RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-228ENST00000524023 HRCT1Q6UXD1 115 aa6.95□□□□□ -1.3
HDAC9-228ENST00000524023 UBE2DNLQ8IWF7 75 aa6.95□□□□□ -1.3
HDAC9-228ENST00000524023 CSMD3Q7Z407 3707 aa6.95□□□□□ -1.3
HDAC9-228ENST00000524023 PLECQ15149 4684 aaKnown RBP6.94□□□□□ -1.3
HDAC9-228ENST00000524023 LCE6AA0A183 80 aa6.94□□□□□ -1.3
HDAC9-228ENST00000524023 APLNQ9ULZ1 77 aa6.94□□□□□ -1.3
HDAC9-228ENST00000524023 C14orf177Q52M58 125 aa6.93□□□□□ -1.3
HDAC9-228ENST00000524023 SMIM26A0A096LP01 95 aa6.92□□□□□ -1.3
HDAC9-228ENST00000524023 CHTF8P0CG12 524 aa6.92□□□□□ -1.3
HDAC9-228ENST00000524023 PHF5AQ7RTV0 110 aaKnown RBP6.92□□□□□ -1.3
HDAC9-228ENST00000524023 KRTAP11-1Q8IUC1 163 aa6.92□□□□□ -1.3
HDAC9-228ENST00000524023 A0A087WSZ3 146 aa6.91□□□□□ -1.3
HDAC9-228ENST00000524023 HCG22E2RYF7 251 aa6.91□□□□□ -1.3
HDAC9-228ENST00000524023 UBE2AP49459 152 aa6.91□□□□□ -1.3
HDAC9-228ENST00000524023 FP248Q71RG6 208 aaPredicted RBP6.91□□□□□ -1.3
HDAC9-228ENST00000524023 DEFB116Q30KQ4 102 aa6.9□□□□□ -1.3
HDAC9-228ENST00000524023 H0Y9J4 135 aa6.89□□□□□ -1.31
HDAC9-228ENST00000524023 C9orf163Q8N9P6 203 aa6.89□□□□□ -1.31
HDAC9-228ENST00000524023 SPRR1BP22528 89 aa6.88□□□□□ -1.31
HDAC9-228ENST00000524023 LRCOL1A6NCL2 159 aa6.87□□□□□ -1.31
HDAC9-228ENST00000524023 ZCCHC13Q8WW36 166 aaKnown RBP6.87□□□□□ -1.31
HDAC9-228ENST00000524023 LINC00474Q9P2X8 69 aa6.87□□□□□ -1.31
HDAC9-228ENST00000524023 FAM229BQ4G0N7 80 aa6.85□□□□□ -1.31
HDAC9-228ENST00000524023 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
HDAC9-228ENST00000524023 RPL37AP61513 92 aaKnown RBP6.85□□□□□ -1.31
HDAC9-228ENST00000524023 WFDC13Q8IUB5 93 aa6.85□□□□□ -1.31
HDAC9-228ENST00000524023 NBDYA0A0U1RRE5 68 aa6.84□□□□□ -1.31
HDAC9-228ENST00000524023 PKIGQ9Y2B9 76 aa6.84□□□□□ -1.31
HDAC9-228ENST00000524023 B9D2Q9BPU9 175 aa6.84□□□□□ -1.32
HDAC9-228ENST00000524023 PANO1I0J062 215 aa6.83□□□□□ -1.32
HDAC9-228ENST00000524023 HECTD4Q9Y4D8 3996 aa6.83□□□□□ -1.32
HDAC9-228ENST00000524023 Q6ZRN7 208 aaPredicted RBP6.82□□□□□ -1.32
HDAC9-228ENST00000524023 KRTAP29-1A8MX34 341 aaPredicted RBP6.82□□□□□ -1.32
HDAC9-228ENST00000524023 KRTAP13-1Q8IUC0 172 aa6.81□□□□□ -1.32
HDAC9-228ENST00000524023 LINC00472Q9H8W2 130 aa6.81□□□□□ -1.32
HDAC9-228ENST00000524023 PRR15Q8IV56 129 aa6.81□□□□□ -1.32
HDAC9-228ENST00000524023 MDFIQ99750 246 aa6.81□□□□□ -1.32
HDAC9-228ENST00000524023 STARD9Q9P2P6 4700 aa6.8□□□□□ -1.32
HDAC9-228ENST00000524023 LINC00336Q6ZUF6 198 aa6.79□□□□□ -1.32
HDAC9-228ENST00000524023 hDV103S1A0JD37 113 aa6.79□□□□□ -1.32
HDAC9-228ENST00000524023 NUPR2A6NF83 97 aa6.79□□□□□ -1.32
HDAC9-228ENST00000524023 A8MWP4 228 aa6.79□□□□□ -1.32
HDAC9-228ENST00000524023 CASC2Q6XLA1 102 aa6.78□□□□□ -1.32
HDAC9-228ENST00000524023 MP68P56378 58 aa6.78□□□□□ -1.32
HDAC9-228ENST00000524023 PRKDCP78527 4128 aaKnown RBP6.77□□□□□ -1.32
HDAC9-228ENST00000524023 C1orf64Q8NEQ6 169 aa6.77□□□□□ -1.33
HDAC9-228ENST00000524023 MPLKIPQ8TAP9 179 aa6.77□□□□□ -1.33
HDAC9-228ENST00000524023 SPACA4Q8TDM5 124 aa6.77□□□□□ -1.33
HDAC9-228ENST00000524023 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-228ENST00000524023 DNAH2Q9P225 4427 aa6.76□□□□□ -1.33
HDAC9-228ENST00000524023 DNAH17Q9UFH2 4485 aa6.75□□□□□ -1.33
HDAC9-228ENST00000524023 NDUFB1O75438 58 aa6.75□□□□□ -1.33
HDAC9-228ENST00000524023 CYP4F30PQ9H0H9 118 aa6.75□□□□□ -1.33
HDAC9-228ENST00000524023 TRAV22A0A0B4J277 110 aa6.75□□□□□ -1.33
HDAC9-228ENST00000524023 LINC00208Q96KT6 92 aa6.75□□□□□ -1.33
HDAC9-228ENST00000524023 DNAH8Q96JB1 4490 aa6.75□□□□□ -1.33
HDAC9-228ENST00000524023 H0Y9P7 68 aa6.73□□□□□ -1.33
HDAC9-228ENST00000524023 PRR4Q16378 134 aa6.73□□□□□ -1.33
HDAC9-228ENST00000524023 PRO0628Q9UI54 55 aa6.73□□□□□ -1.33
HDAC9-228ENST00000524023 IGLV9-49A0A0B4J1Y8 123 aa6.72□□□□□ -1.33
HDAC9-228ENST00000524023 A0A087WTM6 91 aa6.72□□□□□ -1.33
HDAC9-228ENST00000524023 MMP24-AS1A0A0U1RRL7 71 aa6.72□□□□□ -1.33
HDAC9-228ENST00000524023 H3BPC8 53 aa6.72□□□□□ -1.33
HDAC9-228ENST00000524023 KMT2AQ03164 3969 aa6.72□□□□□ -1.33
HDAC9-228ENST00000524023 FRAS1Q86XX4 4008 aa6.71□□□□□ -1.33
HDAC9-228ENST00000524023 LINC00483Q53H64 154 aa6.71□□□□□ -1.33
HDAC9-228ENST00000524023 Q96NJ1 140 aa6.71□□□□□ -1.33
HDAC9-228ENST00000524023 Q1T7F1 81 aa6.68□□□□□ -1.34
HDAC9-228ENST00000524023 PSORS1C2Q9UIG4 136 aa6.68□□□□□ -1.34
HDAC9-228ENST00000524023 RTL8CO15255 209 aa6.68□□□□□ -1.34
HDAC9-228ENST00000524023 SPANXA2-OT1Q8N9U9 137 aa6.68□□□□□ -1.34
HDAC9-228ENST00000524023 ZNF706Q9Y5V0 76 aaPredicted RBP6.68□□□□□ -1.34
HDAC9-228ENST00000524023 IGLV5-52A0A0A0MRZ9 124 aa6.67□□□□□ -1.34
HDAC9-228ENST00000524023 MOBPQ13875 183 aa6.67□□□□□ -1.34
HDAC9-228ENST00000524023 WWC2-AS2Q96NR7 200 aa6.67□□□□□ -1.34
HDAC9-228ENST00000524023 BRK1Q8WUW1 75 aa6.67□□□□□ -1.34
HDAC9-228ENST00000524023 FBN3Q75N90 2809 aa6.66□□□□□ -1.34
HDAC9-228ENST00000524023 ASB16-AS1Q495Z4 193 aa6.66□□□□□ -1.34
HDAC9-228ENST00000524023 PLAC8Q9NZF1 115 aa6.65□□□□□ -1.34
HDAC9-228ENST00000524023 Q6ZR54 194 aa6.64□□□□□ -1.35
HDAC9-228ENST00000524023 ZNF861PO60384 105 aa6.64□□□□□ -1.35
HDAC9-228ENST00000524023 C8orf17Q9NRJ1 99 aa6.64□□□□□ -1.35
HDAC9-228ENST00000524023 ANAPC11Q9NYG5 84 aa6.63□□□□□ -1.35
HDAC9-228ENST00000524023 TGP01266 2768 aa6.62□□□□□ -1.35
HDAC9-228ENST00000524023 MEGF8Q7Z7M0 2845 aa6.62□□□□□ -1.35
HDAC9-228ENST00000524023 TP53AIP1Q9HCN2 124 aa6.62□□□□□ -1.35
HDAC9-228ENST00000524023 A0A1B0GVX0 72 aa6.61□□□□□ -1.35
HDAC9-228ENST00000524023 IGHV6-1A0A0B4J1U7 121 aa6.61□□□□□ -1.35
HDAC9-228ENST00000524023 ALMS1Q8TCU4 4167 aa6.59□□□□□ -1.35
HDAC9-228ENST00000524023 DNAH11Q96DT5 4516 aa6.58□□□□□ -1.36
HDAC9-228ENST00000524023 PSPHP1O15172 72 aa6.58□□□□□ -1.36
HDAC9-228ENST00000524023 CDK2AP2O75956 126 aa6.58□□□□□ -1.36
HDAC9-228ENST00000524023 DNAH6Q9C0G6 4158 aa6.58□□□□□ -1.36
HDAC9-228ENST00000524023 IGLV7-46A0A075B6I9 117 aa6.58□□□□□ -1.36
HDAC9-228ENST00000524023 V9GYY9 64 aa6.58□□□□□ -1.36
HDAC9-228ENST00000524023 DNAH5Q8TE73 4624 aa6.57□□□□□ -1.36
HDAC9-228ENST00000524023 NDUFS5O43920 106 aa6.57□□□□□ -1.36
HDAC9-228ENST00000524023 C1orf134Q5TEV5 83 aa6.57□□□□□ -1.36
HDAC9-228ENST00000524023 A0A087X002 238 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms