RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 H3BQ85 93 aa7.38□□□□□ -1.23
TRAF3IP2-211ENST00000528599 Q9BRP9 147 aa7.38□□□□□ -1.23
TRAF3IP2-211ENST00000528599 TMEM256-PLSCR3K7ERE1 68 aa7.38□□□□□ -1.23
TRAF3IP2-211ENST00000528599 SMCR5Q8TEV8 140 aa7.38□□□□□ -1.23
TRAF3IP2-211ENST00000528599 HIGD2AQ9BW72 106 aa7.37□□□□□ -1.23
TRAF3IP2-211ENST00000528599 hADV29S1A0JD25 119 aa7.36□□□□□ -1.23
TRAF3IP2-211ENST00000528599 SCGB1A1P11684 91 aa7.36□□□□□ -1.23
TRAF3IP2-211ENST00000528599 PCP4P48539 62 aa7.36□□□□□ -1.23
TRAF3IP2-211ENST00000528599 ERC2-IT1O76042 136 aa7.35□□□□□ -1.23
TRAF3IP2-211ENST00000528599 GHRHP01286 108 aa7.35□□□□□ -1.23
TRAF3IP2-211ENST00000528599 SPINK6Q6UWN8 80 aa7.35□□□□□ -1.23
TRAF3IP2-211ENST00000528599 JMJD7-PLA2G4BH0Y9G9 81 aa7.34□□□□□ -1.23
TRAF3IP2-211ENST00000528599 DHRS4-AS1Q9P1J3 65 aa7.33□□□□□ -1.24
TRAF3IP2-211ENST00000528599 PKHD1L1Q86WI1 4243 aa7.33□□□□□ -1.24
TRAF3IP2-211ENST00000528599 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.32□□□□□ -1.24
TRAF3IP2-211ENST00000528599 FAT3Q8TDW7 4589 aa7.32□□□□□ -1.24
TRAF3IP2-211ENST00000528599 MT-ATP8P03928 68 aa7.3□□□□□ -1.24
TRAF3IP2-211ENST00000528599 ST20-AS1Q8NBB2 130 aa7.3□□□□□ -1.24
TRAF3IP2-211ENST00000528599 HERC1Q15751 4861 aa7.3□□□□□ -1.24
TRAF3IP2-211ENST00000528599 SPRR4Q96PI1 79 aa7.28□□□□□ -1.24
TRAF3IP2-211ENST00000528599 KRTAP1-4P0C5Y4 121 aa7.28□□□□□ -1.24
TRAF3IP2-211ENST00000528599 Q6ZQY7 126 aa7.28□□□□□ -1.24
TRAF3IP2-211ENST00000528599 Q6Q795 121 aa7.27□□□□□ -1.25
TRAF3IP2-211ENST00000528599 C14orf132Q9NPU4 83 aa7.27□□□□□ -1.25
TRAF3IP2-211ENST00000528599 ANAPC11Q9NYG5 84 aa7.27□□□□□ -1.25
TRAF3IP2-211ENST00000528599 CCKP06307 115 aa7.26□□□□□ -1.25
TRAF3IP2-211ENST00000528599 PDE6GP18545 87 aa7.25□□□□□ -1.25
TRAF3IP2-211ENST00000528599 LINC01547P58512 204 aaPredicted RBP7.25□□□□□ -1.25
TRAF3IP2-211ENST00000528599 GAGE2AQ6NT46 116 aa7.25□□□□□ -1.25
TRAF3IP2-211ENST00000528599 LINC00643Q86TS7 51 aa7.25□□□□□ -1.25
TRAF3IP2-211ENST00000528599 ZNF706Q9Y5V0 76 aaPredicted RBP7.25□□□□□ -1.25
TRAF3IP2-211ENST00000528599 DMBT1Q9UGM3 2413 aaPredicted RBP7.25□□□□□ -1.25
TRAF3IP2-211ENST00000528599 RBM3P98179 157 aaKnown RBP7.25□□□□□ -1.25
TRAF3IP2-211ENST00000528599 DEFB105AQ8NG35 78 aa7.25□□□□□ -1.25
TRAF3IP2-211ENST00000528599 IGLV5-48A0A075B6I7 105 aa7.24□□□□□ -1.25
TRAF3IP2-211ENST00000528599 LOC110117498A0A087WWA1 95 aa7.24□□□□□ -1.25
TRAF3IP2-211ENST00000528599 C21orf62-AS1Q17RA5 79 aa7.24□□□□□ -1.25
TRAF3IP2-211ENST00000528599 LINC00483Q53H64 154 aa7.24□□□□□ -1.25
TRAF3IP2-211ENST00000528599 IMUPQ9GZP8 106 aa7.24□□□□□ -1.25
TRAF3IP2-211ENST00000528599 SPRR1BP22528 89 aa7.22□□□□□ -1.25
TRAF3IP2-211ENST00000528599 Q8N377 158 aa7.22□□□□□ -1.25
TRAF3IP2-211ENST00000528599 TRBV7-7A0A0K0K1E9 115 aa7.22□□□□□ -1.25
TRAF3IP2-211ENST00000528599 LAMTOR3Q9UHA4 124 aa7.22□□□□□ -1.25
TRAF3IP2-211ENST00000528599 A0A087X002 238 aa7.21□□□□□ -1.26
TRAF3IP2-211ENST00000528599 FAM229BQ4G0N7 80 aa7.2□□□□□ -1.26
TRAF3IP2-211ENST00000528599 Q6ZQT0 140 aa7.2□□□□□ -1.26
TRAF3IP2-211ENST00000528599 PRR26Q8N8Z3 221 aa7.2□□□□□ -1.26
TRAF3IP2-211ENST00000528599 KRTAP29-1A8MX34 341 aaPredicted RBP7.19□□□□□ -1.26
TRAF3IP2-211ENST00000528599 NDUFV3P56181 108 aaKnown RBP7.19□□□□□ -1.26
TRAF3IP2-211ENST00000528599 SMIM29Q86T20 159 aa7.19□□□□□ -1.26
TRAF3IP2-211ENST00000528599 C3orf22Q8N5N4 141 aa7.19□□□□□ -1.26
TRAF3IP2-211ENST00000528599 DSCR8Q96T75 97 aa7.19□□□□□ -1.26
TRAF3IP2-211ENST00000528599 LINC00846Q9NV44 126 aa7.19□□□□□ -1.26
TRAF3IP2-211ENST00000528599 TNXBP22105 4242 aa7.19□□□□□ -1.26
TRAF3IP2-211ENST00000528599 TRBV7-4A0A0J9YYF1 115 aa7.19□□□□□ -1.26
TRAF3IP2-211ENST00000528599 CRYGAP11844 174 aa7.19□□□□□ -1.26
TRAF3IP2-211ENST00000528599 KRTAP13-2Q52LG2 175 aa7.19□□□□□ -1.26
TRAF3IP2-211ENST00000528599 IGLV9-49A0A0B4J1Y8 123 aa7.16□□□□□ -1.26
TRAF3IP2-211ENST00000528599 OXTP01178 125 aa7.16□□□□□ -1.26
TRAF3IP2-211ENST00000528599 MT1HL1P0DM35 61 aa7.16□□□□□ -1.26
TRAF3IP2-211ENST00000528599 Q6JHZ5 121 aa7.16□□□□□ -1.26
TRAF3IP2-211ENST00000528599 KRTAP10-8P60410 259 aa7.15□□□□□ -1.27
TRAF3IP2-211ENST00000528599 A0A1B0GV72 72 aa7.13□□□□□ -1.27
TRAF3IP2-211ENST00000528599 MOBPQ13875 183 aa7.13□□□□□ -1.27
TRAF3IP2-211ENST00000528599 ATP5EP2Q5VTU8 51 aa7.13□□□□□ -1.27
TRAF3IP2-211ENST00000528599 A0A1B0GW54 56 aa7.12□□□□□ -1.27
TRAF3IP2-211ENST00000528599 J3QL48 77 aa7.12□□□□□ -1.27
TRAF3IP2-211ENST00000528599 TYMSOSQ8TAI1 123 aa7.12□□□□□ -1.27
TRAF3IP2-211ENST00000528599 UBL5Q9BZL1 73 aa7.12□□□□□ -1.27
TRAF3IP2-211ENST00000528599 C9orf153Q5TBE3 101 aa7.12□□□□□ -1.27
TRAF3IP2-211ENST00000528599 F8WEM9 126 aa7.1□□□□□ -1.27
TRAF3IP2-211ENST00000528599 Q8NBF4 154 aa7.1□□□□□ -1.27
TRAF3IP2-211ENST00000528599 SSBP3-AS1Q7Z2R9 100 aa7.09□□□□□ -1.27
TRAF3IP2-211ENST00000528599 IGLV8-61A0A075B6I0 122 aa7.09□□□□□ -1.27
TRAF3IP2-211ENST00000528599 A0A0G2JQZ4 141 aa7.09□□□□□ -1.27
TRAF3IP2-211ENST00000528599 IGFL1Q6UW32 110 aa7.06□□□□□ -1.28
TRAF3IP2-211ENST00000528599 Q6ZVQ6 151 aa7.06□□□□□ -1.28
TRAF3IP2-211ENST00000528599 ANAPC13Q9BS18 74 aa7.06□□□□□ -1.28
TRAF3IP2-211ENST00000528599 IGKV3D-7A0A0C4DH55 119 aa7.05□□□□□ -1.28
TRAF3IP2-211ENST00000528599 HIST1H4AP62805 103 aaKnown RBP7.05□□□□□ -1.28
TRAF3IP2-211ENST00000528599 CXCL6P80162 114 aa7.05□□□□□ -1.28
TRAF3IP2-211ENST00000528599 LINC00304Q8N9R0 145 aa7.05□□□□□ -1.28
TRAF3IP2-211ENST00000528599 HMCN2Q8NDA2 5059 aa7.03□□□□□ -1.28
TRAF3IP2-211ENST00000528599 FAM236AA0A1B0GUQ0 79 aa7.03□□□□□ -1.28
TRAF3IP2-211ENST00000528599 FAM236BA0A1B0GV22 79 aa7.03□□□□□ -1.28
TRAF3IP2-211ENST00000528599 HRCT1Q6UXD1 115 aa7.02□□□□□ -1.29
TRAF3IP2-211ENST00000528599 A0A1W2PNM2 257 aa7□□□□□ -1.29
TRAF3IP2-211ENST00000528599 C4orf48Q5BLP8 95 aa7□□□□□ -1.29
TRAF3IP2-211ENST00000528599 SPAG11AQ6PDA7 123 aa7□□□□□ -1.29
TRAF3IP2-211ENST00000528599 ATOX1O00244 68 aa6.99□□□□□ -1.29
TRAF3IP2-211ENST00000528599 CD164Q04900 197 aa6.99□□□□□ -1.29
TRAF3IP2-211ENST00000528599 NREPQ16612 68 aa6.99□□□□□ -1.29
TRAF3IP2-211ENST00000528599 SPINK1P00995 79 aa6.98□□□□□ -1.29
TRAF3IP2-211ENST00000528599 A0A087WVE0 104 aa6.96□□□□□ -1.3
TRAF3IP2-211ENST00000528599 RPS29P62273 56 aaKnown RBP6.94□□□□□ -1.3
TRAF3IP2-211ENST00000528599 BPY2O14599 106 aa6.92□□□□□ -1.3
TRAF3IP2-211ENST00000528599 UQCRQO14949 82 aa6.92□□□□□ -1.3
TRAF3IP2-211ENST00000528599 A0A087WSZ3 146 aa6.91□□□□□ -1.3
TRAF3IP2-211ENST00000528599 Q5XG85 94 aa6.91□□□□□ -1.3
TRAF3IP2-211ENST00000528599 LRP2P98164 4655 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms