RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 LINC00474Q9P2X8 69 aa12.07□□□□□ -0.48
UBXN1-215ENST00000533476 H0Y9J4 135 aa12.06□□□□□ -0.48
UBXN1-215ENST00000533476 OXTP01178 125 aa12.06□□□□□ -0.48
UBXN1-215ENST00000533476 KRTAP11-1Q8IUC1 163 aa12.06□□□□□ -0.48
UBXN1-215ENST00000533476 TENM2Q9NT68 2774 aa12.06□□□□□ -0.48
UBXN1-215ENST00000533476 PLECQ15149 4684 aaKnown RBP12.06□□□□□ -0.48
UBXN1-215ENST00000533476 LINC00476Q8WZB0 136 aa12.05□□□□□ -0.48
UBXN1-215ENST00000533476 HIGD2AQ9BW72 106 aa12.05□□□□□ -0.48
UBXN1-215ENST00000533476 Q8N9L7 120 aa12.05□□□□□ -0.48
UBXN1-215ENST00000533476 EPM2AB3EWF7 344 aa12.04□□□□□ -0.48
UBXN1-215ENST00000533476 OCR1Q9BZK8 76 aa12.03□□□□□ -0.48
UBXN1-215ENST00000533476 SNURFQ9Y675 71 aa12.03□□□□□ -0.48
UBXN1-215ENST00000533476 IGLV8-61A0A075B6I0 122 aa12.03□□□□□ -0.48
UBXN1-215ENST00000533476 SERP1Q9Y6X1 66 aa12.03□□□□□ -0.48
UBXN1-215ENST00000533476 ATP5EP56381 51 aaPredicted RBP12□□□□□ -0.49
UBXN1-215ENST00000533476 TMEM254Q8TBM7 123 aa12□□□□□ -0.49
UBXN1-215ENST00000533476 IGFL1Q6UW32 110 aa11.99□□□□□ -0.49
UBXN1-215ENST00000533476 PANO1I0J062 215 aa11.99□□□□□ -0.49
UBXN1-215ENST00000533476 SPRR1BP22528 89 aa11.98□□□□□ -0.49
UBXN1-215ENST00000533476 UBE2AP49459 152 aa11.97□□□□□ -0.49
UBXN1-215ENST00000533476 SPACA4Q8TDM5 124 aa11.96□□□□□ -0.49
UBXN1-215ENST00000533476 VPS13DQ5THJ4 4388 aa11.96□□□□□ -0.5
UBXN1-215ENST00000533476 A0A087WTM6 91 aa11.96□□□□□ -0.5
UBXN1-215ENST00000533476 A0A0U1RQV1 116 aa11.95□□□□□ -0.5
UBXN1-215ENST00000533476 STARD9Q9P2P6 4700 aa11.94□□□□□ -0.5
UBXN1-215ENST00000533476 A0A0G2JQZ4 141 aa11.93□□□□□ -0.5
UBXN1-215ENST00000533476 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.93□□□□□ -0.5
UBXN1-215ENST00000533476 DSCR10P59022 87 aa11.92□□□□□ -0.5
UBXN1-215ENST00000533476 Q6ZR54 194 aa11.92□□□□□ -0.5
UBXN1-215ENST00000533476 KRTAP13-1Q8IUC0 172 aa11.92□□□□□ -0.5
UBXN1-215ENST00000533476 Q5XG85 94 aa11.92□□□□□ -0.5
UBXN1-215ENST00000533476 LCE6AA0A183 80 aa11.9□□□□□ -0.5
UBXN1-215ENST00000533476 C5orf47Q569G3 176 aa11.9□□□□□ -0.51
UBXN1-215ENST00000533476 RTL8CO15255 209 aa11.86□□□□□ -0.51
UBXN1-215ENST00000533476 A0A087WSZ3 146 aa11.86□□□□□ -0.51
UBXN1-215ENST00000533476 K7EQZ3 153 aa11.85□□□□□ -0.51
UBXN1-215ENST00000533476 SMIM26A0A096LP01 95 aa11.82□□□□□ -0.52
UBXN1-215ENST00000533476 FAM30AQ9NZY2 134 aa11.82□□□□□ -0.52
UBXN1-215ENST00000533476 C4orf26Q17RF5 130 aa11.81□□□□□ -0.52
UBXN1-215ENST00000533476 HCG22E2RYF7 251 aa11.8□□□□□ -0.52
UBXN1-215ENST00000533476 C1orf134Q5TEV5 83 aa11.78□□□□□ -0.52
UBXN1-215ENST00000533476 PLAC8Q9NZF1 115 aa11.78□□□□□ -0.52
UBXN1-215ENST00000533476 WWC2-AS2Q96NR7 200 aa11.78□□□□□ -0.52
UBXN1-215ENST00000533476 SRRM2Q9UQ35 2752 aaKnown RBP11.76□□□□□ -0.53
UBXN1-215ENST00000533476 HECTD4Q9Y4D8 3996 aa11.76□□□□□ -0.53
UBXN1-215ENST00000533476 ZCCHC13Q8WW36 166 aaKnown RBP11.76□□□□□ -0.53
UBXN1-215ENST00000533476 IGLV5-52A0A0A0MRZ9 124 aa11.75□□□□□ -0.53
UBXN1-215ENST00000533476 DEFB116Q30KQ4 102 aa11.75□□□□□ -0.53
UBXN1-215ENST00000533476 LINC00483Q53H64 154 aa11.74□□□□□ -0.53
UBXN1-215ENST00000533476 HRCT1Q6UXD1 115 aa11.73□□□□□ -0.53
UBXN1-215ENST00000533476 PSORS1C2Q9UIG4 136 aa11.73□□□□□ -0.53
UBXN1-215ENST00000533476 ZNF706Q9Y5V0 76 aaPredicted RBP11.72□□□□□ -0.53
UBXN1-215ENST00000533476 FP248Q71RG6 208 aaPredicted RBP11.71□□□□□ -0.53
UBXN1-215ENST00000533476 DNAH17Q9UFH2 4485 aa11.71□□□□□ -0.53
UBXN1-215ENST00000533476 LINC00472Q9H8W2 130 aa11.7□□□□□ -0.54
UBXN1-215ENST00000533476 LY6G6CO95867 125 aa11.7□□□□□ -0.54
UBXN1-215ENST00000533476 KMT2AQ03164 3969 aa11.69□□□□□ -0.54
UBXN1-215ENST00000533476 DNAH2Q9P225 4427 aa11.69□□□□□ -0.54
UBXN1-215ENST00000533476 RPL37AP61513 92 aaKnown RBP11.69□□□□□ -0.54
UBXN1-215ENST00000533476 IGLV9-49A0A0B4J1Y8 123 aa11.67□□□□□ -0.54
UBXN1-215ENST00000533476 KRTAP29-1A8MX34 341 aaPredicted RBP11.66□□□□□ -0.54
UBXN1-215ENST00000533476 A8MWP4 228 aa11.66□□□□□ -0.54
UBXN1-215ENST00000533476 ZNF861PO60384 105 aa11.66□□□□□ -0.54
UBXN1-215ENST00000533476 PRR15Q8IV56 129 aa11.65□□□□□ -0.54
UBXN1-215ENST00000533476 WFDC13Q8IUB5 93 aa11.63□□□□□ -0.55
UBXN1-215ENST00000533476 DNAH6Q9C0G6 4158 aa11.61□□□□□ -0.55
UBXN1-215ENST00000533476 NDUFB1O75438 58 aa11.6□□□□□ -0.55
UBXN1-215ENST00000533476 MP68P56378 58 aa11.6□□□□□ -0.55
UBXN1-215ENST00000533476 H3BPC8 53 aa11.58□□□□□ -0.55
UBXN1-215ENST00000533476 CASC2Q6XLA1 102 aa11.58□□□□□ -0.56
UBXN1-215ENST00000533476 CYP4F30PQ9H0H9 118 aa11.58□□□□□ -0.56
UBXN1-215ENST00000533476 KMT2CQ8NEZ4 4911 aaKnown RBP11.58□□□□□ -0.56
UBXN1-215ENST00000533476 hDV103S1A0JD37 113 aa11.57□□□□□ -0.56
UBXN1-215ENST00000533476 MOBPQ13875 183 aa11.57□□□□□ -0.56
UBXN1-215ENST00000533476 FAM229BQ4G0N7 80 aa11.56□□□□□ -0.56
UBXN1-215ENST00000533476 Q96NJ1 140 aa11.56□□□□□ -0.56
UBXN1-215ENST00000533476 IGLV7-43P04211 117 aa11.56□□□□□ -0.56
UBXN1-215ENST00000533476 DNAH8Q96JB1 4490 aa11.53□□□□□ -0.56
UBXN1-215ENST00000533476 KRTAP10-2P60368 255 aa11.53□□□□□ -0.56
UBXN1-215ENST00000533476 ANAPC11Q9NYG5 84 aa11.53□□□□□ -0.56
UBXN1-215ENST00000533476 TRAV22A0A0B4J277 110 aa11.52□□□□□ -0.57
UBXN1-215ENST00000533476 HYDINQ4G0P3 5121 aa11.52□□□□□ -0.57
UBXN1-215ENST00000533476 MMP24-AS1A0A0U1RRL7 71 aa11.51□□□□□ -0.57
UBXN1-215ENST00000533476 ALMS1Q8TCU4 4167 aa11.51□□□□□ -0.57
UBXN1-215ENST00000533476 C1orf64Q8NEQ6 169 aa11.5□□□□□ -0.57
UBXN1-215ENST00000533476 SACSQ9NZJ4 4579 aa11.49□□□□□ -0.57
UBXN1-215ENST00000533476 CIRBP-AS1Q8TBR5 109 aa11.49□□□□□ -0.57
UBXN1-215ENST00000533476 LINC00336Q6ZUF6 198 aa11.48□□□□□ -0.57
UBXN1-215ENST00000533476 H0Y9P7 68 aa11.48□□□□□ -0.57
UBXN1-215ENST00000533476 LINC00208Q96KT6 92 aa11.48□□□□□ -0.57
UBXN1-215ENST00000533476 SPANXA2-OT1Q8N9U9 137 aa11.47□□□□□ -0.57
UBXN1-215ENST00000533476 PRO0628Q9UI54 55 aa11.46□□□□□ -0.58
UBXN1-215ENST00000533476 Q6ZSA8 131 aa11.45□□□□□ -0.58
UBXN1-215ENST00000533476 FRAS1Q86XX4 4008 aa11.44□□□□□ -0.58
UBXN1-215ENST00000533476 ASB16-AS1Q495Z4 193 aa11.44□□□□□ -0.58
UBXN1-215ENST00000533476 MPLKIPQ8TAP9 179 aa11.44□□□□□ -0.58
UBXN1-215ENST00000533476 Q1T7F1 81 aa11.42□□□□□ -0.58
UBXN1-215ENST00000533476 DNAH11Q96DT5 4516 aa11.41□□□□□ -0.58
UBXN1-215ENST00000533476 C8orf17Q9NRJ1 99 aa11.41□□□□□ -0.58
UBXN1-215ENST00000533476 A0A1B0GVX0 72 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms