RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 IGLV5-37A0A075B6J1 123 aa10.07□□□□□ -0.8
PKP3-208ENST00000531857 NCR3O14931 201 aa10.07□□□□□ -0.8
PKP3-208ENST00000531857 MTURNQ8N3F0 131 aa10.07□□□□□ -0.8
PKP3-208ENST00000531857 VPS25Q9BRG1 176 aa10.07□□□□□ -0.8
PKP3-208ENST00000531857 TRAV23DV6A0A075B6W5 121 aa10.05□□□□□ -0.8
PKP3-208ENST00000531857 NKAPP1Q8N9T2 125 aa10.05□□□□□ -0.8
PKP3-208ENST00000531857 ORMDL1Q9P0S3 153 aa10.05□□□□□ -0.8
PKP3-208ENST00000531857 C6orf99Q4VX62 202 aa10.04□□□□□ -0.8
PKP3-208ENST00000531857 KRTAP13-1Q8IUC0 172 aa10.04□□□□□ -0.8
PKP3-208ENST00000531857 TMEM256-PLSCR3K7ERE1 68 aa10.03□□□□□ -0.8
PKP3-208ENST00000531857 C21orf62-AS1Q17RA5 79 aa10.03□□□□□ -0.8
PKP3-208ENST00000531857 FAM218AQ96MZ4 157 aa10.03□□□□□ -0.8
PKP3-208ENST00000531857 CDIP1Q9H305 208 aa10.03□□□□□ -0.8
PKP3-208ENST00000531857 TRBV10-3A0A0K0K1G6 114 aa10.02□□□□□ -0.81
PKP3-208ENST00000531857 ACYP1P07311 99 aa10.02□□□□□ -0.81
PKP3-208ENST00000531857 LINC00575Q6W349 94 aa10.02□□□□□ -0.81
PKP3-208ENST00000531857 LINC00304Q8N9R0 145 aa10.02□□□□□ -0.81
PKP3-208ENST00000531857 FAM240AA0A1B0GVK7 77 aa10.01□□□□□ -0.81
PKP3-208ENST00000531857 ZNF73O43830 326 aaPredicted RBP10.01□□□□□ -0.81
PKP3-208ENST00000531857 TPRXLQ17RH7 258 aa10.01□□□□□ -0.81
PKP3-208ENST00000531857 MUC17Q685J3 4493 aa10.01□□□□□ -0.81
PKP3-208ENST00000531857 hADV29S1A0JD25 119 aa10□□□□□ -0.81
PKP3-208ENST00000531857 UBE2AP49459 152 aa10□□□□□ -0.81
PKP3-208ENST00000531857 FAM229BQ4G0N7 80 aa10□□□□□ -0.81
PKP3-208ENST00000531857 Q8NDZ9 215 aa10□□□□□ -0.81
PKP3-208ENST00000531857 IGLV7-46A0A075B6I9 117 aa9.99□□□□□ -0.81
PKP3-208ENST00000531857 JMJD7-PLA2G4BH0Y9G9 81 aa9.99□□□□□ -0.81
PKP3-208ENST00000531857 COX7BP24311 80 aa9.99□□□□□ -0.81
PKP3-208ENST00000531857 KCNQ1DNQ9H478 68 aa9.99□□□□□ -0.81
PKP3-208ENST00000531857 PRYO14603 147 aa9.98□□□□□ -0.81
PKP3-208ENST00000531857 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.98□□□□□ -0.81
PKP3-208ENST00000531857 ELOF1P60002 83 aaKnown RBP9.97□□□□□ -0.81
PKP3-208ENST00000531857 TEX49A0A1B0GTD5 131 aa9.96□□□□□ -0.82
PKP3-208ENST00000531857 PRLHP81277 87 aa9.94□□□□□ -0.82
PKP3-208ENST00000531857 OBSCN-AS1Q96MR7 158 aa9.94□□□□□ -0.82
PKP3-208ENST00000531857 SIGMAR1Q99720 223 aa9.93□□□□□ -0.82
PKP3-208ENST00000531857 DHRS4-AS1Q9P1J3 65 aa9.92□□□□□ -0.82
PKP3-208ENST00000531857 PDE6GP18545 87 aa9.91□□□□□ -0.82
PKP3-208ENST00000531857 C3orf22Q8N5N4 141 aa9.91□□□□□ -0.82
PKP3-208ENST00000531857 FAM19A1Q7Z5A9 133 aa9.9□□□□□ -0.82
PKP3-208ENST00000531857 SPRR1AP35321 89 aa9.89□□□□□ -0.83
PKP3-208ENST00000531857 SCGB1A1P11684 91 aa9.87□□□□□ -0.83
PKP3-208ENST00000531857 ETDCA0A1B0GVM5 59 aa9.86□□□□□ -0.83
PKP3-208ENST00000531857 Q6ZQY7 126 aa9.85□□□□□ -0.83
PKP3-208ENST00000531857 Q6ZRX8 168 aa9.84□□□□□ -0.83
PKP3-208ENST00000531857 RBM3P98179 157 aaKnown RBP9.83□□□□□ -0.84
PKP3-208ENST00000531857 KRTAP4-16G5E9R7 235 aaPredicted RBP9.82□□□□□ -0.84
PKP3-208ENST00000531857 KRTAP4-1Q9BYQ7 146 aa9.82□□□□□ -0.84
PKP3-208ENST00000531857 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
PKP3-208ENST00000531857 LOC110117498A0A087WWA1 95 aa9.81□□□□□ -0.84
PKP3-208ENST00000531857 B5MCH6 92 aa9.81□□□□□ -0.84
PKP3-208ENST00000531857 CCKP06307 115 aa9.81□□□□□ -0.84
PKP3-208ENST00000531857 KRTAP13-3Q3SY46 172 aa9.81□□□□□ -0.84
PKP3-208ENST00000531857 HIGD2AQ9BW72 106 aa9.81□□□□□ -0.84
PKP3-208ENST00000531857 SPAG11AQ6PDA7 123 aa9.8□□□□□ -0.84
PKP3-208ENST00000531857 FP248Q71RG6 208 aaPredicted RBP9.8□□□□□ -0.84
PKP3-208ENST00000531857 DSCR8Q96T75 97 aa9.8□□□□□ -0.84
PKP3-208ENST00000531857 ASB16-AS1Q495Z4 193 aa9.79□□□□□ -0.84
PKP3-208ENST00000531857 C4orf48Q5BLP8 95 aa9.79□□□□□ -0.84
PKP3-208ENST00000531857 LCE2DQ5TA82 110 aaPredicted RBP9.79□□□□□ -0.84
PKP3-208ENST00000531857 SPRR4Q96PI1 79 aa9.79□□□□□ -0.84
PKP3-208ENST00000531857 LINC01547P58512 204 aaPredicted RBP9.78□□□□□ -0.84
PKP3-208ENST00000531857 GAGE2AQ6NT46 116 aa9.78□□□□□ -0.84
PKP3-208ENST00000531857 LINC00643Q86TS7 51 aa9.78□□□□□ -0.84
PKP3-208ENST00000531857 FSIP2Q5CZC0 6907 aa9.77□□□□□ -0.84
PKP3-208ENST00000531857 Q6Q795 121 aa9.77□□□□□ -0.85
PKP3-208ENST00000531857 IMUPQ9GZP8 106 aa9.77□□□□□ -0.85
PKP3-208ENST00000531857 C14orf132Q9NPU4 83 aa9.77□□□□□ -0.85
PKP3-208ENST00000531857 A0A1B0GW54 56 aa9.76□□□□□ -0.85
PKP3-208ENST00000531857 NDUFV3P56181 108 aaKnown RBP9.76□□□□□ -0.85
PKP3-208ENST00000531857 Q8NBF4 154 aa9.75□□□□□ -0.85
PKP3-208ENST00000531857 IGLV5-48A0A075B6I7 105 aa9.73□□□□□ -0.85
PKP3-208ENST00000531857 ZNF706Q9Y5V0 76 aaPredicted RBP9.73□□□□□ -0.85
PKP3-208ENST00000531857 CRCT1Q9UGL9 99 aa9.72□□□□□ -0.85
PKP3-208ENST00000531857 Q6ZQT0 140 aa9.71□□□□□ -0.86
PKP3-208ENST00000531857 TRBV7-4A0A0J9YYF1 115 aa9.7□□□□□ -0.86
PKP3-208ENST00000531857 ATP5EP2Q5VTU8 51 aa9.7□□□□□ -0.86
PKP3-208ENST00000531857 SEC61BP60468 96 aaKnown RBP9.69□□□□□ -0.86
PKP3-208ENST00000531857 Q9BRP9 147 aa9.69□□□□□ -0.86
PKP3-208ENST00000531857 UBL5Q9BZL1 73 aa9.69□□□□□ -0.86
PKP3-208ENST00000531857 TRBV7-7A0A0K0K1E9 115 aa9.68□□□□□ -0.86
PKP3-208ENST00000531857 MT-ATP8P03928 68 aa9.68□□□□□ -0.86
PKP3-208ENST00000531857 SPINK1P00995 79 aa9.67□□□□□ -0.86
PKP3-208ENST00000531857 Q8N377 158 aa9.67□□□□□ -0.86
PKP3-208ENST00000531857 SMCR5Q8TEV8 140 aa9.67□□□□□ -0.86
PKP3-208ENST00000531857 Q6JHZ5 121 aa9.66□□□□□ -0.86
PKP3-208ENST00000531857 PCP4P48539 62 aa9.65□□□□□ -0.86
PKP3-208ENST00000531857 F8WEM9 126 aa9.64□□□□□ -0.87
PKP3-208ENST00000531857 LINC00483Q53H64 154 aa9.63□□□□□ -0.87
PKP3-208ENST00000531857 LCE2CQ5TA81 110 aa9.63□□□□□ -0.87
PKP3-208ENST00000531857 LINC00846Q9NV44 126 aa9.63□□□□□ -0.87
PKP3-208ENST00000531857 SPRR1BP22528 89 aa9.61□□□□□ -0.87
PKP3-208ENST00000531857 DEFB105AQ8NG35 78 aa9.61□□□□□ -0.87
PKP3-208ENST00000531857 MOBPQ13875 183 aa9.6□□□□□ -0.87
PKP3-208ENST00000531857 IGLV9-49A0A0B4J1Y8 123 aa9.59□□□□□ -0.87
PKP3-208ENST00000531857 XP32Q5T750 250 aa9.59□□□□□ -0.87
PKP3-208ENST00000531857 IGLV8-61A0A075B6I0 122 aa9.58□□□□□ -0.88
PKP3-208ENST00000531857 ERC2-IT1O76042 136 aa9.58□□□□□ -0.88
PKP3-208ENST00000531857 RPS29P62273 56 aaKnown RBP9.57□□□□□ -0.88
PKP3-208ENST00000531857 A0A1B0GV72 72 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms