RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 SIGMAR1Q99720 223 aa4.48□□□□□ -1.69
VPS11-201ENST00000524454 A0A096LNI7 61 aa4.47□□□□□ -1.69
VPS11-201ENST00000524454 A0A1B0GW54 56 aa4.47□□□□□ -1.69
VPS11-201ENST00000524454 Q6ZQY7 126 aa4.47□□□□□ -1.69
VPS11-201ENST00000524454 Q8N1X5 172 aa4.47□□□□□ -1.69
VPS11-201ENST00000524454 ETDCA0A1B0GVM5 59 aa4.46□□□□□ -1.7
VPS11-201ENST00000524454 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
VPS11-201ENST00000524454 B5MCH6 92 aa4.46□□□□□ -1.7
VPS11-201ENST00000524454 Q6Q795 121 aa4.46□□□□□ -1.7
VPS11-201ENST00000524454 KRTAP7-1Q8IUC3 87 aa4.46□□□□□ -1.7
VPS11-201ENST00000524454 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
VPS11-201ENST00000524454 DNAH8Q96JB1 4490 aa4.46□□□□□ -1.7
VPS11-201ENST00000524454 IGLV5-48A0A075B6I7 105 aa4.45□□□□□ -1.7
VPS11-201ENST00000524454 CCKP06307 115 aa4.45□□□□□ -1.7
VPS11-201ENST00000524454 RBM3P98179 157 aaKnown RBP4.45□□□□□ -1.7
VPS11-201ENST00000524454 REG3GQ6UW15 175 aa4.45□□□□□ -1.7
VPS11-201ENST00000524454 FAM19A5Q7Z5A7 132 aaPredicted RBP4.45□□□□□ -1.7
VPS11-201ENST00000524454 IMUPQ9GZP8 106 aa4.45□□□□□ -1.7
VPS11-201ENST00000524454 FAM168BA1KXE4 195 aa4.44□□□□□ -1.7
VPS11-201ENST00000524454 RPL37AP8A6NKH3 93 aa4.44□□□□□ -1.7
VPS11-201ENST00000524454 Q5VSD8 79 aa4.44□□□□□ -1.7
VPS11-201ENST00000524454 ATP5EP2Q5VTU8 51 aa4.44□□□□□ -1.7
VPS11-201ENST00000524454 LINC00643Q86TS7 51 aa4.44□□□□□ -1.7
VPS11-201ENST00000524454 SPACA4Q8TDM5 124 aa4.44□□□□□ -1.7
VPS11-201ENST00000524454 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
VPS11-201ENST00000524454 TRBV7-4A0A0J9YYF1 115 aa4.43□□□□□ -1.7
VPS11-201ENST00000524454 TRBV7-7A0A0K0K1E9 115 aa4.43□□□□□ -1.7
VPS11-201ENST00000524454 DSCR8Q96T75 97 aa4.43□□□□□ -1.7
VPS11-201ENST00000524454 C14orf132Q9NPU4 83 aa4.43□□□□□ -1.7
VPS11-201ENST00000524454 NDUFV3P56181 108 aaKnown RBP4.42□□□□□ -1.7
VPS11-201ENST00000524454 GAGE2AQ6NT46 116 aa4.42□□□□□ -1.7
VPS11-201ENST00000524454 Q6ZQT0 140 aa4.42□□□□□ -1.7
VPS11-201ENST00000524454 SCXQ7RTU7 201 aa4.42□□□□□ -1.7
VPS11-201ENST00000524454 Q9BRP9 147 aa4.42□□□□□ -1.7
VPS11-201ENST00000524454 LAMTOR3Q9UHA4 124 aa4.42□□□□□ -1.7
VPS11-201ENST00000524454 VPS13BQ7Z7G8 4022 aa4.42□□□□□ -1.7
VPS11-201ENST00000524454 IGKV2-24A0A0C4DH68 120 aa4.41□□□□□ -1.7
VPS11-201ENST00000524454 A0A1W2PNN7 141 aa4.41□□□□□ -1.7
VPS11-201ENST00000524454 PANO1I0J062 215 aa4.41□□□□□ -1.7
VPS11-201ENST00000524454 Q6ZSA8 131 aa4.41□□□□□ -1.7
VPS11-201ENST00000524454 PLAC8Q9NZF1 115 aa4.41□□□□□ -1.7
VPS11-201ENST00000524454 FAT1Q14517 4588 aa4.4□□□□□ -1.7
VPS11-201ENST00000524454 LINC01547P58512 204 aaPredicted RBP4.4□□□□□ -1.71
VPS11-201ENST00000524454 Q6JHZ5 121 aa4.4□□□□□ -1.71
VPS11-201ENST00000524454 IGLV8-61A0A075B6I0 122 aa4.39□□□□□ -1.71
VPS11-201ENST00000524454 BCE1O60756 84 aa4.39□□□□□ -1.71
VPS11-201ENST00000524454 MT-ATP8P03928 68 aa4.39□□□□□ -1.71
VPS11-201ENST00000524454 CHTF8P0CG12 524 aa4.39□□□□□ -1.71
VPS11-201ENST00000524454 SPRR1BP22528 89 aa4.39□□□□□ -1.71
VPS11-201ENST00000524454 UBE2BP63146 152 aa4.39□□□□□ -1.71
VPS11-201ENST00000524454 Q8N377 158 aa4.39□□□□□ -1.71
VPS11-201ENST00000524454 CIRBP-AS1Q8TBR5 109 aa4.39□□□□□ -1.71
VPS11-201ENST00000524454 SMCR5Q8TEV8 140 aa4.39□□□□□ -1.71
VPS11-201ENST00000524454 UBL5Q9BZL1 73 aa4.39□□□□□ -1.71
VPS11-201ENST00000524454 KRTAP13-1Q8IUC0 172 aa4.38□□□□□ -1.71
VPS11-201ENST00000524454 FAM19A1Q7Z5A9 133 aa4.37□□□□□ -1.71
VPS11-201ENST00000524454 LINC00846Q9NV44 126 aa4.37□□□□□ -1.71
VPS11-201ENST00000524454 F8WEM9 126 aa4.36□□□□□ -1.71
VPS11-201ENST00000524454 PCP4P48539 62 aa4.36□□□□□ -1.71
VPS11-201ENST00000524454 RPL37AP61513 92 aaKnown RBP4.36□□□□□ -1.71
VPS11-201ENST00000524454 CXCL6P80162 114 aa4.36□□□□□ -1.71
VPS11-201ENST00000524454 PHF5AQ7RTV0 110 aaKnown RBP4.36□□□□□ -1.71
VPS11-201ENST00000524454 ZNF706Q9Y5V0 76 aaPredicted RBP4.36□□□□□ -1.71
VPS11-201ENST00000524454 DPH3Q96FX2 82 aa4.35□□□□□ -1.71
VPS11-201ENST00000524454 SPRR4Q96PI1 79 aa4.35□□□□□ -1.71
VPS11-201ENST00000524454 UBE2AP49459 152 aa4.34□□□□□ -1.71
VPS11-201ENST00000524454 KRTAP10-4P60372 401 aaPredicted RBP4.34□□□□□ -1.71
VPS11-201ENST00000524454 Q8NBF4 154 aa4.34□□□□□ -1.71
VPS11-201ENST00000524454 ERC2-IT1O76042 136 aa4.33□□□□□ -1.72
VPS11-201ENST00000524454 PRLHP81277 87 aa4.33□□□□□ -1.72
VPS11-201ENST00000524454 LINC00483Q53H64 154 aa4.33□□□□□ -1.72
VPS11-201ENST00000524454 C1orf137Q5JT78 98 aa4.33□□□□□ -1.72
VPS11-201ENST00000524454 SMIM29Q86T20 159 aa4.33□□□□□ -1.72
VPS11-201ENST00000524454 PKHD1L1Q86WI1 4243 aa4.32□□□□□ -1.72
VPS11-201ENST00000524454 A0A1B0GV72 72 aa4.32□□□□□ -1.72
VPS11-201ENST00000524454 CRYGAP11844 174 aa4.32□□□□□ -1.72
VPS11-201ENST00000524454 Q6ZVQ6 151 aa4.32□□□□□ -1.72
VPS11-201ENST00000524454 ST20-AS1Q8NBB2 130 aa4.32□□□□□ -1.72
VPS11-201ENST00000524454 HIGD2AQ9BW72 106 aa4.32□□□□□ -1.72
VPS11-201ENST00000524454 SRRM2Q9UQ35 2752 aaKnown RBP4.32□□□□□ -1.72
VPS11-201ENST00000524454 MYCBP2O75592 4640 aa4.31□□□□□ -1.72
VPS11-201ENST00000524454 ZNF861PO60384 105 aa4.31□□□□□ -1.72
VPS11-201ENST00000524454 HIST1H4AP62805 103 aaKnown RBP4.31□□□□□ -1.72
VPS11-201ENST00000524454 KRTAP11-1Q8IUC1 163 aa4.31□□□□□ -1.72
VPS11-201ENST00000524454 DEFB105AQ8NG35 78 aa4.31□□□□□ -1.72
VPS11-201ENST00000524454 FLG2Q5D862 2391 aaPredicted RBP4.31□□□□□ -1.72
VPS11-201ENST00000524454 ATOX1O00244 68 aa4.3□□□□□ -1.72
VPS11-201ENST00000524454 PSORS1C2Q9UIG4 136 aa4.3□□□□□ -1.72
VPS11-201ENST00000524454 A0A1W2PNM2 257 aa4.29□□□□□ -1.72
VPS11-201ENST00000524454 NREPQ16612 68 aa4.29□□□□□ -1.72
VPS11-201ENST00000524454 C3orf22Q8N5N4 141 aa4.28□□□□□ -1.72
VPS11-201ENST00000524454 FAM236AA0A1B0GUQ0 79 aa4.27□□□□□ -1.73
VPS11-201ENST00000524454 FAM236BA0A1B0GV22 79 aa4.27□□□□□ -1.73
VPS11-201ENST00000524454 IGLV7-43P04211 117 aa4.27□□□□□ -1.73
VPS11-201ENST00000524454 IGFL1Q6UW32 110 aa4.27□□□□□ -1.73
VPS11-201ENST00000524454 SMIM20Q8N5G0 67 aa4.27□□□□□ -1.73
VPS11-201ENST00000524454 ANAPC13Q9BS18 74 aa4.27□□□□□ -1.73
VPS11-201ENST00000524454 FAT3Q8TDW7 4589 aa4.27□□□□□ -1.73
VPS11-201ENST00000524454 LRP1Q07954 4544 aaKnown RBP4.27□□□□□ -1.73
VPS11-201ENST00000524454 HERC1Q15751 4861 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms