4-AS1Q5TG53 156 aa7.73□□□□□ -1.17
SCARB1-204ENST00000535005 FAM168BA1KXE4 195 aa7.73□□□□□ -1.17
SCARB1-204ENST00000535005 M0R378 163 aa7.73□□□□□ -1.17
SCARB1-204ENST00000535005 A0A0U1RQV1 116 aa7.72□□□□□ -1.17
SCARB1-204ENST00000535005 PRYO14603 147 aa7.72□□□□□ -1.17
SCARB1-204ENST00000535005 SCXQ7RTU7 201 aa7.71□□□□□ -1.17
SCARB1-204ENST00000535005 CIRBP-AS1Q8TBR5 109 aa7.71□□□□□ -1.17
SCARB1-204ENST00000535005 OCR1Q9BZK8 76 aa7.71□□□□□ -1.17
SCARB1-204ENST00000535005 APOBP04114 4563 aaKnown RBP7.71□□□□□ -1.17
SCARB1-204ENST00000535005 IGKV4-1P06312 121 aa7.71□□□□□ -1.18
SCARB1-204ENST00000535005 LINC00528Q8N1L1 170 aa7.71□□□□□ -1.18
SCARB1-204ENST00000535005 NKAPP1Q8N9T2 125 aa7.68□□□□□ -1.18
SCARB1-204ENST00000535005 MRPL55Q7Z7F7 128 aaKnown RBP7.68□□□□□ -1.18
SCARB1-204ENST00000535005 CDK2AP2O75956 126 aa7.67□□□□□ -1.18
SCARB1-204ENST00000535005 C7orf33Q8WU49 177 aa7.67□□□□□ -1.18
SCARB1-204ENST00000535005 PHF5AQ7RTV0 110 aaKnown RBP7.66□□□□□ -1.18
SCARB1-204ENST00000535005 IGLV5-48A0A075B6I7 105 aa7.64□□□□□ -1.19
SCARB1-204ENST00000535005 IGLV1-50A0A075B6I6 118 aa7.63□□□□□ -1.19
SCARB1-204ENST00000535005 RYR1P21817 5038 aa7.62□□□□□ -1.19
SCARB1-204ENST00000535005 BIRC6Q9NR09 4857 aa7.61□□□□□ -1.19
SCARB1-204ENST00000535005 RPL37AP8A6NKH3 93 aa7.61□□□□□ -1.19
SCARB1-204ENST00000535005 UBE2BP63146 152 aa7.61□□□□□ -1.19
SCARB1-204ENST00000535005 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
SCARB1-204ENST00000535005 KCNQ1DNQ9H478 68 aa7.61□□□□□ -1.19
SCARB1-204ENST00000535005 DHRS4-AS1Q9P1J3 65 aa7.61□□□□□ -1.19
SCARB1-204ENST00000535005 BRK1Q8WUW1 75 aa7.6□□□□□ -1.19
SCARB1-204ENST00000535005 HSPG2P98160 4391 aa7.6□□□□□ -1.19
SCARB1-204ENST00000535005 KIAA1109Q2LD37 5005 aa7.6□□□□□ -1.19
SCARB1-204ENST00000535005 hDV103S1A0JD37 113 aa7.57□□□□□ -1.2
SCARB1-204ENST00000535005 SPRR1AP35321 89 aa7.57□□□□□ -1.2
SCARB1-204ENST00000535005 Q1T7F1 81 aa7.57□□□□□ -1.2
SCARB1-204ENST00000535005 C1orf195Q5TG92 126 aa7.57□□□□□ -1.2
SCARB1-204ENST00000535005 PSORS1C2Q9UIG4 136 aa7.57□□□□□ -1.2
SCARB1-204ENST00000535005 REG3GQ6UW15 175 aa7.57□□□□□ -1.2
SCARB1-204ENST00000535005 Q8N9L7 120 aa7.57□□□□□ -1.2
SCARB1-204ENST00000535005 FAT1Q14517 4588 aa7.56□□□□□ -1.2
SCARB1-204ENST00000535005 SMR3BP02814 79 aaPredicted RBP7.56□□□□□ -1.2
SCARB1-204ENST00000535005 FAM229BQ4G0N7 80 aa7.56□□□□□ -1.2
SCARB1-204ENST00000535005 ZCCHC13Q8WW36 166 aaKnown RBP7.56□□□□□ -1.2
SCARB1-204ENST00000535005 HIGD2AQ9BW72 106 aa7.56□□□□□ -1.2
SCARB1-204ENST00000535005 Q8N377 158 aa7.55□□□□□ -1.2
SCARB1-204ENST00000535005 CYP4F30PQ9H0H9 118 aa7.55□□□□□ -1.2
SCARB1-204ENST00000535005 ETDCA0A1B0GVM5 59 aa7.55□□□□□ -1.2
SCARB1-204ENST00000535005 KRTAP4-16G5E9R7 235 aaPredicted RBP7.55□□□□□ -1.2
SCARB1-204ENST00000535005 Q8NBF4 154 aa7.55□□□□□ -1.2
SCARB1-204ENST00000535005 SPRR4Q96PI1 79 aa7.55□□□□□ -1.2
SCARB1-204ENST00000535005 NDUFB1O75438 58 aa7.54□□□□□ -1.2
SCARB1-204ENST00000535005 SMIM29Q86T20 159 aa7.54□□□□□ -1.2
SCARB1-204ENST00000535005 PRR15Q8IV56 129 aa7.54□□□□□ -1.2
SCARB1-204ENST00000535005 MPLKIPQ8TAP9 179 aa7.54□□□□□ -1.2
SCARB1-204ENST00000535005 RPL37AP61513 92 aaKnown RBP7.53□□□□□ -1.2
SCARB1-204ENST00000535005 V9GYY9 64 aa7.53□□□□□ -1.2
SCARB1-204ENST00000535005 C1orf137Q5JT78 98 aa7.52□□□□□ -1.2
SCARB1-204ENST00000535005 Q6ZRX8 168 aa7.52□□□□□ -1.2
SCARB1-204ENST00000535005 VPS13BQ7Z7G8 4022 aa7.52□□□□□ -1.21
SCARB1-204ENST00000535005 FAM229AH3BQW9 127 aa7.52□□□□□ -1.21
SCARB1-204ENST00000535005 H0Y9J4 135 aa7.51□□□□□ -1.21
SCARB1-204ENST00000535005 KRTAP10-4P60372 401 aaPredicted RBP7.51□□□□□ -1.21
SCARB1-204ENST00000535005 A0A1W2PNM2 257 aa7.5□□□□□ -1.21
SCARB1-204ENST00000535005 IGLV7-43P04211 117 aa7.5□□□□□ -1.21
SCARB1-204ENST00000535005 KRTAP13-1Q8IUC0 172 aa7.5□□□□□ -1.21
SCARB1-204ENST00000535005 Q8N1X5 172 aa7.5□□□□□ -1.21
SCARB1-204ENST00000535005 PLA2G1BP04054 148 aaKnown RBP7.5□□□□□ -1.21
SCARB1-204ENST00000535005 KRTAP17-1Q9BYP8 105 aa7.48□□□□□ -1.21
SCARB1-204ENST00000535005 ZNF861PO60384 105 aa7.48□□□□□ -1.21
SCARB1-204ENST00000535005 UBE2AP49459 152 aa7.48□□□□□ -1.21
SCARB1-204ENST00000535005 Q5VSD8 79 aa7.48□□□□□ -1.21
SCARB1-204ENST00000535005 C1orf64Q8NEQ6 169 aa7.48□□□□□ -1.21
SCARB1-204ENST00000535005 SRRM2Q9UQ35 2752 aaKnown RBP7.47□□□□□ -1.21
SCARB1-204ENST00000535005 DSCR10P59022 87 aa7.47□□□□□ -1.21
SCARB1-204ENST00000535005 DEFB105AQ8NG35 78 aa7.47□□□□□ -1.21
SCARB1-204ENST00000535005 HERC2O95714 4834 aa7.47□□□□□ -1.21
SCARB1-204ENST00000535005 HCG22E2RYF7 251 aa7.46□□□□□ -1.21
SCARB1-204ENST00000535005 H3BPC8 53 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms