RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 A0A1B0GV72 72 aa13.3□□□□□ -0.28
PACSIN3-209ENST00000532457 C3orf22Q8N5N4 141 aa13.29□□□□□ -0.28
PACSIN3-209ENST00000532457 OBSCN-AS1Q96MR7 158 aa13.28□□□□□ -0.28
PACSIN3-209ENST00000532457 SMIM29Q86T20 159 aa13.27□□□□□ -0.29
PACSIN3-209ENST00000532457 H3BQ85 93 aa13.26□□□□□ -0.29
PACSIN3-209ENST00000532457 NDUFV3P56181 108 aaKnown RBP13.25□□□□□ -0.29
PACSIN3-209ENST00000532457 GAGE2AQ6NT46 116 aa13.25□□□□□ -0.29
PACSIN3-209ENST00000532457 KRTAP17-1Q9BYP8 105 aa13.25□□□□□ -0.29
PACSIN3-209ENST00000532457 LAMTOR3Q9UHA4 124 aa13.25□□□□□ -0.29
PACSIN3-209ENST00000532457 GHRHP01286 108 aa13.23□□□□□ -0.29
PACSIN3-209ENST00000532457 SPRR4Q96PI1 79 aa13.23□□□□□ -0.29
PACSIN3-209ENST00000532457 CDIP1Q9H305 208 aa13.23□□□□□ -0.29
PACSIN3-209ENST00000532457 SPRR1BP22528 89 aa13.22□□□□□ -0.29
PACSIN3-209ENST00000532457 KRTAP10-4P60372 401 aaPredicted RBP13.21□□□□□ -0.29
PACSIN3-209ENST00000532457 C14orf132Q9NPU4 83 aa13.2□□□□□ -0.3
PACSIN3-209ENST00000532457 ANAPC11Q9NYG5 84 aa13.2□□□□□ -0.3
PACSIN3-209ENST00000532457 FAM240AA0A1B0GVK7 77 aa13.18□□□□□ -0.3
PACSIN3-209ENST00000532457 JMJD7-PLA2G4BH0Y9G9 81 aa13.17□□□□□ -0.3
PACSIN3-209ENST00000532457 RBM3P98179 157 aaKnown RBP13.17□□□□□ -0.3
PACSIN3-209ENST00000532457 LINC00483Q53H64 154 aa13.16□□□□□ -0.3
PACSIN3-209ENST00000532457 SIGMAR1Q99720 223 aa13.16□□□□□ -0.3
PACSIN3-209ENST00000532457 KRTAP4-5Q9BYR2 181 aa13.16□□□□□ -0.3
PACSIN3-209ENST00000532457 ZNF706Q9Y5V0 76 aaPredicted RBP13.12□□□□□ -0.31
PACSIN3-209ENST00000532457 ACYP1P07311 99 aa13.11□□□□□ -0.31
PACSIN3-209ENST00000532457 A0A0G2JQZ4 141 aa13.11□□□□□ -0.31
PACSIN3-209ENST00000532457 TRBV7-4A0A0J9YYF1 115 aa13.11□□□□□ -0.31
PACSIN3-209ENST00000532457 SPINK6Q6UWN8 80 aa13.11□□□□□ -0.31
PACSIN3-209ENST00000532457 ABCA13Q86UQ4 5058 aa13.09□□□□□ -0.31
PACSIN3-209ENST00000532457 Q6ZQT0 140 aa13.09□□□□□ -0.31
PACSIN3-209ENST00000532457 LOC110117498A0A087WWA1 95 aa13.08□□□□□ -0.32
PACSIN3-209ENST00000532457 DSCR8Q96T75 97 aa13.08□□□□□ -0.32
PACSIN3-209ENST00000532457 IGLV8-61A0A075B6I0 122 aa13.06□□□□□ -0.32
PACSIN3-209ENST00000532457 KRTAP1-4P0C5Y4 121 aa13.06□□□□□ -0.32
PACSIN3-209ENST00000532457 CCKP06307 115 aa13.05□□□□□ -0.32
PACSIN3-209ENST00000532457 IGLV9-49A0A0B4J1Y8 123 aa13.04□□□□□ -0.32
PACSIN3-209ENST00000532457 F8WEM9 126 aa13.04□□□□□ -0.32
PACSIN3-209ENST00000532457 MT-ATP8P03928 68 aa13.04□□□□□ -0.32
PACSIN3-209ENST00000532457 PKHD1L1Q86WI1 4243 aa13.03□□□□□ -0.32
PACSIN3-209ENST00000532457 IGFL1Q6UW32 110 aa13.02□□□□□ -0.32
PACSIN3-209ENST00000532457 A0A087X002 238 aa13□□□□□ -0.33
PACSIN3-209ENST00000532457 A0A1W2PNM2 257 aa12.99□□□□□ -0.33
PACSIN3-209ENST00000532457 PDE6GP18545 87 aa12.98□□□□□ -0.33
PACSIN3-209ENST00000532457 KRTAP13-2Q52LG2 175 aa12.97□□□□□ -0.33
PACSIN3-209ENST00000532457 MYCBP2O75592 4640 aa12.97□□□□□ -0.33
PACSIN3-209ENST00000532457 MOBPQ13875 183 aa12.97□□□□□ -0.33
PACSIN3-209ENST00000532457 C9orf153Q5TBE3 101 aa12.97□□□□□ -0.33
PACSIN3-209ENST00000532457 PCLOQ9Y6V0 5065 aa12.96□□□□□ -0.33
PACSIN3-209ENST00000532457 SCGB1A1P11684 91 aa12.96□□□□□ -0.33
PACSIN3-209ENST00000532457 PCP4P48539 62 aa12.95□□□□□ -0.34
PACSIN3-209ENST00000532457 FLG2Q5D862 2391 aaPredicted RBP12.94□□□□□ -0.34
PACSIN3-209ENST00000532457 FAM229BQ4G0N7 80 aa12.93□□□□□ -0.34
PACSIN3-209ENST00000532457 Q6JHZ5 121 aa12.92□□□□□ -0.34
PACSIN3-209ENST00000532457 LINC00846Q9NV44 126 aa12.92□□□□□ -0.34
PACSIN3-209ENST00000532457 LINC00643Q86TS7 51 aa12.91□□□□□ -0.34
PACSIN3-209ENST00000532457 Q8NBF4 154 aa12.91□□□□□ -0.34
PACSIN3-209ENST00000532457 LRP1Q07954 4544 aaKnown RBP12.89□□□□□ -0.35
PACSIN3-209ENST00000532457 OXTP01178 125 aa12.88□□□□□ -0.35
PACSIN3-209ENST00000532457 CRYGAP11844 174 aa12.88□□□□□ -0.35
PACSIN3-209ENST00000532457 FAT3Q8TDW7 4589 aa12.88□□□□□ -0.35
PACSIN3-209ENST00000532457 Q6Q795 121 aa12.85□□□□□ -0.35
PACSIN3-209ENST00000532457 PRR26Q8N8Z3 221 aa12.85□□□□□ -0.35
PACSIN3-209ENST00000532457 HRCT1Q6UXD1 115 aa12.84□□□□□ -0.35
PACSIN3-209ENST00000532457 SSBP3-AS1Q7Z2R9 100 aa12.84□□□□□ -0.35
PACSIN3-209ENST00000532457 TRBV7-7A0A0K0K1E9 115 aa12.83□□□□□ -0.35
PACSIN3-209ENST00000532457 KRTAP29-1A8MX34 341 aaPredicted RBP12.83□□□□□ -0.35
PACSIN3-209ENST00000532457 C21orf62-AS1Q17RA5 79 aa12.83□□□□□ -0.36
PACSIN3-209ENST00000532457 IMUPQ9GZP8 106 aa12.79□□□□□ -0.36
PACSIN3-209ENST00000532457 A0A087WSZ3 146 aa12.78□□□□□ -0.36
PACSIN3-209ENST00000532457 TYMSOSQ8TAI1 123 aa12.77□□□□□ -0.37
PACSIN3-209ENST00000532457 A0A1B0GW54 56 aa12.76□□□□□ -0.37
PACSIN3-209ENST00000532457 J3QL48 77 aa12.76□□□□□ -0.37
PACSIN3-209ENST00000532457 Q6ZVQ6 151 aa12.76□□□□□ -0.37
PACSIN3-209ENST00000532457 UBL5Q9BZL1 73 aa12.75□□□□□ -0.37
PACSIN3-209ENST00000532457 NREPQ16612 68 aa12.7□□□□□ -0.38
PACSIN3-209ENST00000532457 IGKV3D-7A0A0C4DH55 119 aa12.69□□□□□ -0.38
PACSIN3-209ENST00000532457 KRTAP10-8P60410 259 aa12.69□□□□□ -0.38
PACSIN3-209ENST00000532457 CD164Q04900 197 aa12.69□□□□□ -0.38
PACSIN3-209ENST00000532457 ATP5EP2Q5VTU8 51 aa12.69□□□□□ -0.38
PACSIN3-209ENST00000532457 TNXBP22105 4242 aa12.69□□□□□ -0.38
PACSIN3-209ENST00000532457 MT1HL1P0DM35 61 aa12.67□□□□□ -0.38
PACSIN3-209ENST00000532457 DMBT1Q9UGM3 2413 aaPredicted RBP12.66□□□□□ -0.38
PACSIN3-209ENST00000532457 DEFB116Q30KQ4 102 aa12.64□□□□□ -0.39
PACSIN3-209ENST00000532457 LINC00304Q8N9R0 145 aa12.62□□□□□ -0.39
PACSIN3-209ENST00000532457 LINC00472Q9H8W2 130 aa12.62□□□□□ -0.39
PACSIN3-209ENST00000532457 Q96NJ1 140 aa12.6□□□□□ -0.39
PACSIN3-209ENST00000532457 FAM236AA0A1B0GUQ0 79 aa12.58□□□□□ -0.4
PACSIN3-209ENST00000532457 FAM236BA0A1B0GV22 79 aa12.58□□□□□ -0.4
PACSIN3-209ENST00000532457 C4orf48Q5BLP8 95 aa12.58□□□□□ -0.4
PACSIN3-209ENST00000532457 ANAPC13Q9BS18 74 aa12.58□□□□□ -0.4
PACSIN3-209ENST00000532457 SPINK1P00995 79 aa12.56□□□□□ -0.4
PACSIN3-209ENST00000532457 CXCL6P80162 114 aa12.56□□□□□ -0.4
PACSIN3-209ENST00000532457 BPY2O14599 106 aa12.55□□□□□ -0.4
PACSIN3-209ENST00000532457 SS18L2Q9UHA2 77 aa12.55□□□□□ -0.4
PACSIN3-209ENST00000532457 Q5XG85 94 aa12.54□□□□□ -0.4
PACSIN3-209ENST00000532457 DSCR10P59022 87 aa12.53□□□□□ -0.4
PACSIN3-209ENST00000532457 HIST1H4AP62805 103 aaKnown RBP12.53□□□□□ -0.4
PACSIN3-209ENST00000532457 SPAG11AQ6PDA7 123 aa12.53□□□□□ -0.4
PACSIN3-209ENST00000532457 A0A087WVE0 104 aa12.52□□□□□ -0.41
PACSIN3-209ENST00000532457 Q8N9L7 120 aa12.52□□□□□ -0.41
PACSIN3-209ENST00000532457 HERC1Q15751 4861 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms