RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 PPLO60437 1756 aa-0.69□□□□□ -2.52
BRCA2-205ENST00000533776 MYMXA0A1B0GTQ4 84 aa-0.69□□□□□ -2.52
BRCA2-205ENST00000533776 KALRNO60229 2985 aa-0.69□□□□□ -2.52
BRCA2-205ENST00000533776 DIP2BQ9P265 1576 aa-0.7□□□□□ -2.52
BRCA2-205ENST00000533776 FASNP49327 2511 aaKnown RBP-0.7□□□□□ -2.52
BRCA2-205ENST00000533776 KIF14Q15058 1648 aa-0.7□□□□□ -2.52
BRCA2-205ENST00000533776 H0YAA0 97 aa-0.7□□□□□ -2.52
BRCA2-205ENST00000533776 K7EP34 96 aa-0.7□□□□□ -2.52
BRCA2-205ENST00000533776 PEA15Q15121 130 aa-0.7□□□□□ -2.52
BRCA2-205ENST00000533776 NCOA2Q15596 1464 aa-0.7□□□□□ -2.52
BRCA2-205ENST00000533776 MAGI3Q5TCQ9 1506 aa-0.7□□□□□ -2.52
BRCA2-205ENST00000533776 ARFGEF2Q9Y6D5 1785 aa-0.7□□□□□ -2.52
BRCA2-205ENST00000533776 LCE6AA0A183 80 aa-0.71□□□□□ -2.52
BRCA2-205ENST00000533776 TDRG1Q3Y452 100 aa-0.71□□□□□ -2.52
BRCA2-205ENST00000533776 PYY3Q5JQD4 70 aa-0.71□□□□□ -2.52
BRCA2-205ENST00000533776 DNAH11Q96DT5 4516 aa-0.71□□□□□ -2.52
BRCA2-205ENST00000533776 MYO18BQ8IUG5 2567 aa-0.71□□□□□ -2.52
BRCA2-205ENST00000533776 PLIN4Q96Q06 1357 aa-0.71□□□□□ -2.52
BRCA2-205ENST00000533776 MAP3K4Q9Y6R4 1608 aa-0.71□□□□□ -2.52
BRCA2-205ENST00000533776 ANKRD11Q6UB99 2663 aaPredicted RBP-0.72□□□□□ -2.52
BRCA2-205ENST00000533776 H0YGG7 62 aa-0.72□□□□□ -2.52
BRCA2-205ENST00000533776 RABAC1Q9UI14 185 aa-0.72□□□□□ -2.52
BRCA2-205ENST00000533776 SACSQ9NZJ4 4579 aa-0.73□□□□□ -2.53
BRCA2-205ENST00000533776 GCN1Q92616 2671 aaKnown RBP-0.73□□□□□ -2.53
BRCA2-205ENST00000533776 PIK3C2BO00750 1634 aa-0.73□□□□□ -2.53
BRCA2-205ENST00000533776 SMIM11AP58511 58 aa-0.73□□□□□ -2.53
BRCA2-205ENST00000533776 LINC00643Q86TS7 51 aa-0.73□□□□□ -2.53
BRCA2-205ENST00000533776 MAP3K1Q13233 1512 aa-0.74□□□□□ -2.53
BRCA2-205ENST00000533776 DNAH1Q9P2D7 4330 aa-0.74□□□□□ -2.53
BRCA2-205ENST00000533776 SNRPFP62306 86 aaKnown RBP-0.74□□□□□ -2.53
BRCA2-205ENST00000533776 WFDC9Q8NEX5 89 aa-0.74□□□□□ -2.53
BRCA2-205ENST00000533776 S100A16Q96FQ6 103 aaKnown RBP-0.74□□□□□ -2.53
BRCA2-205ENST00000533776 PLECQ15149 4684 aaKnown RBP-0.74□□□□□ -2.53
BRCA2-205ENST00000533776 DEPDC5O75140 1603 aa-0.75□□□□□ -2.53
BRCA2-205ENST00000533776 CEBPZOSA8MTT3 80 aa-0.75□□□□□ -2.53
BRCA2-205ENST00000533776 H3BNG1 76 aa-0.75□□□□□ -2.53
BRCA2-205ENST00000533776 CYB5AP00167 134 aa-0.75□□□□□ -2.53
BRCA2-205ENST00000533776 LINC00158P58513 81 aa-0.75□□□□□ -2.53
BRCA2-205ENST00000533776 RPL38P63173 70 aaKnown RBP-0.75□□□□□ -2.53
BRCA2-205ENST00000533776 PRO3102Q9H379 93 aa-0.75□□□□□ -2.53
BRCA2-205ENST00000533776 URB2Q14146 1524 aaKnown RBP-0.75□□□□□ -2.53
BRCA2-205ENST00000533776 PLCH1Q4KWH8 1693 aa-0.75□□□□□ -2.53
BRCA2-205ENST00000533776 PVALEFA0A1B0GWK0 134 aa-0.76□□□□□ -2.53
BRCA2-205ENST00000533776 C9orf92A6NGG3 77 aa-0.76□□□□□ -2.53
BRCA2-205ENST00000533776 LYNX1G3V0Z9 82 aa-0.76□□□□□ -2.53
BRCA2-205ENST00000533776 IFI6P09912 130 aa-0.76□□□□□ -2.53
BRCA2-205ENST00000533776 C3orf79P0CE67 100 aa-0.76□□□□□ -2.53
BRCA2-205ENST00000533776 V9GYS6 101 aa-0.76□□□□□ -2.53
BRCA2-205ENST00000533776 USP9XQ93008 2570 aaPredicted RBP-0.76□□□□□ -2.53
BRCA2-205ENST00000533776 TEX15Q9BXT5 2789 aa-0.76□□□□□ -2.53
BRCA2-205ENST00000533776 TRIOO75962 3097 aa-0.76□□□□□ -2.53
BRCA2-205ENST00000533776 SPENQ96T58 3664 aaKnown RBP-0.76□□□□□ -2.53
BRCA2-205ENST00000533776 NIPBLQ6KC79 2804 aaeCLIP-0.77□□□□□ -2.53
BRCA2-205ENST00000533776 RELNP78509 3460 aa-0.77□□□□□ -2.53
BRCA2-205ENST00000533776 RANBP2P49792 3224 aaKnown RBP-0.77□□□□□ -2.53
BRCA2-205ENST00000533776 A0A0C4DFX4 3053 aa-0.78□□□□□ -2.53
BRCA2-205ENST00000533776 DDX60LQ5H9U9 1706 aaKnown RBP-0.78□□□□□ -2.53
BRCA2-205ENST00000533776 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.78□□□□□ -2.53
BRCA2-205ENST00000533776 LAMA3Q16787 3333 aa-0.78□□□□□ -2.53
BRCA2-205ENST00000533776 TJP1Q07157 1748 aa-0.78□□□□□ -2.53
BRCA2-205ENST00000533776 RICTORQ6R327 1708 aa-0.78□□□□□ -2.53
BRCA2-205ENST00000533776 NBEAQ8NFP9 2946 aa-0.78□□□□□ -2.54
BRCA2-205ENST00000533776 WDR87Q6ZQQ6 2873 aa-0.78□□□□□ -2.54
BRCA2-205ENST00000533776 CCDC88BA6NC98 1476 aa-0.79□□□□□ -2.54
BRCA2-205ENST00000533776 NDUFB1O75438 58 aa-0.79□□□□□ -2.54
BRCA2-205ENST00000533776 DEFB130BP0DP73 79 aa-0.79□□□□□ -2.54
BRCA2-205ENST00000533776 DEFB130AP0DP74 79 aa-0.79□□□□□ -2.54
BRCA2-205ENST00000533776 HMGA1P17096 107 aaKnown RBP-0.79□□□□□ -2.54
BRCA2-205ENST00000533776 PRLHP81277 87 aa-0.79□□□□□ -2.54
BRCA2-205ENST00000533776 Q9H521 79 aa-0.79□□□□□ -2.54
BRCA2-205ENST00000533776 CMYA5Q8N3K9 4069 aa-0.79□□□□□ -2.54
BRCA2-205ENST00000533776 CFAP43Q8NDM7 1665 aa-0.79□□□□□ -2.54
BRCA2-205ENST00000533776 RNF17Q9BXT8 1623 aaKnown RBP-0.79□□□□□ -2.54
BRCA2-205ENST00000533776 DNAH7Q8WXX0 4024 aa-0.8□□□□□ -2.54
BRCA2-205ENST00000533776 MED14O60244 1454 aa-0.8□□□□□ -2.54
BRCA2-205ENST00000533776 NBEAL2Q6ZNJ1 2754 aa-0.8□□□□□ -2.54
BRCA2-205ENST00000533776 ACYP1P07311 99 aa-0.8□□□□□ -2.54
BRCA2-205ENST00000533776 DEFB121Q5J5C9 76 aa-0.8□□□□□ -2.54
BRCA2-205ENST00000533776 COL6A5A8TX70 2615 aa-0.8□□□□□ -2.54
BRCA2-205ENST00000533776 MTORP42345 2549 aa-0.8□□□□□ -2.54
BRCA2-205ENST00000533776 CD163L1Q9NR16 1453 aa-0.8□□□□□ -2.54
BRCA2-205ENST00000533776 COL12A1Q99715 3063 aa-0.8□□□□□ -2.54
BRCA2-205ENST00000533776 SPTBN5Q9NRC6 3674 aaKnown RBP-0.8□□□□□ -2.54
BRCA2-205ENST00000533776 ITSN1Q15811 1721 aa-0.81□□□□□ -2.54
BRCA2-205ENST00000533776 ZC3H13Q5T200 1668 aaKnown RBP-0.81□□□□□ -2.54
BRCA2-205ENST00000533776 UMAD1C9J7I0 102 aa-0.81□□□□□ -2.54
BRCA2-205ENST00000533776 DEFA5Q01523 94 aa-0.81□□□□□ -2.54
BRCA2-205ENST00000533776 FAM186AA6NE01 2351 aa-0.82□□□□□ -2.54
BRCA2-205ENST00000533776 DNAH8Q96JB1 4490 aa-0.82□□□□□ -2.54
BRCA2-205ENST00000533776 LRRK2Q5S007 2527 aa-0.82□□□□□ -2.54
BRCA2-205ENST00000533776 CEP290O15078 2479 aa-0.82□□□□□ -2.54
BRCA2-205ENST00000533776 NDUFA4O00483 81 aa-0.82□□□□□ -2.54
BRCA2-205ENST00000533776 KRTAP19-5Q3LI72 72 aa-0.82□□□□□ -2.54
BRCA2-205ENST00000533776 S4R3F8 94 aa-0.82□□□□□ -2.54
BRCA2-205ENST00000533776 CELSR3Q9NYQ7 3312 aa-0.82□□□□□ -2.54
BRCA2-205ENST00000533776 DYNC1H1Q14204 4646 aaKnown RBP-0.82□□□□□ -2.54
BRCA2-205ENST00000533776 UACAQ9BZF9 1416 aa-0.82□□□□□ -2.54
BRCA2-205ENST00000533776 ANKRD50Q9ULJ7 1429 aa-0.82□□□□□ -2.54
BRCA2-205ENST00000533776 UTP20O75691 2785 aaKnown RBP-0.83□□□□□ -2.54
BRCA2-205ENST00000533776 MGAM2Q2M2H8 2515 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms