RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 OCIAD2Q56VL3 154 aa5.64□□□□□ -1.51
SDCBP-212ENST00000523483 C14orf132Q9NPU4 83 aa5.64□□□□□ -1.51
SDCBP-212ENST00000523483 ZNF706Q9Y5V0 76 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-212ENST00000523483 LINC01547P58512 204 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-212ENST00000523483 RYR1P21817 5038 aa5.62□□□□□ -1.51
SDCBP-212ENST00000523483 RBM3P98179 157 aaKnown RBP5.61□□□□□ -1.51
SDCBP-212ENST00000523483 MOBPQ13875 183 aa5.61□□□□□ -1.51
SDCBP-212ENST00000523483 TEN1Q86WV5 123 aa5.61□□□□□ -1.51
SDCBP-212ENST00000523483 HRCT1Q6UXD1 115 aa5.61□□□□□ -1.51
SDCBP-212ENST00000523483 IGLV5-48A0A075B6I7 105 aa5.61□□□□□ -1.51
SDCBP-212ENST00000523483 DSCR8Q96T75 97 aa5.61□□□□□ -1.51
SDCBP-212ENST00000523483 SPINK6Q6UWN8 80 aa5.6□□□□□ -1.51
SDCBP-212ENST00000523483 KRTAP17-1Q9BYP8 105 aa5.6□□□□□ -1.51
SDCBP-212ENST00000523483 A0A087X002 238 aa5.59□□□□□ -1.51
SDCBP-212ENST00000523483 Q8N1X5 172 aa5.59□□□□□ -1.51
SDCBP-212ENST00000523483 SMIM29Q86T20 159 aa5.59□□□□□ -1.51
SDCBP-212ENST00000523483 JMJD7-PLA2G4BH0Y9G9 81 aa5.58□□□□□ -1.52
SDCBP-212ENST00000523483 PRR26Q8N8Z3 221 aa5.58□□□□□ -1.52
SDCBP-212ENST00000523483 DMBT1Q9UGM3 2413 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-212ENST00000523483 CRYGAP11844 174 aa5.57□□□□□ -1.52
SDCBP-212ENST00000523483 H3BQ85 93 aa5.57□□□□□ -1.52
SDCBP-212ENST00000523483 KRTAP10-4P60372 401 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-212ENST00000523483 CCKP06307 115 aa5.57□□□□□ -1.52
SDCBP-212ENST00000523483 PPDPFLQ8WWR9 84 aa5.56□□□□□ -1.52
SDCBP-212ENST00000523483 KRTAP4-5Q9BYR2 181 aa5.55□□□□□ -1.52
SDCBP-212ENST00000523483 KRTAP1-4P0C5Y4 121 aa5.55□□□□□ -1.52
SDCBP-212ENST00000523483 SPRR1BP22528 89 aa5.55□□□□□ -1.52
SDCBP-212ENST00000523483 TYMSOSQ8TAI1 123 aa5.55□□□□□ -1.52
SDCBP-212ENST00000523483 MYCBP2O75592 4640 aa5.54□□□□□ -1.52
SDCBP-212ENST00000523483 LINC00483Q53H64 154 aa5.54□□□□□ -1.52
SDCBP-212ENST00000523483 IGFL1Q6UW32 110 aa5.54□□□□□ -1.52
SDCBP-212ENST00000523483 BIRC6Q9NR09 4857 aa5.53□□□□□ -1.52
SDCBP-212ENST00000523483 LRP1Q07954 4544 aaKnown RBP5.53□□□□□ -1.52
SDCBP-212ENST00000523483 KRTAP13-2Q52LG2 175 aa5.53□□□□□ -1.52
SDCBP-212ENST00000523483 Q8NBF4 154 aa5.53□□□□□ -1.52
SDCBP-212ENST00000523483 J3QR89 54 aa5.51□□□□□ -1.53
SDCBP-212ENST00000523483 C4orf48Q5BLP8 95 aa5.51□□□□□ -1.53
SDCBP-212ENST00000523483 Q6ZQT0 140 aa5.51□□□□□ -1.53
SDCBP-212ENST00000523483 A0A087WSZ3 146 aa5.51□□□□□ -1.53
SDCBP-212ENST00000523483 TRBV7-4A0A0J9YYF1 115 aa5.51□□□□□ -1.53
SDCBP-212ENST00000523483 Q6JHZ5 121 aa5.5□□□□□ -1.53
SDCBP-212ENST00000523483 A0A1W2PNM2 257 aa5.5□□□□□ -1.53
SDCBP-212ENST00000523483 FAM229BQ4G0N7 80 aa5.5□□□□□ -1.53
SDCBP-212ENST00000523483 OBSCN-AS1Q96MR7 158 aa5.5□□□□□ -1.53
SDCBP-212ENST00000523483 K7ERU9 68 aa5.49□□□□□ -1.53
SDCBP-212ENST00000523483 LINC01600Q96MT4 127 aa5.48□□□□□ -1.53
SDCBP-212ENST00000523483 PDE6GP18545 87 aa5.48□□□□□ -1.53
SDCBP-212ENST00000523483 LOC110117498A0A087WWA1 95 aa5.47□□□□□ -1.53
SDCBP-212ENST00000523483 DEFB116Q30KQ4 102 aa5.47□□□□□ -1.53
SDCBP-212ENST00000523483 SSBP3-AS1Q7Z2R9 100 aa5.47□□□□□ -1.53
SDCBP-212ENST00000523483 LINC00304Q8N9R0 145 aa5.46□□□□□ -1.53
SDCBP-212ENST00000523483 IGLV8-61A0A075B6I0 122 aa5.46□□□□□ -1.54
SDCBP-212ENST00000523483 LINC00846Q9NV44 126 aa5.46□□□□□ -1.54
SDCBP-212ENST00000523483 NREPQ16612 68 aa5.44□□□□□ -1.54
SDCBP-212ENST00000523483 ABCA13Q86UQ4 5058 aa5.44□□□□□ -1.54
SDCBP-212ENST00000523483 HERC2O95714 4834 aa5.44□□□□□ -1.54
SDCBP-212ENST00000523483 UBL5Q9BZL1 73 aa5.44□□□□□ -1.54
SDCBP-212ENST00000523483 TRBV7-7A0A0K0K1E9 115 aa5.43□□□□□ -1.54
SDCBP-212ENST00000523483 J3QL48 77 aa5.42□□□□□ -1.54
SDCBP-212ENST00000523483 RETNLBQ9BQ08 111 aa5.42□□□□□ -1.54
SDCBP-212ENST00000523483 IGKV3D-7A0A0C4DH55 119 aa5.4□□□□□ -1.54
SDCBP-212ENST00000523483 Q6ZVQ6 151 aa5.4□□□□□ -1.54
SDCBP-212ENST00000523483 ACYP1P07311 99 aa5.4□□□□□ -1.55
SDCBP-212ENST00000523483 SIGMAR1Q99720 223 aa5.4□□□□□ -1.55
SDCBP-212ENST00000523483 SS18L2Q9UHA2 77 aa5.39□□□□□ -1.55
SDCBP-212ENST00000523483 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
SDCBP-212ENST00000523483 SPINK1P00995 79 aa5.39□□□□□ -1.55
SDCBP-212ENST00000523483 FAM240AA0A1B0GVK7 77 aa5.38□□□□□ -1.55
SDCBP-212ENST00000523483 Q8N9L7 120 aa5.38□□□□□ -1.55
SDCBP-212ENST00000523483 BPY2O14599 106 aa5.37□□□□□ -1.55
SDCBP-212ENST00000523483 LIMD2Q9BT23 127 aa5.37□□□□□ -1.55
SDCBP-212ENST00000523483 IGKV4-1P06312 121 aa5.37□□□□□ -1.55
SDCBP-212ENST00000523483 KRTAP10-8P60410 259 aa5.37□□□□□ -1.55
SDCBP-212ENST00000523483 SPAG11AQ6PDA7 123 aa5.37□□□□□ -1.55
SDCBP-212ENST00000523483 Q6Q795 121 aa5.36□□□□□ -1.55
SDCBP-212ENST00000523483 FAT3Q8TDW7 4589 aa5.36□□□□□ -1.55
SDCBP-212ENST00000523483 HIST1H4AP62805 103 aaKnown RBP5.36□□□□□ -1.55
SDCBP-212ENST00000523483 CD164Q04900 197 aa5.36□□□□□ -1.55
SDCBP-212ENST00000523483 CDIP1Q9H305 208 aa5.36□□□□□ -1.55
SDCBP-212ENST00000523483 MT1HL1P0DM35 61 aa5.35□□□□□ -1.55
SDCBP-212ENST00000523483 OXTP01178 125 aa5.35□□□□□ -1.55
SDCBP-212ENST00000523483 C21orf62-AS1Q17RA5 79 aa5.35□□□□□ -1.55
SDCBP-212ENST00000523483 A0A1B0GW54 56 aa5.33□□□□□ -1.56
SDCBP-212ENST00000523483 MT-ATP8P03928 68 aa5.33□□□□□ -1.56
SDCBP-212ENST00000523483 LINC00643Q86TS7 51 aa5.33□□□□□ -1.56
SDCBP-212ENST00000523483 PCLOQ9Y6V0 5065 aa5.33□□□□□ -1.56
SDCBP-212ENST00000523483 TNXBP22105 4242 aa5.33□□□□□ -1.56
SDCBP-212ENST00000523483 IGHV6-1A0A0B4J1U7 121 aa5.32□□□□□ -1.56
SDCBP-212ENST00000523483 C1orf195Q5TG92 126 aa5.32□□□□□ -1.56
SDCBP-212ENST00000523483 PRR4Q16378 134 aa5.32□□□□□ -1.56
SDCBP-212ENST00000523483 LINC00472Q9H8W2 130 aa5.31□□□□□ -1.56
SDCBP-212ENST00000523483 KRTAP29-1A8MX34 341 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-212ENST00000523483 K7EQZ3 153 aa5.31□□□□□ -1.56
SDCBP-212ENST00000523483 NDUFB1O75438 58 aa5.3□□□□□ -1.56
SDCBP-212ENST00000523483 A0A087WVE0 104 aa5.3□□□□□ -1.56
SDCBP-212ENST00000523483 Q96NJ1 140 aa5.3□□□□□ -1.56
SDCBP-212ENST00000523483 C9orf92A6NGG3 77 aa5.29□□□□□ -1.56
SDCBP-212ENST00000523483 DSCR10P59022 87 aa5.29□□□□□ -1.56
SDCBP-212ENST00000523483 WFDC13Q8IUB5 93 aa5.27□□□□□ -1.57
SDCBP-212ENST00000523483 J3KT08 172 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 534.1 ms