RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 NREPQ16612 68 aa10.14□□□□□ -0.79
SNRNP35-204ENST00000527158 Q8N377 158 aa10.14□□□□□ -0.79
SNRNP35-204ENST00000527158 FAM236DA0A1B0GTK5 79 aa10.14□□□□□ -0.79
SNRNP35-204ENST00000527158 ERC2-IT1O76042 136 aa10.14□□□□□ -0.79
SNRNP35-204ENST00000527158 FAM236CP0DP71 79 aa10.14□□□□□ -0.79
SNRNP35-204ENST00000527158 EPM2AB3EWF7 344 aa10.12□□□□□ -0.79
SNRNP35-204ENST00000527158 PRLHP81277 87 aa10.12□□□□□ -0.79
SNRNP35-204ENST00000527158 KRTAP11-1Q8IUC1 163 aa10.12□□□□□ -0.79
SNRNP35-204ENST00000527158 ST20-AS1Q8NBB2 130 aa10.12□□□□□ -0.79
SNRNP35-204ENST00000527158 H7BZZ5 65 aa10.11□□□□□ -0.79
SNRNP35-204ENST00000527158 H0Y9J4 135 aa10.1□□□□□ -0.79
SNRNP35-204ENST00000527158 HIGD2AQ9BW72 106 aa10.09□□□□□ -0.79
SNRNP35-204ENST00000527158 ATP5EP56381 51 aaPredicted RBP10.09□□□□□ -0.79
SNRNP35-204ENST00000527158 BPY2O14599 106 aa10.08□□□□□ -0.8
SNRNP35-204ENST00000527158 UBE2AP49459 152 aa10.08□□□□□ -0.8
SNRNP35-204ENST00000527158 SERP1Q9Y6X1 66 aa10.08□□□□□ -0.8
SNRNP35-204ENST00000527158 DNAH2Q9P225 4427 aa10.08□□□□□ -0.8
SNRNP35-204ENST00000527158 SCXQ7RTU7 201 aa10.08□□□□□ -0.8
SNRNP35-204ENST00000527158 IGKV4-1P06312 121 aa10.07□□□□□ -0.8
SNRNP35-204ENST00000527158 PLAC8Q9NZF1 115 aa10.07□□□□□ -0.8
SNRNP35-204ENST00000527158 ALMS1Q8TCU4 4167 aa10.05□□□□□ -0.8
SNRNP35-204ENST00000527158 DNAH6Q9C0G6 4158 aa10.05□□□□□ -0.8
SNRNP35-204ENST00000527158 C5orf47Q569G3 176 aa10.05□□□□□ -0.8
SNRNP35-204ENST00000527158 KRTAP10-2P60368 255 aa10.03□□□□□ -0.8
SNRNP35-204ENST00000527158 OXTP01178 125 aa10.01□□□□□ -0.81
SNRNP35-204ENST00000527158 C1orf137Q5JT78 98 aa10.01□□□□□ -0.81
SNRNP35-204ENST00000527158 Q8NBF4 154 aa10.01□□□□□ -0.81
SNRNP35-204ENST00000527158 HECTD4Q9Y4D8 3996 aa10.01□□□□□ -0.81
SNRNP35-204ENST00000527158 F8WEM9 126 aa10.01□□□□□ -0.81
SNRNP35-204ENST00000527158 SPRR4Q96PI1 79 aa10.01□□□□□ -0.81
SNRNP35-204ENST00000527158 TMEM254Q8TBM7 123 aa10□□□□□ -0.81
SNRNP35-204ENST00000527158 SNURFQ9Y675 71 aa10□□□□□ -0.81
SNRNP35-204ENST00000527158 SMIM29Q86T20 159 aa9.99□□□□□ -0.81
SNRNP35-204ENST00000527158 KRTAP13-1Q8IUC0 172 aa9.99□□□□□ -0.81
SNRNP35-204ENST00000527158 OCR1Q9BZK8 76 aa9.99□□□□□ -0.81
SNRNP35-204ENST00000527158 DNAH17Q9UFH2 4485 aa9.98□□□□□ -0.81
SNRNP35-204ENST00000527158 A0A1W2PNM2 257 aa9.98□□□□□ -0.81
SNRNP35-204ENST00000527158 PSORS1C2Q9UIG4 136 aa9.97□□□□□ -0.81
SNRNP35-204ENST00000527158 SPRR1BP22528 89 aa9.95□□□□□ -0.82
SNRNP35-204ENST00000527158 Q8N9L7 120 aa9.95□□□□□ -0.82
SNRNP35-204ENST00000527158 LCE6AA0A183 80 aa9.95□□□□□ -0.82
SNRNP35-204ENST00000527158 Q5XG85 94 aa9.95□□□□□ -0.82
SNRNP35-204ENST00000527158 A0A0U1RQV1 116 aa9.94□□□□□ -0.82
SNRNP35-204ENST00000527158 FAM30AQ9NZY2 134 aa9.94□□□□□ -0.82
SNRNP35-204ENST00000527158 SMIM26A0A096LP01 95 aa9.92□□□□□ -0.82
SNRNP35-204ENST00000527158 CIRBP-AS1Q8TBR5 109 aa9.92□□□□□ -0.82
SNRNP35-204ENST00000527158 IGLV8-61A0A075B6I0 122 aa9.91□□□□□ -0.82
SNRNP35-204ENST00000527158 KRTAP10-1P60331 282 aa9.91□□□□□ -0.82
SNRNP35-204ENST00000527158 FRAS1Q86XX4 4008 aa9.91□□□□□ -0.82
SNRNP35-204ENST00000527158 HYDINQ4G0P3 5121 aa9.91□□□□□ -0.82
SNRNP35-204ENST00000527158 ZNF861PO60384 105 aa9.9□□□□□ -0.83
SNRNP35-204ENST00000527158 Q6ZSA8 131 aa9.9□□□□□ -0.83
SNRNP35-204ENST00000527158 ZNF706Q9Y5V0 76 aaPredicted RBP9.89□□□□□ -0.83
SNRNP35-204ENST00000527158 IGFL1Q6UW32 110 aa9.88□□□□□ -0.83
SNRNP35-204ENST00000527158 LINC00336Q6ZUF6 198 aa9.88□□□□□ -0.83
SNRNP35-204ENST00000527158 C4orf26Q17RF5 130 aa9.87□□□□□ -0.83
SNRNP35-204ENST00000527158 IGLV7-43P04211 117 aa9.85□□□□□ -0.83
SNRNP35-204ENST00000527158 DSCR10P59022 87 aa9.85□□□□□ -0.83
SNRNP35-204ENST00000527158 A0A0G2JQZ4 141 aa9.83□□□□□ -0.84
SNRNP35-204ENST00000527158 LINC00483Q53H64 154 aa9.83□□□□□ -0.84
SNRNP35-204ENST00000527158 HRCT1Q6UXD1 115 aa9.82□□□□□ -0.84
SNRNP35-204ENST00000527158 DNAH11Q96DT5 4516 aa9.82□□□□□ -0.84
SNRNP35-204ENST00000527158 SRRM2Q9UQ35 2752 aaKnown RBP9.81□□□□□ -0.84
SNRNP35-204ENST00000527158 HCG22E2RYF7 251 aa9.81□□□□□ -0.84
SNRNP35-204ENST00000527158 FAT2Q9NYQ8 4349 aa9.81□□□□□ -0.84
SNRNP35-204ENST00000527158 K7EQZ3 153 aa9.8□□□□□ -0.84
SNRNP35-204ENST00000527158 DNAH5Q8TE73 4624 aa9.79□□□□□ -0.84
SNRNP35-204ENST00000527158 PKD1P98161 4303 aa9.79□□□□□ -0.84
SNRNP35-204ENST00000527158 IGLV9-49A0A0B4J1Y8 123 aa9.78□□□□□ -0.84
SNRNP35-204ENST00000527158 DNAH8Q96JB1 4490 aa9.78□□□□□ -0.84
SNRNP35-204ENST00000527158 A0A087WSZ3 146 aa9.75□□□□□ -0.85
SNRNP35-204ENST00000527158 RPL37AP61513 92 aaKnown RBP9.75□□□□□ -0.85
SNRNP35-204ENST00000527158 FP248Q71RG6 208 aaPredicted RBP9.75□□□□□ -0.85
SNRNP35-204ENST00000527158 ZCCHC13Q8WW36 166 aaKnown RBP9.75□□□□□ -0.85
SNRNP35-204ENST00000527158 SACSQ9NZJ4 4579 aa9.74□□□□□ -0.85
SNRNP35-204ENST00000527158 NDUFB1O75438 58 aa9.73□□□□□ -0.85
SNRNP35-204ENST00000527158 ANAPC11Q9NYG5 84 aa9.73□□□□□ -0.85
SNRNP35-204ENST00000527158 A0A1B0GVY2 172 aa9.71□□□□□ -0.85
SNRNP35-204ENST00000527158 MOBPQ13875 183 aa9.71□□□□□ -0.86
SNRNP35-204ENST00000527158 MP68P56378 58 aa9.69□□□□□ -0.86
SNRNP35-204ENST00000527158 H3BPC8 53 aa9.68□□□□□ -0.86
SNRNP35-204ENST00000527158 CYP4F30PQ9H0H9 118 aa9.66□□□□□ -0.86
SNRNP35-204ENST00000527158 PRO0628Q9UI54 55 aa9.65□□□□□ -0.86
SNRNP35-204ENST00000527158 hDV103S1A0JD37 113 aa9.65□□□□□ -0.86
SNRNP35-204ENST00000527158 A8MWP4 228 aa9.64□□□□□ -0.87
SNRNP35-204ENST00000527158 KRTAP29-1A8MX34 341 aaPredicted RBP9.64□□□□□ -0.87
SNRNP35-204ENST00000527158 PRR15Q8IV56 129 aa9.64□□□□□ -0.87
SNRNP35-204ENST00000527158 DEFB116Q30KQ4 102 aa9.63□□□□□ -0.87
SNRNP35-204ENST00000527158 WFDC13Q8IUB5 93 aa9.62□□□□□ -0.87
SNRNP35-204ENST00000527158 LINC00472Q9H8W2 130 aa9.62□□□□□ -0.87
SNRNP35-204ENST00000527158 CASC2Q6XLA1 102 aa9.61□□□□□ -0.87
SNRNP35-204ENST00000527158 FAM229BQ4G0N7 80 aa9.61□□□□□ -0.87
SNRNP35-204ENST00000527158 SSBP3-AS1Q7Z2R9 100 aa9.61□□□□□ -0.87
SNRNP35-204ENST00000527158 LRP1BQ9NZR2 4599 aa9.58□□□□□ -0.88
SNRNP35-204ENST00000527158 RYR2Q92736 4967 aa9.58□□□□□ -0.88
SNRNP35-204ENST00000527158 TRAV22A0A0B4J277 110 aa9.58□□□□□ -0.88
SNRNP35-204ENST00000527158 C1orf64Q8NEQ6 169 aa9.58□□□□□ -0.88
SNRNP35-204ENST00000527158 SPANXA2-OT1Q8N9U9 137 aa9.57□□□□□ -0.88
SNRNP35-204ENST00000527158 PKHD1P08F94 4074 aa9.56□□□□□ -0.88
SNRNP35-204ENST00000527158 MPLKIPQ8TAP9 179 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms